KEGG   Ceratina calcarata (carpenter bee): 108622519
Entry
108622519         CDS       T06061                                 
Name
(RefSeq) WD40 repeat-containing protein SMU1
  KO
K13111  WD40 repeat-containing protein SMU1
Organism
ccal  Ceratina calcarata (carpenter bee)
Brite
KEGG Orthology (KO) [BR:ccal00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ccal03041]
    108622519
Spliceosome [BR:ccal03041]
 Complex B
  Other components
   Complex B specific factors
    108622519
SSDB
Motif
Pfam: WD40 WD40_WDHD1_1st WD40_Prp19 Beta-prop_EML_2 WD40_CDC20-Fz Beta-prop_TEP1_2nd WDR55 WD40_MABP1-WDR62_2nd EIF3I Beta-prop_EML Beta-prop_CAF1B_HIR1 ANAPC4_WD40 Beta-prop_WDR75_1st Beta-prop_WDR90_POC16_2nd Beta-prop_RIG_2nd WDR90_beta-prop_4th LisH_TPL NBCH_WD40 Beta-prop_TEP1_C Beta-prop_Nup120_160 Beta-prop_DCAF4 Ge1_WD40 Beta-prop_Vps41 WD40_MABP1-WDR62_1st Beta-prop_SPT8 Beta-prop_WDR35_TULP_N Beta-prop_NUP159_NUP214 Beta-prop_IFT140_1st Beta-prop_NWD2_C Beta-prop_IFT122_1st Beta-prop_HPS5 Beta-prop_EIPR1 Beta-prop_WDR19_1st Beta-prop_SCAP WD40_RFWD3 Beta-prop_VPS8 Beta-prop_DCAF12 Beta-prop_IP5PC_F Beta-prop_WDR75_2nd WD_LRWD1 PROPPIN VPS8_N WD40_like LisH_WDR26 DUF7165 zf_topless
Other DBs
NCBI-GeneID: 108622519
NCBI-ProteinID: XP_017875932
UniProt: A0AAJ7IT67
LinkDB
Position
Unknown
AA seq 510 aa
MSIEIESADVIRLIQQYLKESNLVKTLQTLQEETGVSLNTVDSVDGFVADINNGHWDTVL
KAIQSLKLPDKKLIDLYEQVVLELIELRELGAARSLLRQTDPMIMMKQQEPERYIHLENL
LARSYFDPREAYPDGSTKEKRRAYIATALAGEVSVVPSSRLLALLGQALKWQQHQGLLPP
GTTIDLFRGKAAVRDQEDEKYPTQLSKQIKFGQKSHVECARFSPDGQYLVTGSVDGFIEV
WNFTTGKIRKDLKYQAQDNFMMMEQAVLSMAFSRDSEMLASGGQDGKIKVWRVQSGQCLR
RFEKAHSKGVTCLQFSRDNSQILSASFDTTIRIHGLKSGKTLKEFRGHASFVNEVVFAPD
GHNVISASSDGTVKVWSLKTTECIGTYKSLGAADLTVNSIHVLPRNPEHFVVCNRSNTVV
IMNMQGQIVRSFSSGKREGGDFVCTVVSPRGEFIYCVGEDLVLYCFSTSSGKLERTLNIH
EKDVIGLTHHPHQNLLCSYSEDGLLKLWKP
NT seq 1533 nt   +upstreamnt  +downstreamnt
atgtcgattgaaattgaatctgcggatgtaattcgtttgatacaacagtaccttaaagaa
tcaaatctcgtgaaaacattacaaacgttacaggaagaaacaggagtatcattgaataca
gtagacagcgtggatggttttgtagcagatataaacaatggacactgggacactgttttg
aaagcgatacagtcattaaagttaccagataagaagctcattgatttatatgaacaggtc
gttctggaattgattgaactgagagaattaggagcagcacgatcactgttgagacaaaca
gatcctatgataatgatgaaacaacaggaacctgaaagatatattcatttagaaaattta
cttgcacgttcgtactttgatccacgagaggcatatcctgatggaagtacaaaagaaaaa
agaagggcttatatagctacagctttagctggcgaggtatctgtcgtaccttccagcagg
ctactcgcgctcttaggacaagcattgaaatggcaacagcaccaggggttacttcctcct
ggtacaacgatagatttgttcagaggaaaggcagcagtaagggatcaagaggatgaaaaa
tatcccacgcaactctcgaagcaaatcaagttcggtcagaaatctcacgtcgaatgcgca
cgattttcacctgacggtcaatacctggtcactggatcggtcgatggatttatcgaagtg
tggaatttcacgactggtaaaatcagaaaggacttgaaataccaagctcaagacaatttc
atgatgatggaacaagcagtattatcgatggcgttcagtcgcgacagcgagatgttagcc
agtggtggacaagatggaaagataaaagtatggagggttcagagcgggcagtgcttgaga
agattcgagaaagcacattcgaaaggtgtcacgtgcctccagttcagcagggacaatagc
caaattttatccgcatcgttcgatactactataaggatacatggacttaagtctggtaag
actttgaaagagtttcgtggacatgcttcttttgtaaatgaagtagtcttcgccccggat
ggacacaacgtgataagcgcgtcttcggatggaaccgtgaaagtttggagtttaaagacg
acagagtgcataggcacttataaatctttaggagctgccgatttaactgtaaatagtata
cacgttcttccgcgaaaccccgaacatttcgtcgtgtgcaatcgttcgaacactgtggta
attatgaacatgcaagggcaaatagttagatcgttctcgagtggtaaaagagagggtggt
gatttcgtgtgtaccgtggtaagtcctcgaggtgagttcatttactgcgtcggcgaagat
cttgtcctttattgtttctccacatcctccggaaaactggaaagaactctcaacatacac
gaaaaagatgtcataggtttgacgcatcatcctcaccaaaaccttttatgctcctacagc
gaagatggtcttttaaagttgtggaaaccgtaa

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