Ceratina calcarata (carpenter bee): 108622684
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Entry
108622684 CDS
T06061
Name
(RefSeq) ABC transporter A family member 1-like
KO
K05643
ATP-binding cassette, subfamily A (ABC1), member 3
Organism
ccal
Ceratina calcarata (carpenter bee)
Pathway
ccal02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ccal00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
108622684
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ccal02000
]
108622684
Transporters [BR:
ccal02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
108622684
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
AAA_21
ABC2_membrane_3
DUF4162
SMC_N
AAA_23
R1_ABCA1
RsgA_GTPase
AAA_15
AAA_29
AAA_30
Motif
Other DBs
NCBI-GeneID:
108622684
NCBI-ProteinID:
XP_017876215
UniProt:
A0AAJ7ITJ7
LinkDB
All DBs
Position
Unknown
AA seq
1662 aa
AA seq
DB search
MGSKLRTFGLLLYKDVLVRKRHWKATIFLQCLIPLATFILIQSIRDLTVQPPLVINESTY
YPIETKESLPMLNNEFSFLYYVPRNSYIRNVTESIRMCLQLPYNNVVGFLNEDEMIDTYI
KIQAKFGMSQVVGLVFENYNASTTDIRYKIRHSFKIPPALFQNILDEYSFSSHYIYINAI
PFAQLQMCVDETLINRMTSRPIMDRQVSIQRMPYPPYVKVDTGDTILRTVFCMFSVIAFV
VPLALEINYSSKEKQIGVHALMAINGVSQYQNLLSWLITSVVFSNLYIIPILILFKNTFS
ENAVPYLYHSNTFIFWLILVVHIAHLTSFGMQAVAYISNSRYLAITLSIIYTISFSLHGT
FMKEQMFRVIPFLGLVFPDILLYRFLEELNAYETQLTGIQWSNMFYTGDAQYGSTGSVGF
ILIFSLLGAIIYFTLCVFINELIPGKYGVRKEPFFFKYLKKNKVSLDEDIEDMDFANVDS
ENFEPVTRGVLTPGIQIRNLKKTYRKFGLRKTTVQALRGISIDLYKGQITALLGHNGAGK
TTMMSILTGMVSLTEGKVLINGKNVMNDLQDIRNDLSLCPQENIVFPLLTVSEQLEFFAM
LKGTTKTRKEIRQNVNVLLEKLGLFGKRNVLPLKLSGGQQRRLCLGMALIGDVSTIILDE
PTSGMDPETRRDIWDLILKMRGQKTILISTHSMEEADILGDRIAIVDRGRLKCYGTPMFL
KKQYGYGHIEVTLSTKSWCNLEKILSKFDPRTQQISVDSDKIVLSVPNSENLPECLDKVE
KEKKTLGVTGIGVSLITLEEVFLKVINREEEKHLNELFCPPSQKVEGWDLTMQMILALYH
KKLVYAKKNLLTILQILLIPILSAILIGFSYSPATDSTNVFPYELDMYRNPRAVYSSENR
TIGTCYEKSVNYAGGIAEDARNMSVSDALLDRAREDIARYRNNYVASVEFNVSDTGTLLA
NALYSGTAIHSVPLTINLLSNALIKSVAGDEYSIRVSSQKLPNSLMETMLSMPGAESLTR
VLIFCCFFFPVVALFIIHPFEEKETKMKQLQRMTGVSSFVYWLTMFVFDLVILTLSILII
VTVFYLMDVILDVRLYYKTEIMIMILLLMLFGMNSLFVTYIFSFIPKSRNTVHITLSLLP
GGLVIVQYLLHEVIYGYNKLRVLHSIQKRLFRLIPYVSVFHGQYAFFEVALQNSRCRRLP
DKLLEAACLVYKDRCCDLNCTDGVCETYLPYFADFKSDMNLGECVVYLSITPLLYFAILI
MLEEQIPKKLYAKMFKQNLRDVADIKDDQVKKEKHVVASEIRKLENRVRNSVDEPRIGGP
ILEVNYSESPEKVNDNLFLVYELSKRYGSLVAVQEISFRVKQGECFGLLGVNGAGKSTTF
RMLTGEEIPNSGTMYLGRSEIQTDRETYLKQMGYCPQTNAMLNSLNSFDHLRLFAMLRGI
PRCKVDLEVNKWINRLSLTACMHQPSSTYSGGNKRRLNIAMALIGNPTLVLLDEPTSGVD
PAARRSLWSILKSCQATGQAIILTSHSMEECEALCNRLVIMVKGQLVCIGASQELKQRFG
AGYDIHIKLNPSRTDGDVDNIKRLMESKLSCEIRDENLSSIAFHVNDTGTTWEKMYSAMY
DLKRQYGCIEDFAVLSATLEQLFIQFARGTESTNPNAPTDSV
NT seq
4989 nt
