Ceratina calcarata (carpenter bee): 108623911
Help
Entry
108623911 CDS
T06061
Name
(RefSeq) putative ATP-dependent RNA helicase TDRD12
KO
K18409
ATP-dependent RNA helicase TDRD12 [EC:
5.6.2.5
]
Organism
ccal
Ceratina calcarata (carpenter bee)
Brite
KEGG Orthology (KO) [BR:
ccal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ccal03036
]
108623911
Enzymes [BR:
ccal01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.5 RNA 5'-3' helicase
108623911
Chromosome and associated proteins [BR:
ccal03036
]
Eukaryotic type
Gene silencing
piRNA pathway
108623911
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
TUDOR
Helicase_C
NdhM
DUF4537
Motif
Other DBs
NCBI-GeneID:
108623911
NCBI-ProteinID:
XP_017878258
UniProt:
A0AAJ7IVP5
LinkDB
All DBs
Position
Unknown
AA seq
996 aa
AA seq
DB search
MFEAVTIMIPYSAVLVKVTNVLTPYIMRIMYDTKYNDERLDFIAEKLIAKEIIFNNDTND
IEPKVGDAVIVHSKFNKRIFIPSRLCRGYISSIKDSRKLYNVMLSDYGVCIRARRDDFFL
CPDDLISEEHFSFTVGLYNVLPVSAKNGSLANNKVSSVSKGWCLPAIEYTRNLISASAVI
YYHRLAFDEHGKSYGEFYLTIKDRVISLSKALVSNHYAIYLDEALQTIEGPMSNGKLDVE
IFNDETDLSKIPSNNLKEENKSKPVVRKETHLHHVSHKFVGHEEHVFLCGREDCKKLNSV
VDAEFPTSIHMTWNKSMKSSKPKKMQSFIWPAIKEGVSVAAIGPPKSGKTLGYAFPISGC
LAADSELPQGLKPSAVILCSSSQQVIEVYFLFKTFLEKYKKIKIVTAVNNKSYRSIAAEI
YNGCQILISTPSVLGRFMNNNKAMLDFKYLRYLVFDSADVILDKYFNSVSRLFAKHNILC
NRESGKLQLIITATNCTTQLKKFISALMKDPLICITSCLEAALFKSVSMNVCVVNSEKKN
EKLLDLLGNKYLQSRTAVICRSSKEAESLRRLLSKRVETLIATENTNMFGLNEIKTYWNG
CVIGSYPLLVCTDSVLSDLNITNVTNLIHYSIPSTSKTSFCFRFSVLLDNLRTESGICKV
NILFDESNDVQYIYIVRMMRRVNITVPDNMLKTVELVAAALETKKRNHPICNQIKYWGFC
DKQSFCEFRHKIIKCIDDPITDIQMDDEVKFRLINIHSPIHFSVRIVSYIKKATKDEIQF
SNIEYMQITFKLQRFYSSSENRKTCEVINVGSIYGLEEPVGTFNRVQIIRIAKYETENPK
CVDVRCLDSGLLLQNILVSKLLQMPEKLANYPVHTVELFLTGIIPPDNEYVWNNHSFDYV
YQWFKEHVDDDSYIIGTVKLHLGHTMWMETLKVGTKVIGYKDLIGSSLRAELLRQNHAVE
NTKHINQLYKMCRDGGYSEINGRNLDTLLIEERVCP
NT seq
2991 nt
NT seq
+upstream
nt +downstream
nt
atgtttgaagcagttacaattatgataccatattcagctgtattagttaaggtgacaaac
gttttaacaccttatattatgagaataatgtatgacacaaaatataatgatgaaagattg
gattttatagcagagaagttaatagcaaaagaaataatatttaataatgatactaatgac
atagaaccgaaagtaggagatgcagttatagtgcatagcaagttcaataaacgaatcttc
attcctagtagactatgtagaggatatattagcagtattaaagactccagaaaattatac
aatgttatgctgtctgattatggcgtttgcattagagcacgaagagatgacttcttttta
tgtccagatgatttgatttcagaagaacattttagctttacagttggcctatataacgtt
ttacctgtttctgctaaaaatggttcattggcaaataataaagtttcaagtgtttcaaaa
ggctggtgtttgccagcaattgaatacacaagaaacttaatcagtgcatctgcagtgatc
tattatcatcgtttggcatttgatgaacatggaaaatcttatggtgaattttatctcacc
