Ceratina calcarata (carpenter bee): 108622345
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Entry
108622345 CDS
T06061
Name
(RefSeq) DNA repair and recombination protein RAD54B-like isoform X1
KO
K10877
DNA repair and recombination protein RAD54B [EC:5.6.2.-]
Organism
ccal
Ceratina calcarata (carpenter bee)
Pathway
ccal03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ccal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
108622345
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccal03400
]
108622345
DNA repair and recombination proteins [BR:
ccal03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
108622345
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
HDA2-3
ERCC3_RAD25_C
SWI2_SNF2
ZGRF1-like_N
AAA_34
Motif
Other DBs
NCBI-GeneID:
108622345
NCBI-ProteinID:
XP_017875654
UniProt:
A0AAJ7ISB7
LinkDB
All DBs
Position
Unknown
AA seq
811 aa
AA seq
DB search
MYRKPSTSFKQSVKSAEQTFVRNTSTILNLFKKPVKDSNEAVQTENVPNIKDENNIASVK
NSPIIGNNKVTFNVVIGKRSNRKHKIWEDDGTLEVIGKQAVLKDAEGNVIQRTTVNPETL
EEGFRMCISNKEIEIIDRVTSECLPTKSEQEKIIEPPPKKLKTSNSKSSLPLASLHKDLK
LGHESLIMPSISESKEWTEDAVSENEIEVSVDACLANILRPHQRYGVIFLYECIMGMKVP
NYFGAILADDMGLGKTLQCITVIWTLLKKGPYRRPILKNALIVTPSSLCNNWNKEFKNWL
GFHRICPYVVDGKNKPNAFKKQIRNSVMIISYDMLIRCEEEIGQINFDLIVCDEGHRLKN
SNIKAAKILTSFNCKRKILLTGTPIQNDLQEFFTLVDFVNSGILGKYSEFKSYYENSIVS
SQCPNATSQVVSLGRERANELQEKTKCFILRRTQETINKYLPSKHELIIFCRLSDEQKDL
YSQVTDSWFVKSSSDNSIPHLTVITALKKICNHPELFYNDKNELLSDLKRDKISDARRIT
MKDYCGKVSIVRTILRNLKNTNEKLVLISYYTQTLDLLENVCNMESLEFLRLDGSTTSNA
RLQIVERFNSRTDSSKVFLLSAKAGGVGLNLPGASRLILFDSDWNPASDSQAMARIWRDG
QKKDVHIIRLLTTGTIEEKIFQRQISKAGLSETIIDSKSFASLKLSMSELKDLFTLTTDT
NSSTHDLMKCSCNGYTEMDESLEEPQQKNDREYQLLLKDEESKSNLTINQLLKWEHYQQP
IPDKIIQEIMLSEISDNITFILKHSILKKMD
NT seq
2436 nt
NT seq
+upstream
nt +downstream
nt
atgtatcgtaaaccgagcaccagttttaagcagagtgtgaaaagcgcagagcaaactttt
gtcaggaatacttcgacaattctcaatttatttaagaaacctgttaaagattctaatgaa
gcagtacagacagagaatgttccaaatatcaaagatgaaaacaatattgcttctgttaaa
aattcacccattattggtaataataaagttacttttaatgtagtaataggcaaaagatct
aataggaaacataagatatgggaggatgatggaacattagaagtcatagggaaacaagca
gttttgaaagatgcagaaggtaatgttatccagagaaccacagttaatccagaaactctt
gaagagggatttagaatgtgcataagcaataaagaaattgagataattgatagagtaaca
tctgaatgtctgcctactaaatctgaacaagaaaaaattatagaaccacccccaaaaaag
ttaaaaacgtccaattctaaatctagtcttccattagcatctttgcataaagatttaaaa
ttgggacatgagtcattgataatgccttccataagtgaatcgaaagagtggaccgaggat
gctgtatcagaaaatgaaatagaagtatctgtagatgcttgtttggcaaatatacttaga
ccacaccagcgttatggtgttatatttttatatgaatgtattatgggaatgaaagtaccc
aattattttggagcgattttggctgatgatatgggtcttggaaaaacattacagtgcatc
acagtcatttggactctgctaaaaaagggaccatatagacgtccaatattgaagaatgca
ttgatagtaactcctagtagtctttgtaacaattggaataaagagtttaagaactggttg
ggttttcatagaatatgtccatatgtagtggacgggaaaaataaaccaaatgcttttaaa
aagcaaataagaaattcagttatgatcattagctatgacatgcttatcagatgtgaagaa
gaaatcgggcaaatcaattttgatttgattgtatgtgatgaaggccatagattaaaaaac
agtaatataaaagcagcgaagattttgactagctttaattgtaaaagaaaaattcttctg
actggaactcccatacaaaacgatttacaagaatttttcactttggttgattttgtaaat
tctggtatactgggcaaatattctgaattcaaaagttattacgaaaattctattgtatcg
tcacagtgtcccaacgcaacgtctcaagttgtatcccttgggcgtgaaagagctaatgaa
ttgcaagagaaaacgaaatgttttatattaaggcgcacacaagaaacaatcaataaatat
ttgccttctaaacatgaattaatcatattctgtcgtttgtcagacgagcagaaagactta
tattcccaagtcacggactcttggttcgtcaaaagttcatctgataatagtataccgcat
ttaacagtaataacagctcttaaaaaaatttgtaatcatcccgaattattttacaacgac
aagaatgaacttcttagtgatttgaagagagataaaatttctgatgcaagacgtatcaca
atgaaagactattgtgggaaagtttcgattgtacgaacaatattgagaaacttaaaaaat
acaaatgagaaactagtattaatttcatattatacacaaacattggacttattagaaaat
gtttgcaatatggaaagtttagaatttcttagattggacggtagtacaaccagtaacgca
agactgcagattgtagaacgatttaattcacggaccgatagcagcaaagtatttttatta
agcgcgaaggctggcggtgttggactgaatttacccggtgcgtccaggcttatattattt
gattccgactggaatccagcgtctgattcgcaagctatggcaagaatttggagggatggc
caaaagaaggatgttcatataatacgattactgacaacaggtactatcgaggaaaaaatt
tttcaaaggcaaattagcaaagcaggcttaagcgagactataatagactcaaagtctttt
gcttcacttaaattgtccatgagtgaattaaaggatttatttacgttaacgacggatacg
aattcttcaacacacgatttaatgaagtgttcttgtaatgggtacacagagatggatgaa
tctttggaagaaccacagcaaaaaaatgatagagagtatcagctcctcttaaaagatgaa
gaatcaaaatcaaatctgactataaatcagcttttgaaatgggaacattatcagcagccg
attcccgataaaataattcaagaaattatgttatcagaaatatctgataatataactttt
atattgaaacattctatattaaaaaagatggattaa
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