NT seq
+upstream
nt +downstream
nt
atggggagtaaactgagaacctttggtttacttttatacaaagatgtattagtaagaaag
aggcattggaaggcaacaatatttctacaatgtttaatacccctcgccacgtttatatta
atacagtcgataagagacttgactgtgcaaccacctcttgtgatcaacgaaagtacatat
taccctatagaaaccaaagagtcgttaccaatgctgaacaacgagttctcgtttttatat
tatgtaccgaggaattcgtacatacgaaacgttacagagagcattcgaatgtgtctgcaa
ctgccatacaacaatgtagttggttttttgaacgaggacgagatgatcgatacttatata
aagatccaagcgaaatttggaatgtcacaggtggtgggacttgtattcgagaattacaat
gccagcaccactgacataagatacaaaattaggcactcattcaaaattccgcctgccctg
tttcaaaatatattagatgaatactcgttcagctcgcattatatatacataaacgctata
ccgttcgctcaattgcaaatgtgcgtagacgaaactcttataaatcgaatgacgtctcgt
cctataatggacaggcaggtgtccatacaaagaatgccctatcctccgtacgtcaaagtg
gacacaggcgatacgatattgagaacagttttctgtatgttctcagttattgctttcgta
gttccactcgccctagaaattaactattcgtcgaaggagaagcagatcggagtccacgct
ctaatggctataaacggagtatcgcaatatcagaacttactcagctggttgatcaccagt
gtcgtattcagcaatttatacattataccaatactaatattattcaagaatactttctcg
gagaacgctgtaccgtatttatatcacagcaacacgtttatattctggctaatacttgta
gtgcatattgctcatctaacgtcgttcggtatgcaagcagttgcatacatctcgaattca
cgttatctggcaataacgttgtcaattatttatactatttctttctcacttcacggaact
tttatgaaagagcaaatgtttagagtgataccgttcctgggactagtgttcccagatata
ctgctctacaggttcctcgaagaactgaacgcgtatgaaacgcaattaactggtattcaa
tggtctaatatgttttatactggagatgcacaatacggtagtaccgggagcgtaggattc
atactgatcttctcgctattgggggctatcatatatttcactctttgtgtatttattaat
gaattaattccgggaaaatacggagttcgcaaggagccgttctttttcaaatatttaaaa
aagaacaaagtgagcctcgacgaggatatagaggacatggatttcgctaacgttgatagt
gagaacttcgaacccgtcacgcgaggtgtactcactcctgggattcaaattcgtaatctc
aagaagacgtacaggaaatttggtttacgaaaaacgacagttcaagctctaagaggcatt
tcgatagatttatataaaggccagataacggctttactggggcacaacggggctggaaaa
actacgatgatgtctattttaacaggtatggtaagtctgacggaaggaaaagttctcata
aacgggaaaaatgtaatgaatgatttacaagatattcggaacgatctgagtttatgccct
caagagaatatcgttttcccccttttaaccgtatccgagcaactagagtttttcgctatg
ttaaaaggtacaactaaaacgcgaaaggagatccgacagaacgtcaacgtcttgctcgag
aaattaggtctgtttggtaagagaaacgttcttcccttgaagttatcgggaggacaacag
aggagattatgtctcggaatggctctgatcggcgatgttagtacgatcatcttagacgag
ccaacgtcgggaatggatcccgagaccaggagagatatatgggacctgatattgaaaatg
cgtggtcagaaaacgattttaatcagcacgcacagtatggaggaggccgacattctcgga
gatcggatcgctattgtggacagaggacgattgaaatgttatggtaccccgatgttccta
aagaagcaatacggctacggtcacatagaagtcaccctgtcaacgaaatcgtggtgtaac
ttggagaagatcctaagcaaattcgatcccagaacgcaacaaataagcgtggacagcgat
aagatagttctcagcgtaccgaactccgaaaatttgcccgaatgtctggacaaagtcgag
aaggagaagaagactctgggcgtaacggggattggcgtgtcgttgataactctggaagaa
gtatttctgaaagtgatcaaccgagaagaggaaaaacatctgaacgaattgttctgccct
ccgtcacagaaagtagagggctgggatttgactatgcaaatgattttggcactgtatcac
