Ceratina calcarata (carpenter bee): 108623308
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Entry
108623308 CDS
T06061
Name
(RefSeq) CCR4-NOT transcription complex subunit 9
KO
K12606
CCR4-NOT transcription complex subunit 9
Organism
ccal
Ceratina calcarata (carpenter bee)
Pathway
ccal03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ccal00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
108623308
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccal03019
]
108623308
Messenger RNA biogenesis [BR:
ccal03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
108623308
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rcd1
TPR_IPO11
Motif
Other DBs
NCBI-GeneID:
108623308
NCBI-ProteinID:
XP_017877216
UniProt:
A0AAJ7IUW1
LinkDB
All DBs
Position
Unknown
AA seq
311 aa
AA seq
DB search
MTKMSSQHGPAALQSMVDREKVYTWIIELSNSETRENALLELSKKREVVPELAPMLWHSF
GTISSLLQEIINIYPAINPATLTAYQSNRVCNALALLQCVASHPETRSSFLQAHVPLFLY
PFLHTVSKTRPFEYLRLTSLGVIGALVKTDEQEVITFLLTTEIIPLCLRIMESGSELSKT
VATFILQKILLDDSGLSYICQTYDRFSHVAMILGKMVLSLAKDPSARLLKHVVRCYLRLS
DNPRALLALRQCLPDQLRDNTFATCLQEDASTKHWLNQLLKNLEAGPPQPVPPAQPGQQD
PRTIGMSPLTS
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgacgaaaatgagctcgcagcacggtccagctgcgttgcaatcgatggtggatcgagaa
aaagtatacacgtggataatcgagctgtccaattccgaaactagagagaacgctctatta
gaactgagcaagaaacgagaagtagtaccagagctggcaccgatgctgtggcactcgttc
ggcacgatctcgtcgctgcttcaagagataataaacatttaccctgctattaacccagct
accctgactgcctatcagagcaatcgcgtgtgtaatgcgttagctctcttacagtgcgtt
gccagtcatccggaaaccagatcttcgtttctacaggcccatgtgccgcttttcttgtac
ccgtttctacacactgtgagcaaaacacgaccgttcgagtaccttcgattgacaagtttg
ggagtgataggagctttggtaaaaactgacgagcaagaggtaatcacgtttctcctcacc
acggagatcatcccgctctgtttacgtatcatggaaagtggctctgagctgagcaaaacg
gtggctactttcatattgcaaaaaattctgctcgacgacagcggtctgtcgtacatctgt
caaacttatgatcgattcagccacgtcgcgatgatccttgggaagatggtgctgtctctg
gccaaggatccgtccgccagattgctgaagcacgtggttaggtgttacctgagactttct
gacaatccgagggctctgttagcgttgagacagtgtctgccggatcagctgagagataac
acgttcgcgacgtgtttacaggaggatgcatcgacgaaacactggttgaatcagctgttg
aagaatttagaggccggaccacctcaacctgtgccaccggcgcaacctggacagcaggat
cccaggaccatcggcatgtcacctctcacttcttaa
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