Ceratina calcarata (carpenter bee): 108623988
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Entry
108623988 CDS
T06061
Name
(RefSeq) nuclear cap-binding protein subunit 1
KO
K12882
nuclear cap-binding protein subunit 1
Organism
ccal
Ceratina calcarata (carpenter bee)
Pathway
ccal03013
Nucleocytoplasmic transport
ccal03015
mRNA surveillance pathway
ccal03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ccal00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108623988
09122 Translation
03013 Nucleocytoplasmic transport
108623988
03015 mRNA surveillance pathway
108623988
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccal03019
]
108623988
03041 Spliceosome [BR:
ccal03041
]
108623988
Messenger RNA biogenesis [BR:
ccal03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
108623988
Spliceosome [BR:
ccal03041
]
Common components
Common spliceosomal components
Cap binding complex
108623988
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G_like_2
MIF4G_like
MIF4G
Dehydrin
Motif
Other DBs
NCBI-GeneID:
108623988
NCBI-ProteinID:
XP_017878391
UniProt:
A0AAJ7N5A7
LinkDB
All DBs
Position
Unknown
AA seq
794 aa
AA seq
DB search
MSRRRVHEEEDGYERAYKKRRRVSENQEIEDRLESLILRVGEKSTSSLESNLEGLASVLE
ADLGLFRSKILRILTECAIKMPEKCTIYTTLVGLLNAKNFNFGGEFVDYMVKNFKDALKG
CRWDVARYSLRFLADLANCYVLSCGSLMQLFDNMLDAANEDGVPQVRRDWYVYAVLSTLP
WVGRELYEKKEQELDRLMVTIEIFLNKRSKKHQPALRVWSSDTPHPQEEYLDCLWAQVRK
LRQDNWAEKHIPRPYLAFDSILCEALQHNLPTIMPPPHHESYSYPLPTVVFRMFDYTDCP
AEGPLLPGSHAIERFLIEEHLRQIINNYFFERKDCAAQLLNFPYKAKIPLDYCIVEVIFG
ELFRLPAPKNLEICYGSILIELCKLQPSTMPQVLAQATEILFRRIDSMAAAAFDRFVWWF
AYHLSNFQFRWSWEDWDSCLQRDPEHPRPKFIREVLLKALRLSYYQRIRDMMPESYVELI
PAPPEPIYKYSSEGASSLPGTAAAHELVVSIRRKCTPEEVLNVLNTLPGPKENEETNNFN
PLKIDVFVQTLLNLGSKSFSHSFAAIGKFHYVFQVLAETEEAQICILRNMYALWKNHYQM
MVVLTDKFLKTGIIECSAIANWIFSKEMASEFTKLYIWEILHLTIRKKNKHVTKLSTELA
EAREKLRRAESRSGSSSEDEDNNKDRNREKPSEDVIERMEEKLETAQADQKNLFLIIFQR
FIMILSEHLGRCDTDGIDYNTHWYKWTIGRLQQVFLTHHEQVQKYSSTLETLLFTPDLDP
HILDVFHQFVSLRA
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgcagaagagttcacgaagaggaagatggatatgaacgagcgtacaagaaacgt
agaagggtatcagagaatcaggagatcgaggaccggctcgagtctctcattctaagagta
ggagagaaatctacgtcgtctctggaaagcaatcttgaaggcttagcttcagtattagaa
gctgatctcggattgtttcgcagtaaaatacttagaatcttgacagagtgtgcaatcaaa
atgccagagaaatgtacaatttataccactctcgttggtttgctgaacgctaagaacttc
aattttggtggtgaatttgttgactatatggtaaagaatttcaaggatgcattgaaagga
tgtagatgggacgtagccagatattcactaagattcttggcagatttagcgaactgttat
gttttgtcttgtggatcgttgatgcaactatttgacaatatgttagatgctgccaatgaa
gatggtgtacctcaagttaggcgcgattggtatgtgtatgctgtgttgtcgacattacca
tgggtcggaagagaactgtatgagaaaaaagaacaagagttggatcgtttaatggtcact
atagaaatatttttaaacaaaagaagcaaaaaacaccagccagccttaagagtatggtcg
agtgatactccccatccccaagaagagtatttagattgtttatgggcacaagtgagaaaa
cttagacaagataattgggcagagaaacatattcctcgaccatacctcgcgtttgactca
attttatgcgaggcattgcaacacaatttgcccactataatgccaccgccgcatcacgag
tcttactcttacccattgcctacggtggttttccgcatgttcgattacaccgattgcccg
gctgaaggtccattgttacctggaagccacgctatcgaacgattcctcatagaagaacat
ctcagacaaatcatcaacaactattttttcgagaggaaagattgcgctgctcaactgttg
aactttccgtacaaagcgaagataccattagactactgtattgtcgaagtaatatttggc
gaattattcaggctaccggcaccaaagaatttagagatctgttacggatcaattttgatt
gagctttgtaaattgcaaccatcgacgatgccacaagtgttggctcaggcgacagagatc
ttgttccgtcgcatagatagcatggctgccgctgctttcgatcgtttcgtgtggtggttc
gcgtatcatttgagcaacttccagttccgttggtcttgggaggactgggattcgtgtctg
caacgcgatccggaacatccgcgtccaaaatttattcgggaagtactcttgaaagcttta
cgtttgtcgtactaccagaggatacgtgatatgatgccggaatcttatgttgaactgatc
cccgcgcctccggagcctatttacaaatactcatcggagggagccagttctcttccgggt
acagcggcagctcacgagttagttgtgtcgatcaggaggaaatgtacgccagaagaagtg
ctgaacgtattgaatacgttaccaggtccgaaggagaacgaagaaacgaacaatttcaac
ccattgaaaattgatgtttttgtacaaacgttactgaacttaggctcgaaaagttttagt
catagtttcgcggcaatagggaagttccattatgtttttcaagtccttgccgaaaccgag
gaggctcagatatgcatactgagaaatatgtacgccttgtggaagaatcattatcaaatg
atggtggtcctcactgacaaattcttgaagacgggaatcatcgaatgcagtgccattgcg
aattggatattctcgaaggagatggcatccgaatttactaaattatatatttgggaaatt
cttcatttaacgatacgaaagaaaaataaacatgtgacgaagttgagtacagaattagcg
gaagcacgtgagaagttgagaagagcggagagtagatcgggatcatcgtcggaggatgaa
gataataataaagacagaaacagggaaaaaccatcggaagatgttatagagagaatggag
gaaaagctggaaactgctcaagcggaccagaaaaatttattcctaatcatctttcagcgt
tttataatgatcttatcggagcacttaggacgctgcgataccgatggtatagactataat
actcattggtacaaatggactataggtagattgcaacaagtatttctgactcatcatgaa
caagttcaaaaatattcgtcaacattagagactttacttttcacaccggatttggatcct
cacatcctggatgttttccatcaattcgtttctctacgagcgtga
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