KEGG   Ceratina calcarata (carpenter bee): 108623039
Entry
108623039         CDS       T06061                                 
Name
(RefSeq) protein NRDE2 homolog
  KO
K26109  nuclear exosome regulator NRDE2
Organism
ccal  Ceratina calcarata (carpenter bee)
Brite
KEGG Orthology (KO) [BR:ccal00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ccal03019]
    108623039
Messenger RNA biogenesis [BR:ccal03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Other 3'-5' decay factors
     108623039
SSDB
Motif
Pfam: NRDE-2 ARM_TT21 DUF2165
Other DBs
NCBI-GeneID: 108623039
NCBI-ProteinID: XP_026667820
UniProt: A0AAJ7W972
LinkDB
Position
Unknown
AA seq 978 aa
MSLFPAYSANTNKSNEPKDLSKENDTTNWLYNSSCSKQITSDNFIRLSSESSDEIINEIP
YLPKEEPSHAATSLDKGKPVLEEKVKSRHIKKKRKDKRKDVHGKLEKSGYRKNVENVYFE
DKYRERGYNTVKTLNSRLRPYYDVKKSTLGFIPYKQSKKINYKRYYVKNIDHVEKKKKDP
VISRESTTNLSKEEEYTPLWHIKLEELQKAKTKEYNEKLTDNPNDVTLWLEFIEFQDTLG
YFQQYQTAKDIHRATTLRKLSIVEKALEKNADSTILLKVKLSLMGELSPADELSKQLETL
VNKNSGSIILWQEFIMTVQTSVAMCTVPKVLDLYSKCFCILKQKARTNPRVYDGCLLQML
YWCLTFLRHTGLWEQMWETMRLNVILNLSLNKDSLTFRKTIDEKKLIGMEEVILMSRLPL
NQLWQRTESLRENCHWISVNRSELELVGDSRRFVLPDDVADFVHPILSRNLNFRMAIHVL
LLLKVPLLPTRDYMLRTLKLEEFEWGVETSEVLLPFAYPMIGEMTGRSERQELLSGLLEG
RLTSGPQYLMFHPAQESYLDFIREIFFTIAENLSPLQRTSIFVWWLRFERLLIFLQKHDP
LNMNDTKLKKLKTTLKVFLKKDENRNNLHFYREYALIEKEMGKFDNCVNILQTAIQSQGA
CPSAIHNPDERSALVSLYRTLAETLLNVETYEETNKTKILDVMKQMVPEAEADPLSQVEK
YLEKCVQSFLEVACPENEEDAYFLPNLHCDTIVCYAYLLYVRDSDFDRAISIFKNCVDHY
KDCQYIQEILQESQLALTQLHFKLIRNESLLKTGLDDMLNLYPNNFYALSVLACIESKLP
IWKSNSQVAKLQLWKAFALCLAYRKRIRYLQKLEDYVSMNAAINKLMHLHQTLARIPKIK
NCPLLWRLYMLLLREYNLCEKKGEEIYHESVVLCPWARSIYIDAAEVAPQVLTQVQDVIR
EKELRMHVTPEELDILRG
NT seq 2937 nt   +upstreamnt  +downstreamnt
atgtctttgtttccagcttattctgcaaacacaaataaatccaacgaaccaaaagatctg
tcaaaagaaaatgacacaaccaattggttatacaattctagttgctcaaaacaaattaca
tctgataatttcattcgtttatcctctgaatcatcagatgaaattataaatgaaattcct
tatttacctaaagaagaaccttcgcatgctgctacttctttggataaaggaaagcctgta
ttagaggaaaaagtaaaatccagacatattaaaaagaaacgaaaagataaaagaaaagat
gtacatggaaaactagagaagtcaggatacagaaagaatgtagaaaatgtatactttgag
gacaaatatagagagagaggatataatactgtaaagacacttaattctaggcttaggcca
tattatgatgttaagaaaagtacccttggtttcataccttacaagcaatcgaaaaaaatt
aactacaaacgatattacgtaaagaatattgaccatgtagaaaagaaaaagaaagatccc
gttataagcagagaatctaccaccaatttatctaaagaggaagaatatactcctctatgg
catatcaaattggaggaattacagaaagctaagaccaaagagtataatgaaaaattaaca
