Ceratina calcarata (carpenter bee): 108623523
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Entry
108623523 CDS
T06061
Name
(RefSeq) LOW QUALITY PROTEIN: splicing factor 3B subunit 3-like
KO
K12830
splicing factor 3B subunit 3
Organism
ccal
Ceratina calcarata (carpenter bee)
Pathway
ccal03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ccal00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108623523
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccal03021
]
108623523
03041 Spliceosome [BR:
ccal03041
]
108623523
03036 Chromosome and associated proteins [BR:
ccal03036
]
108623523
Transcription machinery [BR:
ccal03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
108623523
Spliceosome [BR:
ccal03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
108623523
Complex B
108623523
Complex C
U2 SnRNP specific factors
108623523
Chromosome and associated proteins [BR:
ccal03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
108623523
TFTC complex
108623523
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
CPSF_A
Beta-prop_RSE1_2nd
Beta-prop_BBS7
Beta-prop_VPS8
Motif
Other DBs
NCBI-GeneID:
108623523
NCBI-ProteinID:
XP_026668172
UniProt:
A0AAJ7RYP1
LinkDB
All DBs
Position
Unknown
AA seq
1118 aa
AA seq
DB search
MYLYNLTLQRATGITHAVHGNFSGSKMQEILVSRGKSLELLRPDPNTGKVHTLLTVEVFG
IIRSLMAFRLTGGTKDYIVVGSDSGRIVILEYIPAKNVFEKVHQETFGKSGCRRIVPGQY
LAIDPKGRAVMIGAIEKQKLVYILNRDPEARLTISSPLEAHKSNTLVYHTVGVDVGFDNP
MFACLEIDYEEADSDPTGDAAVKTQQTLTLYELDLGLNHVVRKYSEPLEEHANFLVSVPG
GNDGPSGVLICSENYLTYKNLGDQHDIRCPIPRRRNDLDDPERGMIFVCSATHKTKSMFF
FLTQTEQGDIFKITLETDEDMVTEIKLEYFDXPVAASMCVLKTGFLFVASEFGNHYLYQI
PHLGDDDDEPEFSSAMPLEEGDTFFFAPRPLRNLVLVDEMDSLSPIMACQSSSSLLLHSA
QVYPDGIRHIRADKRVNEWKAPGKKTIVKCAVNQRQVVIALTGGELVYFEMDPTGQLNEY
TERKKMPSEVMCMALGNVAIGEQRSWFLAVGLQDNTVRIISLDPSDCLAPRSMQALPAAA
ESLCIVEMGAKDANNSEELSLQHSSLYLNIGLQNGVLLRTVLDPISGDLADTRTRYLGSR
PVKLFRIKMQGNQAVLAMSSRSWLSYYYQNRFHLTPLSYESLEFASGFSSEQCPEGIVAI
STNTLRILALEKLGAVFNQISFPLEYTPRQFAIHSDSAHLIIIETEHNAYTEETKQQRRL
QMAEEMQEAAGVEEAAVARELAEAFLSEEPNEAVFGAPRAGPGFWASLIRIIAPTRTFEI
HRLEQNYVAYCLSLVKFMNQGDQLFLIVGVAKDFQLNPRVSTGGFLYTYKVNAECTSLEL
VHKTILDEVPLAICPYQGRVLIGVGRMLRLYDMGKKKLLRKCENKHIPNAVVSINAIGQR
IYVSDVQESVYAVRYKRQENQLIVFADDTHPRWITTTCVLDYDTVATADKFGNIAVIRLA
SGINDDVDEDPTGNKALWDRGLLNGASQKADTAACFHVGETVMSLQKATLIPGGSESLVY
TTLSGTVGVLVPFTSHEDHDFFQHLEMHMRSEHPPLCGRDHLSFRSYYYPVKNVIDGDLC
EQFNSIEPAKQKSISGDLERTPSEVSKKLEDVRTRYAF
NT seq
3357 nt
NT seq
+upstream
nt +downstream
nt
atgtatttgtacaatttgaccctccaacgtgccacaggtattacccatgcggtacatggg
aacttctctggcagtaaaatgcaagagattttggtttcccgcggcaaatctttagaatta
ttaagaccagatccaaatactggaaaagttcatactttattgaccgtcgaagtatttgga
atcatacggtcgctcatggccttcaggctgaccggtggcacgaaagattacatcgtcgtt
ggatcagactcgggacggattgtaattttagaatatattcctgccaaaaatgtttttgag
aaagtgcatcaagaaactttcgggaaaagtggttgcagacgaatcgtacctggacaatac
ttggccatagatcccaaaggaagagcagtaatgataggagcaattgagaaacagaaactt
gtttatattttaaacagagaccccgaagctcgtctgacgatctcgtcaccgttggaagcg