attaaagatagggtcataagcttaagtaaagctttagtttctaatcattacgctatttat
ttggacgaagcgttacagactatagaaggtcctatgagtaatggaaaactggatgtcgaa
atatttaatgatgaaactgatttaagcaaaatacccagtaataatcttaaggaagaaaac
aaaagcaaaccagtcgttagaaaggaaacacatttgcatcatgtttcgcataaatttgtg
ggccatgaagaacacgtctttctttgtggaagggaagattgcaaaaagttaaattctgtt
gtagacgcagaatttcctacaagtatacacatgacttggaacaaatcaatgaaatcatct
aagcctaaaaaaatgcaatcattcatttggcctgctataaaggaaggcgtgagtgtggcc
gcaattggaccgccgaaatctggcaaaactcttggatatgcatttcccatttctggatgc
ttagccgcagattcagaactacctcaaggcttgaaaccatctgcagtgatactgtgttct
tcatctcagcaagtgattgaagtttatttcttatttaaaactttcctggaaaagtataaa
aagataaaaatcgtaactgcagttaacaacaagtcttatagatcaatagcggctgaaata
tataacggttgccagatattaatatccacaccatccgttctaggacgtttcatgaataac
aataaagctatgttggacttcaaatatctccgatatttagtgttcgacagtgctgatgtc
attctcgataaatattttaattcggtgagcagattgtttgcgaaacataatattttgtgt
aacagagaatcagggaaattgcaacttataataactgctacgaattgcacaacacagttg
aaaaaattcatttctgctctaatgaaagatccattaatatgcataacatcgtgcctggaa
gctgccctttttaaatctgtaagcatgaatgtatgtgtagtaaactcggagaaaaaaaat
gaaaaacttttagatctgctgggtaataaatatttacaatctaggactgcagtaatttgt
agaagtagtaaagaagcagaaagtttacgtagattgttatcaaagcgagtagagactctc
atagccactgagaatacgaacatgtttgggttaaatgagatcaaaacatattggaacggt
tgtgtaattggttcctatcctcttttagtatgtacggacagtgttttatcagatttaaat
attacgaatgtgactaatttaatacattattcaattccttcgacgtcaaaaacttcattc
tgtttccggttttcggtacttctcgataatttacgaacggaaagtggcatttgcaaagta
aatatattgtttgacgagagtaacgacgtacaatatatatatattgtaagaatgatgaga
cgtgtaaatattacagtacctgacaacatgttaaagacagtcgagcttgtggctgctgct
ttagaaacgaagaagaggaatcatcccatctgcaaccaaataaagtattggggattctgt
gacaaacaaagcttttgcgaatttagacataaaataattaaatgtattgacgatccgatt
acggatatccaaatggatgacgaggtaaaatttcgtctaatcaacattcacagtccaata
cacttttcagtgaggattgtatcgtacataaaaaaagccacgaaggatgaaatacaattt
tctaatattgaatacatgcaaattacattcaagttacaaagattctattcttccagtgag
aacagaaaaacatgtgaggtaataaatgtgggaagcatatatggcttagaagagccggta
ggtactttcaacagagtacaaattataaggattgcgaaatatgagactgaaaatccaaaa
tgcgtagatgtaaggtgtcttgatagcggactattattacagaacatacttgtatcgaaa
ttattacaaatgccagaaaaacttgcgaattatcctgtgcacacagtagaactgttttta
actggtataattccacccgataacgaatatgtttggaataaccattcatttgattatgtg
tatcagtggtttaaggaacatgtcgacgacgactcttacataatcggaacggtaaagctg
catctgggacatacgatgtggatggaaactttaaaagtgggaacaaaagtgatcggatat
aaagatttgatcggttcttcactgagagcagaattattacgtcaaaatcatgcggtcgaa
aatactaaacacataaatcaattatataaaatgtgtagggatggtggatactcggaaatc
aatggtcgcaacttagatacattgctaattgaggaacgcgtatgtccgtaa
DBGET
integrated database retrieval system
