Ceratina calcarata (carpenter bee): 108622502
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Entry
108622502 CDS
T06061
Name
(RefSeq) replication factor C subunit 2-like
KO
K10755
replication factor C subunit 2/4
Organism
ccal
Ceratina calcarata (carpenter bee)
Pathway
ccal03030
DNA replication
ccal03410
Base excision repair
ccal03420
Nucleotide excision repair
ccal03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ccal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
108622502
03410 Base excision repair
108622502
03420 Nucleotide excision repair
108622502
03430 Mismatch repair
108622502
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ccal03032
]
108622502
03036 Chromosome and associated proteins [BR:
ccal03036
]
108622502
03400 DNA repair and recombination proteins [BR:
ccal03400
]
108622502
DNA replication proteins [BR:
ccal03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
108622502
DNA Replication Termination Factors
ELG1-RFC complex
108622502
Chromosome and associated proteins [BR:
ccal03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
108622502
DNA repair and recombination proteins [BR:
ccal03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
108622502
Check point factors
HRAD17(Rad24)-RFC complex
108622502
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_22
AAA_14
AAA_16
Mg_chelatase
Rad17
AAA_24
RuvB_N
AAA_18
Viral_helicase1
AAA_11
nSTAND3
AAA_19
NTPase_1
AAA_5
MipZ
AAA_assoc_2
ABC_tran
MeaB
AAA_28
RCF1-5-like_lid
RNA_helicase
AAA_25
DUF851
IstB_IS21
AAA_2
CbiA
AAA_3
Motif
Other DBs
NCBI-GeneID:
108622502
NCBI-ProteinID:
XP_017875908
UniProt:
A0AAJ7ISY9
LinkDB
All DBs
Position
Unknown
AA seq
331 aa
AA seq
DB search
MGIENGDNNLMDIEICPSTSGKDNRSKADDRKSLHLPWIEKYRPQVFSDIVGNEDTVQRL
SVFAKNGNCPNIIIAGPPGVGKTTTVLCLARILLGPVFKDAVLELNASNDRGIDVVRNKI
KMFAQKKVNLPSGKHKIIILDEADSMTEGAQQALRRTMEIYSNTTRFALACNNSEKIIEP
IQSRCAMSSYTDDGLEAIVFTAQGDMRQAMNNLQSTHNGFGHINSANVFKVCDEPHPLLV
KEMLEHCIERNICKAYRVMEYLWSMGYSAEDLIGNIFRVCKNLPIEEKIKLDFIREIGIT
HLGIVDGISSLLQMNSLLARLCCRASELNKS
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atggggattgaaaacggtgacaataatttgatggatattgaaatttgtccgtcgaccagt
ggaaaggacaacagaagcaaggcagatgatagaaaatcgttgcatttaccatggattgaa
aaataccgaccacaggtgttctcagacattgttggaaatgaggacacagtgcagagactc
tcagttttcgctaaaaatgggaactgtcctaatatcatcattgccggaccaccaggagtt
ggcaaaacaacaaccgtactatgtttggcacgaattttgctcggtccagttttcaaagat
gcagtattagaattaaatgcctctaatgatcgaggaatagatgttgttaggaacaagatt
aaaatgtttgcccagaaaaaggtaaatctaccaagtggaaagcataagataataatttta
gatgaagctgatagtatgacagaaggggctcaacaagcgttacgtaggacaatggaaatt
tacagcaataccacaagattcgcattggcttgtaacaatagtgagaaaattattgagcct
attcaatcacgttgcgcgatgtcttcctataccgacgacggtttagaggccatagtgttc
actgcccagggtgatatgaggcaagcaatgaacaatttacagtccacacacaatggcttt
ggccatataaacagtgcaaacgttttcaaagtatgcgatgaaccacacccgttattagtt
aaggaaatgctcgaacattgtatagaaagaaatatatgtaaagcttatagggtaatggag
tacctgtggagtatgggatattctgcagaagatctgattggcaacatatttcgagtttgc
aaaaatttacctattgaggagaaaataaaattagattttatacgagaaattggtatcact
catctgggaatagtggatgggatcagcagcttattgcaaatgaacagccttctggcacga
ctttgttgcagagcttcggaattgaacaaatcctaa
DBGET
integrated database retrieval system
