Ceratina calcarata (carpenter bee): 108623039
Help
Entry
108623039 CDS
T06061
Name
(RefSeq) protein NRDE2 homolog
KO
K26109
nuclear exosome regulator NRDE2
Organism
ccal
Ceratina calcarata (carpenter bee)
Brite
KEGG Orthology (KO) [BR:
ccal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccal03019
]
108623039
Messenger RNA biogenesis [BR:
ccal03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
108623039
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NRDE-2
ARM_TT21
DUF2165
Motif
Other DBs
NCBI-GeneID:
108623039
NCBI-ProteinID:
XP_026667820
UniProt:
A0AAJ7W972
LinkDB
All DBs
Position
Unknown
AA seq
978 aa
AA seq
DB search
MSLFPAYSANTNKSNEPKDLSKENDTTNWLYNSSCSKQITSDNFIRLSSESSDEIINEIP
YLPKEEPSHAATSLDKGKPVLEEKVKSRHIKKKRKDKRKDVHGKLEKSGYRKNVENVYFE
DKYRERGYNTVKTLNSRLRPYYDVKKSTLGFIPYKQSKKINYKRYYVKNIDHVEKKKKDP
VISRESTTNLSKEEEYTPLWHIKLEELQKAKTKEYNEKLTDNPNDVTLWLEFIEFQDTLG
YFQQYQTAKDIHRATTLRKLSIVEKALEKNADSTILLKVKLSLMGELSPADELSKQLETL
VNKNSGSIILWQEFIMTVQTSVAMCTVPKVLDLYSKCFCILKQKARTNPRVYDGCLLQML
YWCLTFLRHTGLWEQMWETMRLNVILNLSLNKDSLTFRKTIDEKKLIGMEEVILMSRLPL
NQLWQRTESLRENCHWISVNRSELELVGDSRRFVLPDDVADFVHPILSRNLNFRMAIHVL
LLLKVPLLPTRDYMLRTLKLEEFEWGVETSEVLLPFAYPMIGEMTGRSERQELLSGLLEG
RLTSGPQYLMFHPAQESYLDFIREIFFTIAENLSPLQRTSIFVWWLRFERLLIFLQKHDP
LNMNDTKLKKLKTTLKVFLKKDENRNNLHFYREYALIEKEMGKFDNCVNILQTAIQSQGA
CPSAIHNPDERSALVSLYRTLAETLLNVETYEETNKTKILDVMKQMVPEAEADPLSQVEK
YLEKCVQSFLEVACPENEEDAYFLPNLHCDTIVCYAYLLYVRDSDFDRAISIFKNCVDHY
KDCQYIQEILQESQLALTQLHFKLIRNESLLKTGLDDMLNLYPNNFYALSVLACIESKLP
IWKSNSQVAKLQLWKAFALCLAYRKRIRYLQKLEDYVSMNAAINKLMHLHQTLARIPKIK
NCPLLWRLYMLLLREYNLCEKKGEEIYHESVVLCPWARSIYIDAAEVAPQVLTQVQDVIR
EKELRMHVTPEELDILRG
NT seq
2937 nt
NT seq
+upstream
nt +downstream
nt
atgtctttgtttccagcttattctgcaaacacaaataaatccaacgaaccaaaagatctg
tcaaaagaaaatgacacaaccaattggttatacaattctagttgctcaaaacaaattaca
tctgataatttcattcgtttatcctctgaatcatcagatgaaattataaatgaaattcct
tatttacctaaagaagaaccttcgcatgctgctacttctttggataaaggaaagcctgta
ttagaggaaaaagtaaaatccagacatattaaaaagaaacgaaaagataaaagaaaagat
gtacatggaaaactagagaagtcaggatacagaaagaatgtagaaaatgtatactttgag
gacaaatatagagagagaggatataatactgtaaagacacttaattctaggcttaggcca
tattatgatgttaagaaaagtacccttggtttcataccttacaagcaatcgaaaaaaatt
aactacaaacgatattacgtaaagaatattgaccatgtagaaaagaaaaagaaagatccc
gttataagcagagaatctaccaccaatttatctaaagaggaagaatatactcctctatgg
catatcaaattggaggaattacagaaagctaagaccaaagagtataatgaaaaattaaca
