Ceratina calcarata (carpenter bee): 108624629
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Entry
108624629 CDS
T06061
Name
(RefSeq) hypoxia-inducible factor 1-alpha isoform X2
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
ccal
Ceratina calcarata (carpenter bee)
Pathway
ccal04137
Mitophagy - animal
ccal04140
Autophagy - animal
ccal04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
ccal00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
108624629
04137 Mitophagy - animal
108624629
04148 Efferocytosis
108624629
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccal03000
]
108624629
Transcription factors [BR:
ccal03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
108624629
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_3
PAS_11
PAS
PAS_9
PAS_4
HLH
PAS_2
Motif
Other DBs
NCBI-GeneID:
108624629
NCBI-ProteinID:
XP_017879539
UniProt:
A0AAJ7N663
LinkDB
All DBs
Position
Unknown
AA seq
1082 aa
AA seq
DB search
MEPPRKERKHKEKRRSNEKRKEKSRDAARCRRSKETDIFTEMAAALPVAPEQAAHLDKAS
VMRLAIAYLKVRSVVDSIPGPLAKSETNQMDELFTKAMNGFMLVLSNDGSIIYLSENVSD
YLGVSQMDMLGQSVYEYSHPCDHEELREYLSTKPSEITEKRVCSFFLRFKCTLTGKGRKV
NLKSASYKVIHCTGRLAHVRDPVSNSNTDEEDCRSDDEMIERDTGVSLVVLGCPIPHPSN
IEIPLGRQTFLSKHSLSMKFTYADEKLAEYLGWNSEELMGQSVFEFYHALDNFAMDKSFK
SLFSKGQCETVAYRFLGKRGGYAWVVTQATLIHCVKQQKPQSVVCVNYILSGVEREDEVY
SVRQLAARETEAKAVKPKKSEKRQIHVQIQVKLNTEKFVEDEFEDEELQECSLPTVKPEL
IPKTLDPVQSATSTDYGPASKPKKKLVQLQDGSRKDSTFPRPVQPSEKSSIGVQALKDSL
EESLKENSEPLPKRAASTPKPFVFQGKPAVEYDPETAVRQDRPHVVTRHLFASIASQPEP
QITCRPPPQTATASIFAPRTEDMNKGFLTFSEDQPGLTMLKDEPEDLTHLAPTPGDVCVP
LEDTPFLTDMLDEFILGNDNYCPLLSPCGTLAPELRSADFGDPLKDTELVESTRNKSLGE
SLADSDPFMYGDSPSSPCSIDPSTVSPPLTKYRQSPEQSIDSLGSPTCGSGAEGMSEDEM
LMLGLNDSIADDEMALRAPYIPMSDQDEALDLLISNDMVMWSPPQTTDQKNCLKWMVTEK
EQRTSDSSLAQLLKTDQVVSRKYNDHGGGLVNPVQVLGQIPRRNTNLDNCQWSSKVDRPT
KRIHTASIDTGNDNKRIKCEESAKHSSLEDQLLSKQPSSRKSSTLGSSQLLRRLVSQQNV
LRNNFANESFDGSTVNGRQSDDRMQLELNDGEGDSGGGDEDGGCRRNGESVDGKPSSQRN
SACNSVLMNLLVSGCDEKLTDSRSVPSIYPKSLATPLIVNLEDHQMVPQCSDSSGSSSPF
DQLSPIARKELSNAFIGQSIVSPASPIASFDGFDDYEPSMTASGLLQVEPDLFGSLLDRS
LA
NT seq
3249 nt
NT seq
+upstream
nt +downstream
nt
atggaacctccgaggaaagagaggaagcacaaggagaaaagaaggagtaacgagaagagg
aaggaaaaatctcgtgacgcggcacgatgtcgacgaagcaaagagacagacattttcaca
gagatggcagccgcccttccggtggcaccggaacaagcagctcaccttgataaggccagc
gttatgaggctagccatcgcctatttgaaagtgcgttcggtagtcgattcaatcccaggc
ccattggccaagtccgagacgaatcagatggacgagttgtttaccaaggcaatgaacggg
ttcatgttggtgctttcaaacgacgggagtatcatttacctctcggagaatgtcagcgat
tatcttggcgtctctcagatggacatgctgggtcaaagcgtgtacgagtacagccaccca
tgcgatcacgaggaattgcgtgaatacttgtccaccaaaccatccgagatcaccgagaag
cgcgtttgcagtttcttcctgagattcaagtgcacgctgaccgggaaaggaagaaaagtc
aacttgaaaagcgcttcttacaaggtgatccattgcaccggtagattagcgcacgttcgc
