Ceratina calcarata (carpenter bee): 108623111
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Entry
108623111 CDS
T06061
Name
(RefSeq) RNA polymerase-associated protein CTR9 homolog
KO
K15176
RNA polymerase-associated protein CTR9
Organism
ccal
Ceratina calcarata (carpenter bee)
Brite
KEGG Orthology (KO) [BR:
ccal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccal03021
]
108623111
Transcription machinery [BR:
ccal03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
108623111
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_14
TPR_19
TPR_12
TPR_8
TPR_CcmH_CycH
TPR_17
TPR_16
TPR_11
TPR_10
TPR_7
TPR_Slam
TPR_9
TPR_MalT
ARM_TT21_4th
PknG_TPR
TPR_21
ANAPC3
Peptidase_S41_N
Motif
Other DBs
NCBI-GeneID:
108623111
NCBI-ProteinID:
XP_017876906
UniProt:
A0AAJ7ITM0
LinkDB
All DBs
Position
Unknown
AA seq
1298 aa
AA seq
DB search
MAGSIEIPLRDTDEVIDLDLDQLPDGDEVLSILRQEHAQLNIWVNLALEFYKQHKIEDFI
KILESSRIDANIDYRDYEKDQMRALDMLAAYYVQEANREKNKDKKRDLFTKATLLYTTAD
KIIMYDQNHLLGRAYFCLLEGDKMDQADAQFNFVLNQSPNNIPSLLGKACIAFNKKDYRG
ALAFYKKALRTNPNCPAAVRLGMGHCFMKLNNQEKARLAFERALQLDGQCVGALVGLSVL
KLNQQQPDSIRTGVQMLSKAYTIDSTNPMVLNHLANHFFFKKDYNKVQHLALHAFHNTEN
EAMRAESCYQLARAFHVQGDYDQAFQYYYQATQFAPPVFVLPHFGLGQMYVYRGDAENAA
QCFEKVLKAQPGNYETMKILGSLYANSTSQSKRDIAKNHLWKVTEQFPDDVEAWIELAQI
LEQSDLNAALNAYGTATRILKEKVQADIPPEILNNVGALHYRLGNLEEARKNLEESLARS
KADALHDAVYYNSIAVTTTYNLARLNEALCIFDKAEKLYKDILKEHPNYVDCYLRLGCMA
RDKGQIYEASDWFKDALRINIEHPDAWSLLGNLHLAKMQWGPGQKKFERILKNPTTSTDA
YSLIALGNIWLQTLHQSGKDKDREKRHQDRALTMYKQVLRNDPKNIWAANGIGAVLAHKG
CINEARDIFAQVREATADFCDVWLNIAHIYVEQKQYVSAIQMYENCLRKFYKYHHVEVLQ
YIGRAYFKAGKLKEAKLTLLKARRVAPQDTVLLYNIALVLQRLATQILKDEKSTLTTVLQ
AVHELGLSHKYFQYLSAHGDRMEQLAETEARRCQDLLSQAQYHVARARRLDEEEKMLRKK
QEEERQAFKMRQTEEQRKLEELRRQKEEEMLQKRQEYVEKTKNALVFGEMPSEKTGRKGK
RPRTDQYISDSGGSGREEGREEPPREKKRKRKASGERKEKKGRSKGKRRKDGGSGESGSD
SDRPKRKRGRKIKTGRKEKASRKSTSETSKGKMPLSKETISTSESDSDSGGLKIASGGES
GNEGRGRGSRRIMSDSEGSRGSRSRSRSRSKSRSRSRSTSRSRSRSRSRSRSQSRSSRSR
SRSGSKSRSVSRSKSRSRSRSASAKSESRSRSVSRSRSGSRKSQSRSPSGSRKSGSQPRS
RSGSRKSHSPSRSRSGSRQSEVQTRSRSGSRNQSRSRSRSGSRKSGSQPRSRSGSPASAG
SRSRSPSGSRKAASRSRSRSGSRSGSQSDERKSRSKSRSKSKSVSRSRSGSRSKSGSRSR
SPSESARSATPESRKSVSGSEVGSRHSSTDRGGGSDSE
NT seq
3897 nt
NT seq
+upstream
nt +downstream
nt
atggcgggctccatagagatcccacttcgtgacacagacgaggtaatcgaccttgacctc
gatcaattaccagacggtgatgaagttcttagcattttacggcaagaacatgcacaactt
aatatttgggtcaatttggctcttgaattctataagcaacacaaaattgaagacttcatt
aagatacttgaatcttctcggattgatgctaatattgattaccgcgactatgagaaagat
cagatgcgtgcgctcgatatgttggctgcatattatgtgcaggaagccaatagggagaag
aataaagacaagaaaagagatctgtttactaaagcaactctgctgtatacaacagcagac
aagatcatcatgtacgaccagaatcatctacttgggagagcgtatttctgtctcttggaa
ggggacaaaatggaccaggctgacgcccaatttaattttgtactaaatcaatctccgaat
aatataccctccctcctcggcaaagcatgtatagcattcaacaagaaagactatagagga
gcacttgctttttataagaaagcattgagaacaaatccaaactgtccagctgccgtaaga
ctaggaatgggacactgtttcatgaaactgaacaatcaggagaaggcgcgtttagcattt
gaaagagctttgcaactagacggccaatgcgttggtgcattggttggtctttcagtgttg
aaactcaaccaacaacagcctgatagtatcagaactggagtacaaatgttgtccaaagcg
tacacaatcgattcgacgaatcctatggtgttgaaccacttggcaaatcatttctttttt
aagaaggattacaacaaagtgcaacacctggcgcttcacgcgtttcataatactgagaac