cacaagagcaacacattggtttaccataccgtgggagtagatgtaggtttcgacaatcct
atgtttgcctgtctagaaatcgattacgaggaggcagatagcgatcctacgggagacgcg
gcagtaaaaacgcaacaaacgttgactctgtatgagctcgacctcggtttaaatcacgtc
gtacgaaaatacagcgagccgctggaagaacacgcaaattttcttgtgtcggtacctggt
ggaaacgacggtcccagcggcgttctaatttgttccgagaactatttgacgtacaaaaat
ttgggggatcaacacgatattcgttgcccgatccctagaagacgtaatgatctcgacgat
ccggaaagaggcatgatattcgtgtgctcggccactcacaagaccaagagcatgttcttc
ttcttgactcaaacggagcaaggagacatattcaagatcacgctggaaactgacgaggat
atggttactgaaattaaattggagtacttcgatnngccggtcgcggcgagcatgtgcgtt
ttaaaaacgggattcttattcgtagcttcggagttcggtaatcattacctctatcaaata
ccgcatttaggagacgatgacgatgaaccagaattcagttccgctatgccactggaagaa
ggtgatacgttcttctttgcaccgaggccactcaggaatttagtattggtcgacgagatg
gacagtttatccccgataatggcgtgtcagtcttcatcatcattgttattacattctgct
caggtgtaccccgacgggatacgtcacatacgagcggacaagcgagtgaacgagtggaag
gctcccggtaaaaagactatagtaaaatgcgcggtgaatcagcgtcaggtggtgatcgcg
ctcaccggaggagaattggtatacttcgagatggatcccacgggacaattaaacgaatat
acggagagaaagaagatgccgtcggaagtaatgtgcatggcgctgggtaacgtggcgatc
ggtgaacagagatcttggttcctggccgtcggcctccaggataacaccgtcagaataatc
tctttggacccttcggactgtctagcgccgagaagcatgcaagctctgccggcagccgcg
gagagcttgtgcatcgttgaaatgggtgccaaggatgcaaacaattccgaggaactatcg
ctccagcactcgagtctttacttgaacataggtttgcagaacggcgtattattgaggacg
gtactagatcctatctcgggtgatctcgcggatacgcgtactcgatatttgggttctcga
ccagttaagttgttcagaataaagatgcaaggaaatcaagccgtgcttgcgatgagcagc
cgatcctggctgagctactactaccaaaatcgttttcatctgaccccgttgtcttacgag
agcctggaattcgcgtctggcttcagttccgaacagtgtcccgagggcatcgtcgcgatt
tccacgaacactctcaggattctcgctctcgagaagctgggagcggtgttcaatcagatc
agtttccctctcgagtatacaccccgtcaattcgcgatccactcggattcggcgcatctt
ataatcatcgaaacggaacacaacgcgtacacggaggaaaccaagcaacagaggaggttg
cagatggccgaggagatgcaagaagccgcgggtgtggaagaagctgccgtcgcgagggag
ttggcggaagcgttcttgtccgaggaaccgaacgaagccgtattcggtgcgccgagagct
ggcccaggcttttgggcatctttgatcagaataatagcgcctaccaggactttcgagatt
catcggttggagcaaaactatgtcgcttactgcttgagtctcgtaaagttcatgaatcag
ggcgatcagctgttcctcatcgtaggcgtggcgaaggatttccagctgaatccaagagtc
agcaccggtggtttcctctacacgtacaaagtgaacgcggagtgtaccagtctggagcta
gtgcacaaaactattttggacgaggtacctttggctatttgcccgtatcagggaagggtg
ttgatcggtgttggcaggatgctacgattgtacgacatgggcaagaagaaacttctgcga
aagtgcgagaacaagcacattcctaacgccgtcgtttccatcaacgctatcgggcaaagg
atttacgtgagcgacgttcaggaatccgtttacgctgtcagatacaaacgtcaagagaac
cagctcatagtcttcgccgacgacacgcatccgaggtggataacgacgacgtgtgtactc
gattacgataccgtcgctactgccgataaatttggaaatattgccgttattcgtttggcg
agtggaatcaatgacgacgtggacgaagatccgactggtaacaaagctttatgggaccga
ggtttgttaaacggcgccagccaaaaggctgacacggccgcttgtttccacgtcggcgag
acggtaatgtctttgcaaaaggccacccttattcctggcggctcggagagcttggtctac
acgacgttgagcggaaccgttggcgttctcgtcccgtttacgagccacgaggatcacgac
ttcttccaacacttggagatgcacatgcgatcggaacatccacccctatgcggcagggat
cacttgtccttcaggtcgtactattatcctgtgaaaaacgtgatcgacggggacctctgc
gagcagttcaactctatcgagccggcgaaacagaagagcatatcgggcgatctcgagcgt
acgccgtccgaggtatcgaagaagctcgaggatgttcgtacacgatacgccttctaa
DBGET
integrated database retrieval system