aagaaactggtttatgctaagaagaatttactcactattcttcaaatattgcttataccg
attttatccgctatattgatcgggttcagttatagcccggccaccgattcgacaaatgtg
tttccgtacgagcttgatatgtatagaaatccgagagccgtatattcgtctgagaataga
actatcggcacgtgttacgagaagtctgtgaattacgccggggggattgcagaagacgca
cgaaacatgagcgtctcggacgctttgttggatcgcgcgcgtgaagacattgcacgatac
cgcaacaattatgtcgcatctgtagaatttaatgtctccgataccggaaccttgcttgct
aatgctttgtattccgggacggcgatccacagcgtgcctttgactataaatttattgtcg
aacgcactgatcaaaagtgtagccggtgacgaatattccattcgagtttcaagtcagaaa
ttaccgaattcattgatggaaacgatgctgtcaatgccgggggccgaatcgttgacaaga
gtattaatattctgttgcttcttcttccccgttgttgctctcttcattatccaccctttc
gaagaaaaggaaacaaaaatgaaacagcttcaaaggatgaccggcgtatcctctttcgta
tactggctcactatgttcgtttttgatcttgtcattttaacgttatcaattcttataatc
gtgacagtgttttacttgatggacgttatattggatgtacgtttatactacaaaacagaa
ataatgataatgatattgctgttaatgctgttcggcatgaattcgttgttcgtaacatac
attttcagtttcattcctaagtcgaggaacaccgttcacattactctaagcttgctacca
ggcggattggtcatcgttcagtatcttttacacgaagtgatatacggttacaataaactg
agagtcctccactctattcagaaacgactgttccgtttaataccttacgtgagcgtgttc
cacggtcaatatgctttcttcgaggtagctctgcagaactcgaggtgccgtcgattgcct
gacaagcttctagaagcagcatgcttagtctacaaggatcgttgctgtgatttgaattgt
acggacggagtgtgtgaaacttatctaccttactttgctgatttcaagagcgacatgaac
ttgggagagtgcgtcgtctacttatcgatcacgccgctcttatatttcgctatattaatt
atgctagaggaacagatacctaagaaactatacgcgaagatgttcaagcaaaatctcagg
gatgtggctgatataaaagatgatcaggtgaagaaggagaagcatgttgtggcgtcagag
attagaaaattggagaatcgtgtgaggaatagtgtcgacgaaccaaggattggaggtcct
atcctcgaagtcaactactcagaaagtccagagaaagtcaacgacaatctatttctggtt
tacgaattgagtaaacgttacggtagcttggtggcagtgcaggaaatcagttttcgagta
aagcaaggggagtgctttggattgctcggcgttaacggcgctgggaagagtaccacgttc
agaatgttgaccggcgaggaaataccaaacagtggtaccatgtacttaggaagatccgag
attcaaactgatagagaaacttatttaaagcaaatgggatattgtccgcaaactaatgca
atgctgaattcgttgaattcgttcgatcacttgcgactgtttgccatgcttcgcggtatt
cccagatgcaaagtggatctcgaagtcaacaaatggatcaatcgactgagtttgaccgca
tgtatgcatcaaccgagctctacttatagcggaggtaacaaacgacgtttgaacatcgca
atggcacttatcgggaatccaacgctcgttcttctggacgagccaacatcgggtgtcgat
cccgcggcaaggagatcgctctggagtatacttaagtcgtgtcaagcaacgggacaagct
atcatacttacttctcacagcatggaagaatgcgaagctctgtgcaatagactagtcatt
atggtgaaaggacaattggtttgtatcggtgctagccaggaattgaagcaacgattcggt
gctggttacgatattcatattaaactgaaccccagtcgcacggatggcgatgtggacaat
ataaaaagacttatggaatctaagttatcctgcgagattcgtgatgaaaatttgagttcc
atcgcatttcacgtgaacgataccgggactacgtgggagaagatgtacagtgcgatgtac
gatttaaaaagacaatacggctgtatcgaagatttcgccgttctctccgccacgctggag
cagctattcattcagttcgccagaggaaccgaatcaacgaatccaaacgcgcctacagac
tctgtctaa
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