gaggctatgcgcgccgagagctgctatcaattagcaagagcatttcatgttcaaggggat
tacgatcaagcctttcaatattattatcaggcgactcaattcgcaccaccagttttcgta
ttgcctcactttggcttgggtcagatgtacgtttatcgcggtgacgcagaaaacgcggcg
cagtgtttcgagaaagtcttgaaggctcagccgggaaattatgaaacgatgaagattctt
ggttcgctgtacgcgaattcgacttcgcaatcgaaacgagatatcgctaagaaccacctt
tggaaagtgaccgaacaattcccagacgacgtcgaggcgtggatcgagctggctcaaata
ttggaacaaagtgaccttaacgcagctttaaacgcttacggtactgcaactaggattttg
aaggagaaagttcaggctgatattccgccagagattttaaataacgttggagctctacat
tatagacttggaaatttagaggaagctagaaaaaatttggaagaatctctggcacgttct
aaagccgatgccttacacgatgctgtatactacaactcgatcgctgttacgactacgtat
aacttggcccgtttgaacgaagctttgtgtatatttgataaggcggagaagttatacaaa
gatattttaaaggaacatccgaactacgtagattgttatctacgacttggatgtatggct
cgtgataaaggacaaatttacgaagcatcggattggttcaaggatgctttgagaataaac
attgaacatccggacgcgtggtcccttttgggtaatctgcatttagccaaaatgcaatgg
ggaccaggtcaaaagaaattcgaaaggattctgaagaacccaacgacaagcaccgatgcc
tattcgttgatcgccctaggcaacatttggttgcagacgttgcaccaaagtggaaaggat
aaggatagagagaagcgacatcaagacagagcattgaccatgtataaacaagttttacgg
aacgatccgaagaatatttgggcggcgaacgggatcggagctgtgttagctcacaagggc
tgtataaacgaagcgagggatattttcgctcaggttcgagaggcaactgccgatttttgt
gacgtctggctaaacattgctcacatttacgtcgagcagaaacaatacgtcagtgccatt
cagatgtacgagaactgtcttcggaaattttataaataccatcacgtcgaagtgttgcaa
tacattgggagagcttatttcaaagctggcaaattgaaagaagcaaagttgacgttgtta
aaggcgaggagggtagccccgcaggatactgttttgttgtacaatatcgcgcttgtgctc
caacgtttggcaacgcaaatcttgaaagatgaaaaatcgactttgactacggtattgcaa
gcagttcacgaattgggactttcgcacaaatacttccaatacttgtcggcgcacggagat
agaatggaacaacttgcggaaaccgaggcaagacgatgccaagatttgttatcgcaggcg
cagtatcacgtcgccagagctaggagattagatgaagaggaaaaaatgctcaggaagaag
caagaagaagagaggcaagcgtttaaaatgcgacagacggaagagcaacgaaaactcgaa
gaactgcggcgtcagaaagaggaagagatgttgcagaaacgacaggaatatgttgagaag
acgaagaatgctttggtgttcggtgaaatgccttctgagaaaactggacggaaaggaaag
aggccacgcactgatcagtacattagtgacagcggtggttctggcagagaagaaggtaga
gaagaaccaccgagagaaaagaaacgcaagaggaaagcgagtggtgaacgaaaagagaag
aaaggcagaagtaaagggaaacgcaggaaggacggtggaagtggagaaagtggttcagac
agcgaccgacccaaacggaagcgtggaaggaagattaaaactggtagaaaagagaaagca
tcgagaaaaagtacaagtgagacttcaaaaggcaagatgcccttatcgaaagaaacaata
tcgacgagtgaatctgatagtgattcaggaggcctcaagatcgccagcggtggtgaaagc
ggtaacgagggtcgtggacgcggaagcagacgaattatgtcagactctgaaggatcccga
ggatcacggtctagatctcgttctaggtcgaaatccagaagtcgttcaagaagtacctct
cgttcgcgttcacgttcgcgttcacgctcgcgttcccagtcacgatcctctcgctcgcgg
tctcgttctggttcaaaatcaaggagtgtatcgcgatcaaaaagcaggtcgagatcgaga
tctgcttcagcgaaaagtgaatcgcgatcgagatcggtctctaggtcaagatcaggatca
agaaagagtcaatcacgctcgcctagcggatctagaaaaagtggatcccaaccgagatcg
agatcgggatcgagaaagagtcattcgccatcacgatcccgtagtggatcaagacaaagc
gaggtgcaaacaaggtctagatcaggctctagaaatcagtcgcgatcgaggtcgcgcagt
ggatcaaggaaaagtggatcgcagccaagatcgagatcaggatctccggctagcgcagga
tcaagatctagatctcccagcggctctaggaaggcagcgtcaagatcaagatcaaggtcg
ggatcgagaagcggctcgcagtcggacgagcgtaaatcaagaagcaagagtcgttcgaaa
tctaagtctgtctcaagatcacgttcgggatcaagatcaaaaagcggctctcgaagtcgg
agtcctagtgaatcggcgcgatcggccactccagaatccagaaaatcagtctcaggtagc
gaggtcggatcccggcattcgagcacggaccggggtggtggaagcgacagcgaatag
DBGET
integrated database retrieval system
