Ceratina calcarata (carpenter bee): 108623350
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Entry
108623350 CDS
T06061
Name
(RefSeq) nucleoporin p58/p45 isoform X1
KO
K14307
nucleoporin p58/p45
Organism
ccal
Ceratina calcarata (carpenter bee)
Pathway
ccal03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ccal00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
108623350
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccal03019
]
108623350
Messenger RNA biogenesis [BR:
ccal03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
108623350
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nucleoporin_FG2
Nucleoporin_FG
Peptidase_M61
Motif
Other DBs
NCBI-GeneID:
108623350
NCBI-ProteinID:
XP_017877285
UniProt:
A0AAJ7IVB5
LinkDB
All DBs
Position
Unknown
AA seq
488 aa
AA seq
DB search
MSSFTFGTPTTTANTSFSFGQKPATGFNLTSTPFGSTPPATTLSFGATATPATTAGLSFG
FSSTPASTAQTQPSLLLGSNTTATTTTTSLFPAPTTSAPLFGGLNFGTPAASTGLTFGST
AATTAGNVSFGAPTTTTSLFGGTGLLGSKPAGMTTTTTTATNKGLGGLDISQSNKGLSQG
NIHSATSKEIIWPPELLQTIDKFKEFVKEQKVLSSDIARGSPRPLNRCAQDTVSLMELLT
TLAGSVQRDRAAADKLRQDTARALQNAEIAQRTHDTPPGLQYENTAPLLFFMELVDSFEH
DLMLFRSQIETTEKHIQTMMTPKTLTPQELTMAMNKLHESLVAVAGKLQGVHSKVQQQKE
QYLNFRKYVLKDNTNVFDDIKSDGKTSRSSMLKVTSGPTPFSPGNKSFLSSTVMNFNRPG
SYETRNPLVWGNTTPSATNVNLGSSFKPPTAGLSFNAPSNFTAPLATSETSSSFQLQKPP
IGNKRGKH
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcgttcacgtttggaacaccgacgaccaccgccaacacgagtttttccttcggg
caaaaacctgcaacaggttttaacctaacaagtacaccgtttggctcgacgccaccagct
acgacgttgagtttcggagctaccgcgactcccgcgacgacagctggtctcagtttcgga
ttcagcagtactcccgcatcaacggcacaaacgcagcccagcttgttgctaggctcgaac
acaaccgcgacgacgactacaacaagtttatttccagctcctactacctctgcacctttg
ttcggtggcctcaacttcggcacaccagcagccagtactggtttgacgttcggttctacg
gctgcgactactgctggaaatgtcagctttggtgctccaactactacgacctcccttttc
ggaggtactggtttacttgggtcgaagccagcaggcatgactacgaccaccacgactgct
acaaacaaaggattaggaggattggacatatctcaaagcaacaaaggtctctcacaggga
aacattcattctgctacgtctaaagaaatcatctggccaccagaattgttacagacgata
gacaaattcaaagagtttgtaaaggagcagaaggtactctcctcggatatagccaggggg
tctccgagaccgttgaacagatgcgcgcaagacacagtgtccctgatggaactgttgact
actctggccggatccgttcagcgggatcgtgcagccgctgacaaattgaggcaggacacg
gcgagggcgttgcagaatgctgagatagcgcagaggacgcacgacactccgcctggattg
caatacgaaaacaccgcgccgttattattcttcatggaattggtcgacagcttcgaacac
gacttgatgctgttcaggtctcagatagaaaccaccgaaaaacatatacagaccatgatg
actcctaaaactctaacgccgcaagaattaacgatggcgatgaataaactccacgaatcg
ctcgtagcagtcgccgggaagttgcaaggcgttcactcgaaagtgcagcaacagaaggaa
caatatttaaattttcgaaaatacgttttaaaagacaatactaatgtgtttgacgacata
aagtccgatgggaaaacctcgaggagcagtatgctaaaagttaccagcggcccaactcca
tttagtccaggaaacaaatcttttctctcgtcgacagtgatgaacttcaacagacccggt
agctacgagacacggaatccattagtttggggaaatacgacaccgtctgctactaatgtt
aatctaggttcatcgttcaaaccgccgaccgcgggtctctcgtttaacgcgccgtcgaat
ttcaccgcgccattggccaccagtgaaacgagctcgagttttcaactacaaaaacctccg
atcggtaataaaagggggaaacattga
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