Ceratina calcarata (carpenter bee): 108623241
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Entry
108623241 CDS
T06061
Name
(RefSeq) putative ATP-dependent RNA helicase me31b
KO
K12614
ATP-dependent RNA helicase DDX6/DHH1 [EC:
5.6.2.7
]
Organism
ccal
Ceratina calcarata (carpenter bee)
Pathway
ccal03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ccal00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
108623241
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccal03019
]
108623241
03036 Chromosome and associated proteins [BR:
ccal03036
]
108623241
Enzymes [BR:
ccal01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
108623241
Messenger RNA biogenesis [BR:
ccal03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
108623241
mRNA degradation factors
5'-3' decay
Decapping complex
108623241
Chromosome and associated proteins [BR:
ccal03036
]
Eukaryotic type
Gene silencing
piRNA pathway
108623241
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
AAA
Motif
Other DBs
NCBI-GeneID:
108623241
NCBI-ProteinID:
XP_017877105
UniProt:
A0AAJ7IU34
LinkDB
All DBs
Position
Unknown
AA seq
443 aa
AA seq
DB search
MMTEHINSNHVLNSGLNSKSDIDKMDDVGWKAKLKIPPKDKRVKTSDVTDTRGNEFEEFC
LKRELLMGIFEKGWEKPSPIQEASIPIALSGKDILARAKNGTGKTGAYSIPVLEQVDPRK
DVIQALVIVPTRELALQTSQICIELAKHMDIKVMVTTGGTDLRDDIMRIYQKVQVIIATP
GRILDLMDKNVAQMDHCKILVLDEADKLLSQDFKGMLDHVISRLPHSRQILLYSATFPLT
VKQFMEKHLRDPYEINLMEELTLKGVTQYYAFVQERQKVHCLNTLFSKLQITQSIIFCNS
TQRVELLAKKITDLGYCCYYIHAKMAQAHRNRVFHDFRAGLCRNLVSSDLFTRGIDVQAV
NVVINFDFPKMAETYLHRIGRSGRFGHLGIAINLITYEDRFNLHRIEQELGTEIKPIPKV
IDPSLYVARPEDNNSMEEGNVSK
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgatgacagaacacataaactccaaccatgtcctgaactctggtttgaattccaaatca
gatatagacaaaatggatgatgttggttggaaagcgaaattaaaaattccaccaaaggac
aaacgtgtgaaaactagtgatgtcactgatacgcgtggcaacgagttcgaggagttttgc
ttgaagcgcgaattgttgatgggcatctttgagaagggctgggagaagccatccccgatc
caagaggccagcattcccattgcactgtctggtaaagatatcctggcccgcgcaaagaat
ggcaccgggaaaactggggcctactcaatcccagtgctagaacaagtcgatccacgaaaa
gatgtgatccaggcactggtcattgtacccaccagagagttggctctccagacatcgcag
atttgcatcgaactggcaaaacacatggacattaaagtaatggtgactaccggagggacc
gacttgcgggatgatattatgaggatttaccagaaagtgcaagtaataatagcaacgcca
ggaaggattcttgatctcatggacaagaatgttgctcagatggatcattgtaaaattcta
gttttggatgaagcggacaaactcttgtcgcaagattttaaaggaatgttggatcacgtc
atttcgagattaccgcactcacgtcagatattgctttactcggcaacgttcccgctgaca
gtgaagcagttcatggagaaacacttgagagatccatacgagattaatttaatggaggag
cttacgttgaaaggcgtgacgcaatactacgccttcgtacaggaacgacagaaagtccat
tgtctcaacacactgttctccaagttgcaaataacacaaagtataatattctgcaattcg
acacaacgtgtcgaattactcgcgaaaaagataacagacctaggttactgctgttattac
atacacgcgaaaatggcgcaggcacaccgaaatcgcgtgttccacgatttccgagcagga
ctttgcagaaacttggtgagcagtgacctgttcacgcgcggtatcgacgtccaggccgtg
aacgtcgtgatcaacttcgactttccaaaaatggctgaaacctacctgcaccgcatcgga
cggtcgggacggttcggtcacctaggcatagcgatcaacctaatcacgtacgaggaccgt
ttcaacctgcaccgcatcgagcaggagcttggcacggagatcaaacccatcccaaaggta
atagatccaagtttgtacgtagcgcggcccgaagacaataacagtatggaagagggcaac
gtgtccaagtag
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