Ceratina calcarata (carpenter bee): 108623248
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Entry
108623248 CDS
T06061
Name
(RefSeq) structure-specific endonuclease subunit slx1
KO
K15078
structure-specific endonuclease subunit SLX1 [EC:3.6.1.-]
Organism
ccal
Ceratina calcarata (carpenter bee)
Pathway
ccal03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ccal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
108623248
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccal03400
]
108623248
DNA repair and recombination proteins [BR:
ccal03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
108623248
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SLX1_C
GIY-YIG
T5orf172
zf-RING-like
U-box_ZFPL1
zf-RING_2
PHD_NSD
zf-HC5HC2H_2
zf-HC5HC2H
PHD
Motif
Other DBs
NCBI-GeneID:
108623248
NCBI-ProteinID:
XP_026667858
UniProt:
A0AAJ7RY13
LinkDB
All DBs
Position
Unknown
AA seq
254 aa
AA seq
DB search
MDDAEVVEHFYGVYLLYSMNPKYKGRTYIGYTVDPRRRIKQHNAGKDQGGAWKTSNRGPW
NMVLIIHGFPNSTSALRFEWAWQHPQVSRRLKHVPKKKSNQKVFDYCLLVASEMLNVGPW
RRLPLTIRWLDYDFFQQYSSHVSPPMHMPVCCGKVVSQKIKKSNDILQMLDESSLLCSIC
NSFLEDEDSVRCIKSTCSLMAHLICLAQLFSKDSMILPIEGTCPSCNTNILWGDLIRKKI
GCYGDLQEDDNDSA
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atggacgacgccgaagtagtagaacacttttatggtgtgtatttgttatactctatgaac
ccaaaatacaaaggaagaacatacataggatacacagtagatccaaggcgtaggataaaa
caacataacgctgggaaggatcaaggaggtgcttggaaaacgagtaacagaggtccatgg
aatatggtattgatcatccacggttttccaaacagcacctctgcactcaggttcgaatgg
gcctggcagcatcctcaagtgagccgaagattgaagcatgtgcctaagaagaaatcaaat
caaaaagtattcgactactgcttattagtagcgtcagaaatgttaaacgtcggcccgtgg
cgtcgtttgccattaacaatacgctggctggattacgatttttttcaacagtactccagt
cacgtgtccccgccgatgcatatgcctgtatgctgtggcaaagtagtttcgcagaaaatt
aaaaagtcgaacgatatactgcaaatgttagatgaatcgtctttactttgttcgatatgt
aattcgtttttagaagatgaggactctgttaggtgtataaagtctacgtgttcgttaatg
gctcacttaatctgtttagcgcaattattttctaaggatagtatgattttaccaatcgag
ggcacttgcccttcttgtaatactaatattttatggggtgacttgattagaaaaaaaatc
ggctgttacggagatttgcaagaagatgacaacgacagtgcttga
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