Ceratina calcarata (carpenter bee): 108624037
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Entry
108624037 CDS
T06061
Name
(RefSeq) ubiquitin conjugation factor E4 B
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
ccal
Ceratina calcarata (carpenter bee)
Pathway
ccal04120
Ubiquitin mediated proteolysis
ccal04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ccal00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
108624037
04120 Ubiquitin mediated proteolysis
108624037
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ccal04121
]
108624037
Enzymes [BR:
ccal01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108624037
Ubiquitin system [BR:
ccal04121
]
Ubiquitin ligases (E3)
U-box type E3
108624037
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ufd2P_core
U-box
Glyco_hydro_67N
Motif
Other DBs
NCBI-GeneID:
108624037
NCBI-ProteinID:
XP_017878482
UniProt:
A0AAJ7N5X7
LinkDB
All DBs
Position
Unknown
AA seq
1114 aa
AA seq
DB search
MSELSQEEVRRRRMARLAGLDTIGSTANSNHNNAPSVSPASVSPVSPVLSMSPISPNTPG
PSKAYTDQIVPNIKQQQFQNPEAPMEVEENNDKQCCSSGMDVDSGIENMEVEDNDRKDLK
PRSRTTSSSTEVTTEQIHAVITRVLRISWKEPMEGCIFLPQTSAYASSTKLVDYTEIINQ
GLMEVLCMFIRDEDPLKDIVMETSSDREDSPNSQTSSLQSPFTTFCRCDMCCKSSQPKSL
TYLLDCYSKIATEERNHPKKSSTPPLSDVLTALRAQCVQYSSLVLQGLVGISQSCTTYPF
AMTPLLYPVLSQSLPRGYLHELVSRTHTNTTVFNQIFTPLLQGLYLSMHQNSLIRNTHRK
PIEALEDLIEIRCGPSSNIRPVCRLIVTQVQFLPDIMTTAAGREITTTSLLGPFLSVSVF
AEDQLNDKFFVDQSVHLTLQQELEGIRTSLHKIFHAILASTNCREAMLTYLATLLRYNEK
RAQIQTEEFSLAGDGFMLNLLSVLQKLSVKIKLDTIDPLYPFHPASFVEIKNETRLKLSS
QEVQEWMKHLERTHKWVEPKFPTQCWFLTLHCHHIALLPALQKYQRKLRTIRDVQKMLDD
LQTTEPQWKDSPFAGRNKELIERCKEQLKLLGQSKSCADAGLIDPVLFRRCLHFYISVAE
ILLSLLTQTPPGNPIPELPLPQEVPQKFTALPEWYVEDIAEFVLFSLQFSPSVIVNNMDN
SLITWLLVVVCTPHCIRNPYLIAKIIEVLFVINPNVQGRTESLHDQVMAHPISKTVLASY
LMKFYTDVETTGSSSEFYDKFSIRYHISLILKSMWDSPVHRESIINESNNGKQFVKFINM
LMNDTTFLLDESLESLKRIHEIQELMSDLKSWSQFSREQQRSRMKQLAADERQARSYLTL
AKETVAMFHYLTDDITEPFLRPELVGRLCAMLNFNLQQLCGPKCKNLKVRIPQKYGWEPR
ALLSQLVDIYLHLDCEIFAAALATDERSFCKELFTDAAHRLERAVIKSTIEIERFIALAE
RAADIARDNRARDEDYGDAPEEFRDPLMDTLMDEPVKLPSGIVMDKAVIIRHLLNSSTDP
FSRQPLSEDMLTPMPELKERISMWKQQKKKPTNI
NT seq
3345 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagttaagccaagaggaagtaagaagaaggcgtatggctcgtttagcaggtctg
gacaccatcggttcaacagctaattcgaatcataacaacgcaccttcagtatctccagca
tctgtatctccagtgtctccagtattatctatgtctccgatatctccaaatacaccaggc
ccttcgaaggcgtacacagaccagatagtaccaaacataaaacagcaacaatttcaaaat
cctgaagcaccaatggaggtagaagaaaataatgacaagcaatgttgcagttctggtatg
gatgtagactctggaattgaaaacatggaagtagaggataacgatagaaaagacctaaaa
ccgagatcacgcactacgagctccagtacagaggtaacgacagaacaaatccacgcagtt
atcacgcgcgtactacgcatatcatggaaagaacctatggaaggttgtatattcttacca
caaacatcggcgtatgcatcgtcaacaaaactcgtcgattacacagagattattaatcaa
ggattgatggaggttctgtgtatgttcataagagacgaggatcctctgaaagatatcgtt
atggaaacgtcttcggatcgggaagacagccctaatagtcagacgagctcgttacaaagt