gataatccaaatgacgttacattgtggcttgagttcatagaatttcaagacactttagga
tatttccagcagtatcaaacagcaaaggatattcatagagctacgacattaagaaagtta
tctatagttgaaaaagccctggaaaagaacgcagattcaacgatcttattaaaagtcaag
ttgtctctcatgggggaactttcacctgcagatgaactttcgaaacagcttgaaacatta
gttaacaaaaattcaggcagcattattttatggcaagaatttatcatgaccgtacaaact
tctgtagcaatgtgcacagtaccgaaagtgttagatctgtattcaaaatgcttctgcatt
ctgaaacagaaagctagaaccaatccccgcgtctacgatggatgtctattgcaaatgttg
tactggtgtctaacatttttaagacatactgggctttgggaacaaatgtgggaaacaatg
cgcctgaacgtcattctaaatcttagtttgaacaaggacagtctgacctttcgaaaaaca
atagatgaaaagaaattaattggaatggaagaagtaatactgatgtctagattaccactt
aatcagttgtggcaaagaacagaatcattgagagagaactgtcattggatcagcgttaat
agaagcgaattagaattagttggtgattcccggagattcgttctaccggatgatgtcgca
gatttcgttcatcctatactttcaagaaatttgaatttccggatggcgattcatgtgtta
cttttactcaaagtaccattgttacctactcgggattacatgttaaggacgttgaagcta
gaggaatttgaatggggtgtagaaacctcagaggtattacttccctttgcctatcccatg
ataggtgagatgaccggacgtagcgaaagacaagaattattgagcggtctactggaagga
cgtttaacatcgggtcctcaataccttatgtttcatccagctcaagaatcatatttggat
tttatacgtgaaatattctttacaatcgccgagaatttgtcacctctccaacgtacgagt
atattcgtctggtggttacggttcgagagactgcttatctttttgcaaaaacacgatcca
ttaaatatgaacgatactaaattgaaaaagctgaagacaacgctaaaagtattcttaaaa
aaagacgagaataggaataacttacatttctatagagaatatgcgttgatagaaaaagaa
atggggaagtttgataattgtgtgaatattttacagactgctattcagtctcagggtgca
tgtccttccgcgattcataatcctgacgaaaggtcagctcttgtaagtttatatcgaaca
ttggcagaaactttactcaacgttgaaacttacgaagaaacgaacaaaacgaaaatatta
gatgttatgaaacaaatggtgcccgaagcagaggcagatccattatcacaagtggaaaaa
tatttagagaaatgtgtgcaaagttttttggaagtagcttgtccagagaatgaagaagat
gcatatttcttaccaaatctccactgcgatacaattgtttgttatgcatacttattatat
gtacgagattccgatttcgatagagcgatcagtatctttaaaaactgtgtagatcattat
aaggattgtcaatatatacaggaaatattgcaagaaagtcaactagcgcttacacaatta
cacttcaaactaatccgaaacgaaagccttttaaaaacggggttggatgacatgttaaat
ttatatccaaacaatttttacgcactttcagtattggcttgtatagagagtaagttgcct
atttggaaaagtaacagtcaagtggccaaacttcaattatggaaagcttttgctttgtgt
ttggcatatagaaaacgtattcgctacttacaaaagctcgaggattatgttagtatgaac
gctgcaattaataaattgatgcacttgcaccagacacttgcaaggataccaaagatcaaa
aactgtcctttgttatggagattgtatatgctccttctaagagagtataatttatgtgaa
aagaaaggagaagaaatatatcacgaaagtgttgtattatgcccttgggccaggagtata
tacatcgatgcagctgaggttgcaccacaagttctcacgcaagtccaagatgtgataaga
gagaaggaactcagaatgcatgttacaccagaggaattagacattttacgtggttaa
DBGET
integrated database retrieval system