Ceratina calcarata (carpenter bee): 108624435
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Entry
108624435 CDS
T06061
Name
(RefSeq) probable ATP-dependent RNA helicase DDX55 homolog
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
ccal
Ceratina calcarata (carpenter bee)
Brite
KEGG Orthology (KO) [BR:
ccal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ccal03009
]
108624435
Enzymes [BR:
ccal01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
108624435
Ribosome biogenesis [BR:
ccal03009
]
Eukaryotic type
Pre-60S particles
Helicases
108624435
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
DUF4217
ResIII
Helicase_C_2
Motif
Other DBs
NCBI-GeneID:
108624435
NCBI-ProteinID:
XP_017879215
LinkDB
All DBs
Position
Unknown
AA seq
593 aa
AA seq
DB search
MNYTMKTQNWNELEVSLSNPVLKTIEELKFLYMTPVQAASIPLLLKGKDVAAEAVTGSGK
TIAFLIPVLEILQKRKEKWKATETGAIIISPTRELAVQISEVLQQFLANIPGLKQALIVG
GTTVTEDADRLKTGANIIVATPGRLEDLLSNCKAINLAAYVKSLEILILDEADRLLDLGF
SATLDTILSYLPRLRRTGLFSATQTKELQQLIRAGLRNPALITVKEKPNISTPSNLKNNY
VIVNAEHKLSVMIDFIENEGIGSKYMIFLSTCACVDYFSHVIQTMLPSLRVFAIHGKMKN
KRYKVFKEFREAESGILICTDVMARGIDISEVDWVLQYDPPCSASSFVHRCGRTARIGNE
GNALLFLLETEDTYVDFIKRNQKVELQKIILEPSEISNEKCLKCMRDLQKQDRSLFDKAN
RAFVSYVQAYNKHECNLILRLKDIDLGKLAMGFGLLRMPRMPELKGKDLSSFEEENIDIN
TIEYSNKQKEKSRLEKLKVFRDSGVWPKQQKHKRKQTESWSEAKKKKLDKLENRKKRKEK
KLKQQVSTSVMKKQKRKINEEDIEDLARDIALIKKLKQKKISQEAFDVAFGID
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atgaattatacaatgaagactcaaaattggaacgaattagaggtgtctctgagtaacccc
gtgttaaaaactatcgaggaattaaaatttctgtacatgacacctgtccaggcagcctct
attcccttgttattaaagggaaaagatgttgcagcagaagcagtaacaggaagtgggaag
acgattgccttcttgatcccagtactagaaatactgcagaagagaaaagagaaatggaag
gctacagaaactggggcaataataattagccctaccagagaattagctgtacaaataagt
gaagtcttacaacaatttctggcgaacataccaggcttgaagcaagcattaattgttggt
ggcacgacagttacagaggatgcagataggcttaaaacaggtgcaaacattattgtagca
acacctggtagattagaagatttattatccaattgtaaagctataaacttggctgcctat
gtaaaatctttggaaatattgatcttggacgaagctgatagactattagatttaggcttc
tctgcgacactggacacgatactgagttacttaccacgtctgaggagaactggtttattc
tcagcgacgcaaacgaaggaattgcagcagctgataagagctgggctcagaaatccagct
ctgataactgttaaagagaaaccaaatatttccacgccgtcaaatttaaagaataattac
gttatcgtaaatgctgaacacaagttgtcagtaatgatagatttcattgaaaacgaagga
attggttcaaagtacatgatatttttatccacatgcgcgtgtgtcgattatttcagtcac
gttatacaaactatgttaccgtctcttcgagtctttgcgattcatggtaaaatgaagaac
aagcggtacaaagtgttcaaggaatttcgggaggctgaaagtggtattttaatttgcacg
gatgtaatggcacgtggtatcgatatttcagaagtagattgggtattacagtacgatcca
ccttgttctgctagcagtttcgttcatagatgcggtagaacagccaggattgggaacgaa
ggtaacgcattattatttctgttagagacagaagacacgtacgtagactttattaaaaga
aatcaaaaagtagagttacaaaaaataattttggaaccatcggaaatttccaatgagaaa
tgtttgaagtgcatgagagacttgcaaaagcaggaccgatctctttttgacaaagctaat
agagcgttcgtatcgtatgtccaagcgtataataaacacgaatgtaacttaatattgaga
ctgaaagatatagatttgggaaaacttgcaatgggtttcgggttattgcgaatgcctcgc
atgcctgaactcaaaggaaaagacttgtcgtccttcgaggaagaaaacattgacatcaat
acaattgaatattcaaataaacagaaagagaaaagtcgtttagaaaagttaaaagtcttt
cgagacagcggcgtatggcctaagcagcagaagcataaacgtaagcagactgagtcgtgg
tccgaggctaagaagaagaaattagataaactagaaaatcgtaaaaaacgtaaggagaag
aaactaaagcaacaagtgtcaacaagtgtaatgaagaaacagaaaaggaagataaacgaa
gaggatatcgaagatctagcaagagacatagcgttaatcaagaaattaaaacaaaagaag
atttcacaagaagcgtttgatgtcgcttttggaatcgattga
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