Ceratina calcarata (carpenter bee): 108622297
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Entry
108622297 CDS
T06061
Name
(RefSeq) flap endonuclease GEN isoform X1
KO
K15338
holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
Organism
ccal
Ceratina calcarata (carpenter bee)
Brite
KEGG Orthology (KO) [BR:
ccal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccal03400
]
108622297
DNA repair and recombination proteins [BR:
ccal03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
108622297
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
XPG_I
Chromo_2
XPG_N
A2L_zn_ribbon
Motif
Other DBs
NCBI-GeneID:
108622297
NCBI-ProteinID:
XP_017875578
UniProt:
A0AAJ7IS13
LinkDB
All DBs
Position
Unknown
AA seq
722 aa
AA seq
DB search
MGVKDLWNIVSPLCDRKPLFELQGKTIAIDISCWIVDSQTITDPSMQPKMYLRNLYFRTA
FLLMHEISPVFVLEGKAPTLKHNTIAKRNNIRSGNQERNTVHRRGRTYFNRILKECKEML
DYMGLACVQGHGEAEAMCAYLNEDGLVDGCISQDSDCFLYGAKVVYRNFCTSAQGNRGGS
GGAVDEYSLEKIERVLGLGRNKMIALALLCGCDYDEGLNGIGKEAAMKFFKLVEDKNVLE
RLKSWKTDKTLDLVEKELSNPNLCTSCGHSGKVQKHTKSGCIDCGTVVKCNDSYRERRAL
LLNEIGLRKKTLFVEGFPNQELIDEFLIRKDPVPTKVDIQWKQPQISKFIKFMEKHLSWE
PQYAFEKIFPLATRWQVVHLPNISISHRVLMPDLFVPDTIKKIRNIRCVASYEIIWNNNH
YIVEELRERVAANEKSDDDDDVDDLIELTSIEPQDAVQKCYPELVEVFENAKNAKKRKTK
KKTRNAEDNGERKAEKRRQKKKEKNILDDVENNRKIDEFISKNPPASLEESFESLTISPK
RSKKTGSREGQKGNNKKKRGPQINKVLQLENINSRCNDTLDRMFNELSPDDFLTDNDDHD
LNVSEIIDDICSRKVFQYNVTKDVQTFADEKAICGGTIENVETINRDVSIQAKSDRYQEN
QSSGEKSGFIDEFADLSESYVPLYERIATRTRSKDSRRTSRKTNHRFSFGFEALMNDTVP
EV
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atgggtgtaaaagatctctggaatattgtatcgcctttgtgcgatagaaagccattgttt
gagctacaagggaagacaatagccatcgatataagttgttggatcgtggatagtcaaact
atcactgatccctccatgcaaccaaaaatgtaccttaggaatctgtattttcgtacagcc
tttctccttatgcatgaaatatcaccagtatttgtgttagaagggaaagcacctactttg
aagcataatacaattgcaaaaagaaataatattcgtagtggaaatcaggaaagaaatact
gtgcatagaagagggagaacatatttcaataggattctgaaagagtgtaaagaaatgctc
gattacatggggctagcatgcgtccaagggcatggagaggcggaagcaatgtgtgcttat
ttaaatgaagatgggcttgttgatggatgcataagccaggacagtgattgtttcttatat
ggagcgaaggtggtttatagaaatttttgtacaagtgctcaaggaaatcgtggaggttcg
ggtggtgcagtggacgaatacagtttagaaaagatagaaagagtgttaggtcttggaaga
aacaaaatgatagcgttagctctgttgtgcggctgtgattacgatgaaggattaaatggt
attggcaaggaagctgctatgaagttcttcaaacttgtagaagacaagaatgttcttgaa
cgtttaaaaagttggaaaacagataagacgttagatcttgtagagaaagaattatcaaat
ccaaatttgtgcacatcttgtggtcatagtgggaaggtgcagaagcacacgaaatcaggt
tgcatagattgtggaacagttgtgaaatgcaatgactcttatagagagagaagagcatta
ttattaaatgagattggtttgcgaaagaagacactttttgttgaaggtttcccaaaccaa
gaattaatagatgaatttcttattaggaaagacccagtgcctaccaaagtagatatacag
tggaaacaaccacaaattagtaaattcataaaattcatggagaagcatttgtcttgggaa
ccgcagtacgcgttcgaaaaaatatttcctcttgctacacgttggcaggtcgtgcacttg
ccgaatatttctattagccaccgtgttttaatgcccgatttgtttgtacctgatacgata
aaaaaaattagaaacatcaggtgcgttgcgagttacgaaattatttggaataataatcat
tacatagtagaagaattacgagaacgcgtagcggcgaatgaaaagagcgacgacgatgac
gacgtagatgatctgatcgagttaacgagcatcgaaccgcaagatgctgtacaaaaatgt
tatccagagttagtcgaagtatttgaaaatgcgaagaatgctaagaaacgaaagactaag
aaaaaaacgcgaaatgccgaagataatggtgaacgcaaagcagaaaaaagacgtcagaag
aaaaaggaaaaaaatattttagacgatgttgaaaataataggaagatcgacgaattcata
tcgaaaaatcctcccgcgtcgttagaagagtcttttgaaagtctgactatttcaccgaaa
agatctaagaaaacaggctcacgagaaggtcaaaaaggaaataataaaaagaaacgcgga
cctcagattaataaagtattacaattggaaaatatcaattcgagatgcaatgacacgcta
gatagaatgtttaatgaactttccccagatgattttctcaccgacaacgacgatcacgat
ttaaacgtatcagaaataatcgacgatatatgcagtagaaaagtttttcaatataacgtt
acgaaagatgtgcaaacgtttgcagatgagaaagctatatgtggaggaaccattgagaac
gtagaaacgattaatcgagatgttagtattcaggcgaaatctgatcggtaccaagaaaat
caatcttctggagagaaatctggattcattgacgaatttgccgatttaagcgaatcatat
gttccgctatatgaaagaattgcaactcgcacccggagtaaagattcgaggagaacgtct
agaaaaacaaatcatagatttagctttgggtttgaggccctcatgaatgataccgttcca
gaagtctaa
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