gataatccaaatgacgttacattgtggcttgagttcatagaatttcaagacactttagga
tatttccagcagtatcaaacagcaaaggatattcatagagctacgacattaagaaagtta
tctatagttgaaaaagccctggaaaagaacgcagattcaacgatcttattaaaagtcaag
ttgtctctcatgggggaactttcacctgcagatgaactttcgaaacagcttgaaacatta
gttaacaaaaattcaggcagcattattttatggcaagaatttatcatgaccgtacaaact
tctgtagcaatgtgcacagtaccgaaagtgttagatctgtattcaaaatgcttctgcatt
ctgaaacagaaagctagaaccaatccccgcgtctacgatggatgtctattgcaaatgttg
tactggtgtctaacatttttaagacatactgggctttgggaacaaatgtgggaaacaatg
cgcctgaacgtcattctaaatcttagtttgaacaaggacagtctgacctttcgaaaaaca
atagatgaaaagaaattaattggaatggaagaagtaatactgatgtctagattaccactt
aatcagttgtggcaaagaacagaatcattgagagagaactgtcattggatcagcgttaat
agaagcgaattagaattagttggtgattcccggagattcgttctaccggatgatgtcgca
gatttcgttcatcctatactttcaagaaatttgaatttccggatggcgattcatgtgtta
cttttactcaaagtaccattgttacctactcgggattacatgttaaggacgttgaagcta
gaggaatttgaatggggtgtagaaacctcagaggtattacttccctttgcctatcccatg
ataggtgagatgaccggacgtagcgaaagacaagaattattgagcggtctactggaagga
cgtttaacatcgggtcctcaataccttatgtttcatccagctcaagaatcatatttggat
tttatacgtgaaatattctttacaatcgccgagaatttgtcacctctccaacgtacgagt
atattcgtctggtggttacggttcgagagactgcttatctttttgcaaaaacacgatcca
ttaaatatgaacgatactaaattgaaaaagctgaagacaacgctaaaagtattcttaaaa
aaagacgagaataggaataacttacatttctatagagaatatgcgttgatagaaaaagaa
atggggaagtttgataattgtgtgaatattttacagactgctattcagtctcagggtgca
tgtccttccgcgattcataatcctgacgaaaggtcagctcttgtaagtttatatcgaaca
ttggcagaaactttactcaacgttgaaacttacgaagaaacgaacaaaacgaaaatatta
gatgttatgaaacaaatggtgcccgaagcagaggcagatccattatcacaagtggaaaaa
tatttagagaaatgtgtgcaaagttttttggaagtagcttgtccagagaatgaagaagat
gcatatttcttaccaaatctccactgcgatacaattgtttgttatgcatacttattatat
gtacgagattccgatttcgatagagcgatcagtatctttaaaaactgtgtagatcattat
aaggattgtcaatatatacaggaaatattgcaagaaagtcaactagcgcttacacaatta
cacttcaaactaatccgaaacgaaagccttttaaaaacggggttggatgacatgttaaat
ttatatccaaacaatttttacgcactttcagtattggcttgtatagagagtaagttgcct
atttggaaaagtaacagtcaagtggccaaacttcaattatggaaagcttttgctttgtgt
ttggcatatagaaaacgtattcgctacttacaaaagctcgaggattatgttagtatgaac
gctgcaattaataaattgatgcacttgcaccagacacttgcaaggataccaaagatcaaa
aactgtcctttgttatggagattgtatatgctccttctaagagagtataatttatgtgaa
aagaaaggagaagaaatatatcacgaaagtgttgtattatgcccttgggccaggagtata
tacatcgatgcagctgaggttgcaccacaagttctcacgcaagtccaagatgtgataaga
gagaaggaactcagaatgcatgttacaccagaggaattagacattttacgtggttaa

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