ccgttcacgacgttttgtcgttgcgatatgtgctgtaaatcatcgcagcctaagagtctc
acttatttattagattgctattcgaaaatcgcaaccgaagaacgaaatcacccgaagaag
tcgagtacaccaccattgtccgatgtgctgacagctctccgggcgcagtgtgttcagtat
tccagtcttgtgctacaaggcctagtcggcatttctcaatcttgtacgacgtatccattc
gccatgacgcctcttctatatcctgtcctctcgcagagtttaccacggggttatctacac
gagcttgtgtcgagaacgcacacgaatacgacggtgttcaatcaaattttcacgccgctt
ctccaaggattatatctgtcgatgcatcagaacagcttgatccgaaacacgcatcgaaag
ccgatcgaggcgttagaagatttaatagaaattcgttgtgggcccagcagcaacatacga
ccagtgtgccgtttaattgttactcaagtacaatttttacccgacatcatgacgacggcc
gctggccgggaaattacgacgacctctcttctcggacctttcctctcggtttctgtgttc
gccgaagatcagctgaacgacaagttcttcgttgaccagtcggtgcatctaacgttgcag
caagagctggagggcatcaggacttcgttacacaagatatttcacgcgatactcgcgagt
actaattgtcgtgaagctatgctgacgtacttggcgacgttgttacgttacaacgagaaa
cgtgctcaaatacaaacggaagaattttccctcgctggtgatggattcatgttgaacttg
ttatcggtgttgcaaaagctttcggtgaagatcaaattggacacgatcgatccgttgtat
ccgtttcatccggcgagtttcgtcgagattaagaatgagacaaggctaaaattaagtagc
caagaagttcaggaatggatgaaacatttagagaggacgcacaagtgggtcgagccaaag
tttccgacacaatgttggttccttactctacattgtcaccatatagcgttgttaccggct
ttacagaaataccagagaaagctgaggactatacgcgacgtgcagaaaatgctcgacgat
ctacaaacgactgaaccacaatggaaagacagtcctttcgctggtcgtaacaaagaattg
atcgaacgttgcaaggagcaattgaaactgcttggccaatcgaaatcctgcgccgacgct
ggattgatcgatcccgttttgtttagaaggtgcttgcacttttacatttccgtggcagag
atactgcttagtttattgacacaaactccgccaggaaacccaattcctgaactgcctttg
cctcaagaggtaccacaaaagttcacagcactaccagagtggtacgtcgaagatattgct
gaatttgtattatttagtcttcaattcagtcctagcgtgatagtgaacaacatggataac
tccctcatcacatggttgctagttgtagtttgtacgccgcattgtatacgaaatccatat
ttaattgcaaaaattatcgaagtacttttcgtaataaatcccaatgttcagggtcggacc
gagtcactccacgaccaagtgatggcacatccgatatctaaaacggtactggcatcgtat
ctgatgaagttctacacggacgttgaaacgaccggatctagttcagaattctacgacaaa
ttctcaatccgttatcacattagtttaatattgaaatccatgtgggacagtccggtgcac
cgggaatctatcatcaatgaaagcaataacgggaagcaattcgtgaaattcattaacatg
ttgatgaacgataccacgtttctgctcgacgagagcctggagtcgttgaagcgcatacac
gagatccaagagctgatgtccgacctgaaatcgtggtcgcaattttcccgcgaacaacaa
cgttcgcggatgaaacaattggccgcggatgagaggcaggccagatcgtacctgacctta
gcaaaggagaccgttgctatgttccattatttaacggacgacattactgagccattttta
cggccagaattagtcgggaggttgtgtgccatgttaaactttaatctgcaacaactatgc
ggccctaaatgcaagaacctaaaagtacggataccgcagaagtacggatgggagccgaga
gctttactcagtcaattggtcgatatatatttgcatctcgactgtgagatattcgctgcc
gctttggccactgacgaacgttcgttttgtaaagaattattcaccgacgccgcacacagg
ttagagagagcggtaatcaagtctaccatagaaatcgagagattcatagcgctcgcggag
cgcgctgcggacatcgccagggataatcgtgctcgtgacgaggattacggcgatgcgccc
gaagaattccgagacccgctcatggacacgcttatggacgagccagttaaacttccatcc
ggtattgtcatggataaagcagttataattagacatcttctcaatagttctacagatcct
ttcagtcgacaaccgcttagcgaagacatgcttacaccaatgcccgaattgaaagagagg
atatcgatgtggaaacaacagaagaaaaaaccgacgaatatataa
DBGET
integrated database retrieval system
