Ceratina calcarata (carpenter bee): 108622742
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Entry
108622742 CDS
T06061
Name
(RefSeq) transcription factor Sox-19b-like
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
ccal
Ceratina calcarata (carpenter bee)
Brite
KEGG Orthology (KO) [BR:
ccal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccal03000
]
108622742
Transcription factors [BR:
ccal03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
108622742
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
SOXp
Motif
Other DBs
NCBI-GeneID:
108622742
NCBI-ProteinID:
XP_017876310
UniProt:
A0AAJ7ISR7
LinkDB
All DBs
Position
Unknown
AA seq
390 aa
AA seq
DB search
MRAGGNMCDGSFTETLRGMQGMSGTSPPGGGGVGPMGVGLGSPLGPSPKKAQVEHIKRPM
NAFMVWSRLQRRKIAQENPKMHNSEISKRLGAEWKLLTEDEKRPFIDQAKRLRAQHMKEY
PDYKYRPRRKPKTLRKEGYPYSIPYPSVPMDALRAGMAGSMGQAGMGSYYGPAAAYGSLS
AASMAAAAAAAAQQSAAAMSAGLAAPAQVVSSMDAMKYSMEADKYRAAYMPPSTLAMSMY
SDPKYLDSSPKSYLDRSYLDSAKAYFEQSKLYMDQKPAISDYNRPSYEHNKLYDESSPGS
VVGGSGPTRSPAADSPDMSKQHERTEQGSSSASSTSTSSAASPGASLPTYYPGPVQTSGL
LGPQMSQYSGYQTTPTPGNESFRRPLTVIF
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atgagagccggcggcaacatgtgcgacggatcgttcacggagaccctgcgcggtatgcag
ggcatgtcgggtacgtcaccacccggtggcgggggtgtcggccccatgggggttggtttg
ggtagccctcttggcccatccccgaagaaagcgcaagtggaacacatcaaaaggccgatg
aatgcgttcatggtttggtcccggctgcagcgcaggaaaatcgcacaggagaatccgaaa
atgcacaactcggagatttctaaaaggcttggtgccgaatggaaactccttacggaagac
gagaaacgaccgttcatcgaccaggcaaagagattgcgggcacaacacatgaaggaatac
ccggattacaaatacagacctagaagaaagcctaaaaccttgcgtaaggaaggttaccca
tacagcattccataccccagcgtgccaatggatgcactgcgagctggaatggccggtagt
atgggacaggccggaatgggctcgtattatggtcccgcggcggcgtacgggtccctatcg
gcggcaagcatggcagcggctgcggctgcggctgcacaacagtctgcggctgccatgtcc
gcgggtctcgcggcacctgctcaggtggtcagctcgatggacgcgatgaagtactcgatg
gaggctgataaatatcgcgccgcgtacatgccgccgagcacactggcgatgagcatgtac
tcggacccgaagtacctggactcgagcccgaagtcgtacctggaccgaagctacctagac
tcggcgaaggcttatttcgagcagtcgaagctttatatggaccagaagccggcgatcagc
gattataatcggcccagttacgagcacaataagctttacgacgagtcgagccccggtagc
gtggtgggtggcagtggtccgacgaggtcgccggccgcggattcgccagacatgagcaaa
cagcacgagagaaccgagcagggatcgtcgagcgcgagttctacgtccacgtcgtcggcg
gcaagccccggcgcgagtttgccgacctattacccgggcccggtgcaaaccagtggcctg
ctcggcccgcaaatgagtcagtatagtgggtaccaaacgacaccgacgcccggtaatgaa
tcgttccgacgaccgctcactgtcatcttctga
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integrated database retrieval system
