Ceratina calcarata (carpenter bee): 108622389
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Entry
108622389 CDS
T06061
Name
(RefSeq) ribonucleases P/MRP protein subunit POP1 isoform X1
KO
K01164
ribonuclease P/MRP protein subunit POP1 [EC:
3.1.26.5
]
Organism
ccal
Ceratina calcarata (carpenter bee)
Pathway
ccal03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ccal00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
108622389
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ccal03009
]
108622389
03016 Transfer RNA biogenesis [BR:
ccal03016
]
108622389
03029 Mitochondrial biogenesis [BR:
ccal03029
]
108622389
Enzymes [BR:
ccal01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.5 ribonuclease P
108622389
Ribosome biogenesis [BR:
ccal03009
]
Eukaryotic type
Pre-60S particles
RNases
RNase MRP
108622389
Transfer RNA biogenesis [BR:
ccal03016
]
Eukaryotic type
5'processing factors
Ribonucrease P
108622389
Mitochondrial biogenesis [BR:
ccal03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
RNase MRP
108622389
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
POP1_C
POP1_N
POPLD
GCV_T_C
RRM_1
Motif
Other DBs
NCBI-GeneID:
108622389
NCBI-ProteinID:
XP_017875738
UniProt:
A0AAJ7ISV6
LinkDB
All DBs
Position
Unknown
AA seq
824 aa
AA seq
DB search
MAGRKEQFDEFLGGSEQLPPEIHIMKLVSARASEIAAMTYSIENPQQTKLVFQKLPVYMR
RRVMSHNMKRLPRRLQEAHLSQMTKSGLPPKAKRPSRKYRRRPRNLLAEYNRRQRNKIWL
ETHIWHAKRFHMVEKWGYRIASFANDKCFRANYRAVARHCLMQDISYYTCVEISGPEQVL
KETLKTHCNPCETTFAAKIFTTGQREGTVMFFKKNSYPRFPIGHVHFLWRPSQSTIKTIW
IWVHPSFIDDFIAEITFSFEFKCINSTSENSQSAKCTSFINERDCKLIIHRGTLNRFRFY
GPLTMNVLTNAFHVPNFDATKFEDNQMDCDEEAKNSDKLWHVDYYNNQEHRESLKVQKNL
WQMLKSLQSPSQLPPNIVLGFTVLDPRFYLPDKRTKLQRQMRTINAMPIPPANANASPIW
EQEIRQKVSRICATTSAINKLRSQCLVPGTSNDKYFDEQIMAKIPILLIQRPGIGTTGLG
SGVDIIVPSNWAMPFWLACILRCVRIGALRESTSIAFEYQNMRSPDINDPDTPAYERQAL
STRLDLRAKYFRYPPNRRVNFVKFGISSPFFCEWKLLMKEWTGTEEFSVLRNRKLIQLLH
RSLTQGVYKRKCNKSSSHALNIQDAFEDYNYLVRVKVSILKKGCPKRFAIISMPTDEDVE
KFKNSKTWSGPVEKLNIDPNESARKILRKNHSALLKRLKRQRIRYKKASTSKLSELLNGQ
LESSNYVDKSKKLLQVSREAVNKQSQRMSEFYLPDCNRVRFSCDREIIGYVTIGDFSFSE
AKGIGSGYVTLNSLIELINKQYPIVLVRNIQTRQYRIAKLEVTI
NT seq
2475 nt
NT seq
+upstream
nt +downstream
nt
atggcgggaagaaaagaacagttcgatgaatttctgggtggatccgagcagttaccacca
gaaattcatattatgaagcttgtctccgcgagagcaagcgaaattgctgcaatgacgtat
tctatagaaaatcctcagcaaacgaaactcgtatttcaaaaactaccggtgtatatgcgt
aggcgcgtcatgtcgcacaacatgaaacgcttaccgcgtcgattgcaagaagcgcattta
agtcaaatgaccaaatccggtttgccgccaaaagctaaaagaccatcgcgcaaatatcgc
agacgtccgcgcaatttacttgccgaatataatcggagacaaaggaataaaatttggctg
gagactcacatttggcacgccaaacgttttcatatggtagaaaagtggggctacagaata
gccagttttgcaaatgacaaatgcttcagagccaattatcgtgccgttgcacgtcactgc
ttgatgcaagacatttcatattacacgtgcgtggaaattagcggcccggaacaagtccta
aaagagacactaaaaacgcattgtaatccatgtgaaacaacattcgcggcaaagattttt
acaacaggacaacgcgagggtacagtcatgttttttaagaagaatagctaccctcgattt
ccgattggacatgtacattttttatggagacccagtcaatctactataaaaactatttgg
atttgggtacatccatctttcattgacgactttatcgcggaaattacatttagctttgaa
ttcaagtgcataaattccacctctgagaatagtcaatcggcaaaatgtacctcttttatc
aatgaaagagattgtaaattgattattcataggggtacccttaaccggtttcggttttat
ggaccattaacaatgaacgttttgacgaatgcttttcacgtgccgaatttcgacgccaca
aaatttgaagataatcaaatggattgcgatgaggaagctaaaaattctgataaattgtgg
catgttgactattacaataatcaagaacatagagaatcgttaaaagtacaaaaaaattta
tggcaaatgttaaaatcgctacaatcccctagtcaattgccgccaaatattgttcttggt
tttaccgtcttagatccaagattttatttacctgataaaagaactaaactccaaagacag
atgcggacaattaatgcaatgccaattccacctgcaaacgcaaatgctagtccaatttgg
gaacaggagattagacagaaagtcagtaggatatgtgcaacgacaagtgcaattaataaa
ttgagaagtcaatgtttggtacctggtacgagcaatgacaaatattttgacgaacaaatt
atggcgaagatccctattctattgattcaaagacctggcattggaacgacaggtttaggt
tctggagtagacattattgtgccatccaactgggcaatgccattctggctagcttgcata
cttcgatgcgtaagaattggcgcgctcagagaatcaacatctatagcatttgaataccaa
aatatgcgatcaccggatatcaatgatccagacacacctgcttacgagaggcaagcattg
agtactaggctagacttaagggcaaaatattttcgttatccaccgaatagacgagtgaac
tttgttaaattcgggatttctagccctttcttttgcgaatggaaacttttgatgaaagaa
tggacaggcacagaagaattttccgtactgagaaatcgtaaattaatacaactgttacat
cgaagtttgactcaaggagtttataaacggaaatgcaataaatcaagtagccatgcgtta
aatatacaagacgcattcgaagactacaattatttagttcgcgttaaagtatccattctg
aaaaagggatgccctaaacgatttgcgattatatctatgccaactgatgaagatgtagaa
aaatttaagaatagtaaaacgtggtcgggtccagtagagaaattaaacattgacccaaat
gaaagcgccaggaagatattacggaaaaatcattcggctcttttgaaacggttaaagaga
caaagaatacgatacaaaaaagcatcaactagtaaattaagtgaattgttgaacggtcaa
cttgaaagctccaactatgtcgacaagtcaaaaaaattgttacaagtaagccgcgaagct
gtaaataaacaatctcaacgaatgtcagagttctatttaccagactgtaatcgggtacga
ttttcctgtgatagagaaattataggatacgtgacaataggtgatttttcgttttcagag
gcaaaagggataggttcaggatatgtaacattaaattccttaattgaattgataaataaa
cagtatcctattgttctagttaggaatattcagacaagacagtacagaattgccaagttg
gaagtgacaatttag
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