gatcccgtatcgaattcgaacaccgacgaggaggattgcagaagtgatgacgaaatgatt
gaacgagacacaggagtctctttggtggtacttggttgtcctataccgcatccaagtaac
atagagataccgttgggacgtcaaacattcctctcaaagcacagtctcagtatgaaattc
acctacgccgatgaaaagttggccgaatatctgggctggaacagcgaagagctgatggga
caatcggttttcgagttctatcacgccctcgacaatttcgccatggacaagtcttttaaa
tcactattcagcaagggccagtgcgagacggtagcctacagatttcttggcaaacgaggt
ggatacgcctgggtagtcacacaagccactttgatccactgtgtcaaacagcaaaaaccg
caatccgtcgtatgcgtcaattacatcctaagcggcgtggagcgcgaggatgaggtatac
agcgtgcggcagctcgcagcacgtgagaccgaggcgaaggcagtgaaaccgaagaagagc
gagaaacgtcagatccacgttcagattcaggtcaaactgaacaccgagaagttcgtggag
gacgagttcgaggacgaggaattgcaagagtgctcgttgcccacggtgaaaccggaatta
atcccgaaaacgctcgatcccgtgcaatctgcgacgagtacggattacggaccggcgagc
aaaccgaagaagaagcttgttcagcttcaggacggctcgcggaaggatagtaccttcccg
agaccggtccaaccttcagagaaatcatctatcggtgtccaagctcttaaagactcgctc
gaagagtcgctcaaggagaacagcgagcctctaccgaagcgagccgcctctacccccaaa
ccattcgtgttccagggtaaaccggcggtggaatacgacccggagacggcggtacgtcag
gacagaccccacgtggtcaccagacacctgttcgcatctatcgcttctcaaccagagcca
cagatcacctgtagaccaccgccacaaactgcgactgcgagcatattcgcgcctcgtacc
gaggacatgaacaaaggctttttgactttcagcgaggatcaaccaggccttacgatgctg
aaggacgagccagaggatttgacacacctggcgcctacaccgggcgacgtatgcgttccc
ctcgaagacacgcctttcctcacggacatgctcgacgaattcatcctcggcaacgataat
tactgtcccctcttgagcccctgcggtaccctcgcgcccgaactacgttctgcggatttc
ggcgatccgctgaaggataccgaattggtggagtccacgaggaataagagcctgggtgaa
tccttggccgatagcgatccgttcatgtacggcgattcgccgagcagtccttgtagcatc
gatccaagcactgtttcgccgccactcaccaaataccgtcaaagcccggaacagagcata
gattctttgggcagccctacatgcggtagcggtgccgagggaatgtcggaggacgagatg
ttaatgttaggtttgaacgacagcatagccgacgacgaaatggcactaagggcaccttac
atcccgatgtcagatcaagacgaagcgctcgacttgttgatcagtaatgacatggtgatg
tggagcccgccacagacgacggatcagaagaattgtttaaaatggatggtaacagagaag
gaacagaggacatcggactccagtttggcgcaactcttgaagacggaccaagttgtttcc
agaaagtacaacgatcacggtgggggcttagtaaatccggttcaagttcttggtcaaata
cctcgaagaaacacaaatttagataactgccagtggtcttccaaggtggacagaccaacg
aaacgcattcacactgcctcgatcgacacgggaaatgacaataagcgcatcaagtgcgag
gagtccgcgaaacacagtagcctggaagatcagttgctgagcaagcagccttcctccagg
aagtcgtcgacccttggtagcagccaactgctacgtcggttggtctcccagcagaacgtc
ctcaggaacaattttgcgaacgaatcgttcgacggttcaacagtgaacggtcggcaaagc
gatgatcgcatgcaattggagttgaacgacggcgagggggacagtggcggtggtgacgag
gatggagggtgtcgtcgaaacggggagagcgtcgacggcaagccgagttcgcaacggaac
tcggcgtgcaacagcgtgctaatgaatctcctcgtgtccggctgcgacgagaagctgacg
gactcgagaagcgtaccttcgatctaccccaagagtttggctacgccgttgatcgtgaac
ctggaggatcaccaaatggtgccgcaatgctcggattcgagtggatcgagctcgcctttc
gatcaactgagcccgatcgcgaggaaggaactaagtaacgcgttcatcggtcaatcgatc
gtttcgccagcctcgccaattgcctcgttcgatggtttcgatgactacgagccgagcatg
accgcgagcggtttgctacaagtcgagccggaccttttcggaagtctgttggatcggagt
ctcgcttaa
DBGET
integrated database retrieval system
