Ceratina calcarata (carpenter bee): 108622604
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Entry
108622604 CDS
T06061
Name
(RefSeq) homeobox protein SIX2-like
KO
K15615
homeobox protein SIX4
Organism
ccal
Ceratina calcarata (carpenter bee)
Brite
KEGG Orthology (KO) [BR:
ccal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccal03000
]
108622604
Transcription factors [BR:
ccal03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain SINE
108622604
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SIX1_SD
Homeodomain
Homeobox_KN
DUF7645
Motif
Other DBs
NCBI-GeneID:
108622604
NCBI-ProteinID:
XP_017876057
UniProt:
A0AAJ7N473
LinkDB
All DBs
Position
Unknown
AA seq
428 aa
AA seq
DB search
MPDSSNQLSSPGSECSSQMGGMHRNASAGQYEDSSMPGLALTHHSQTLTPASNGSLQYPQ
ELTTCTSANSSTSVGNVAAMSLGITVNNYTPDQISCMCKALLQRQDIEKLTRLLWSLPPG
ELLRRDENILIARATVAFHRGAYHELYSILESHPFSPDRHQKLQDMWFTSHYREAEKIRG
RPLGAVDKYRLRKKYPLPKTIWDGEEVVYCFKERSRNALKQCYMRTKYPLSEEKKNLAKE
TGLTLTQVANWFKNRRQRDRTPQTRTDMLPLNCQSSANNVIGGSVSNGDSLQLQSIDSNG
SNLAMSPLSTMSMSPVAVNPCSPMGMSSMPPRHPRYGTPVTPSHTTHPHNGGLSPMNDVK
ALCYGRSSYETAKDADQSTVYYPNHSSMHHQYYQQTHHQMMSTHHYQHHQQGMPSGYEIA
LPPPQHST
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgccggacagttcgaaccaactgtcgtcgccgggcagcgagtgcagcagtcaaatgggt
ggtatgcatcgaaacgcatccgctggacagtacgaggattcctcgatgccgggactcgca
ttgacgcatcattcgcaaactctgacgccggcgtcgaacgggagccttcagtaccctcag
gagttaaccacatgcacctcggcgaattcgtcgacgagcgtaggaaatgttgccgcaatg
tctttgggaatcacggtgaataattatacgccggatcagatatcttgcatgtgcaaggcg
ttattgcagagacaggatattgaaaagctaacgaggcttttgtggtcccttcctcccggc
gagttgctccgtcgcgacgagaacattttgatagcaagagccacggtcgcttttcatcgg
ggcgcctatcacgagctttactcgatcttagagagtcacccgttctcgccggaccgtcat
cagaagttgcaggatatgtggttcacatcgcactaccgcgaggcggagaagattcgcggc
aggccgctcggtgctgtagacaagtacaggctcaggaaaaagtatcctttgccgaagacc
atttgggacggcgaggaggtcgtttattgtttcaaggagcgatcgaggaacgcgttgaaa
cagtgttacatgaggaccaagtatccgctctccgaggaaaagaagaacctcgcgaaggag
accgggttaaccctgactcaggtggcgaattggttcaagaatcgacggcaaagggatcga
acgccgcaaacgagaacggatatgttgccgttaaattgccagagcagtgcgaacaatgtg
atcggcggctcggtgagcaacggggacagtcttcagctacaaagcatcgactcgaacggc
tcgaacttggcaatgtcaccgttgtcgacaatgagcatgtcaccggtcgctgtaaaccct
tgcagtccgatgggtatgagttctatgccaccccgtcatccaagatacggaacacccgtc
accccttcgcatacaacgcacccccataacggcggcctcagtcccatgaacgacgtcaaa
gcgttatgttacggacgtagtagttacgaaaccgctaaagacgcggaccaaagtacggtt
tattatccgaaccactcgagcatgcatcatcagtattaccaacagacgcatcatcagatg
atgtcgactcatcattatcagcatcatcaacagggcatgccgtcggggtacgaaatcgcg
ctaccgcctccgcaacactcaacgtga
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