Ceratina calcarata (carpenter bee): 108624757
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Entry
108624757 CDS
T06061
Name
(RefSeq) DNA polymerase delta catalytic subunit isoform X1
KO
K02327
DNA polymerase delta subunit 1 [EC:
2.7.7.7
]
Organism
ccal
Ceratina calcarata (carpenter bee)
Pathway
ccal03030
DNA replication
ccal03410
Base excision repair
ccal03420
Nucleotide excision repair
ccal03430
Mismatch repair
ccal03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ccal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
108624757
03410 Base excision repair
108624757
03420 Nucleotide excision repair
108624757
03430 Mismatch repair
108624757
03440 Homologous recombination
108624757
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ccal03032
]
108624757
03400 DNA repair and recombination proteins [BR:
ccal03400
]
108624757
Enzymes [BR:
ccal01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
108624757
DNA replication proteins [BR:
ccal03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
108624757
DNA repair and recombination proteins [BR:
ccal03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
108624757
MMR (mismatch excision repair)
DNA polymerase delta complex
108624757
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_B
DNA_pol_B_exo1
zf-C4pol
divDNApol
DNA_pol_B_2
Motif
Other DBs
NCBI-GeneID:
108624757
NCBI-ProteinID:
XP_017879759
LinkDB
All DBs
Position
Unknown
AA seq
1042 aa
AA seq
DB search
MQLMAPEQENTSAKWSRPPPPQLNPQTDVLVFQQIDIDHYLDAPLPGMPGSKTAPVPIMR
MFGVTEQGNSVCCHVHGFTPYLYVSAPQNFNEHHCRQFKDALDKALLKDMRSNPDNIQET
VLAVERVYKQNMYGYAGNEKSLFLKITVAVPKLVAPCKRLVEADNIIPEFNHKYIAYESN
IDFDIRFMVDTSVVGCSWIELPPKTWKLRQHYGHDLPLITRCQLEVDVAWDAFIAHEPHG
EWSKIAPFRILSFDIECAGRKGIFPEPNHDPVIQIANMVIRQGEPEPFLRNIFTLDTCAP
IVGSQVLSFDKEQVMLEKWAEFVRQLDPDIFTGYNINNFDFPYLINRAKHFNLTNFYFLG
RVKKVKSVIKTQVLQSKQMGNRENKHVNFEGRVPFDLLLVLVRDYKLRSYTLNAVSYHFL
QEQKEDVHHSIITDLQNGNAQTRRRLAVYCLKDAYLPLRLLDKLMCIFIYMEMARVTGVS
LCSLLTRGQQIKVVSQLLRKIREKDFLMPVHRGQATDEQFEGATVIEPKRGYYNDPIATL
DFSSLYPSIIMAHNLCYTTLLNSERQTKYKVNSEDVTVTPTDSRFIKANVRKGILPEILE
NLLSARKAAKAELKNETDPLKQKVLDGRQYALKVSANSVYGFTGAQMGKLPCLEISASVT
SYGRTMIEKTKQEVEQQFCVTNGYNNDAVVIYGDTDSVMVKFGVKTVEEAMSLGREAAEF
VSSKFLKPIKLEFEKVYFPYLLINKKRYAGLYFTRPDKYDKMDCKGLETVRRDNCPLVAN
MMNTCLQKLLIDRNPNDALNYAKQMISDLLCNRVDISQLVITKELTKTDYHAKQAHVELA
AKMKKRDAGNAPKLGDRVPYVLISAAKGTPAYQKAEDPIYVLENNIPIDTQYYLENQLAK
PLVRIFEPILGDKAESLLLKGDHTRTRSRVTSKVGALSAFTLKKAACLGCKAVLTPEREK
MALCQYCEPKEAEFYQTELYMGRKLEEKFCRLWTECQRCQGSLHQEVLCTSRDCPIFYMR
KKVQMELDTQMKRVERFGIPEW
NT seq
3129 nt
NT seq
+upstream
nt +downstream
nt
atgcagctcatggctccggagcaagaaaacacatctgctaaatggagcaggcctcctcct
cctcaattaaacccacaaacagatgtattggtctttcagcaaatagatatcgaccattac
ttggatgcacctttacctggcatgccaggcagtaaaacagctccagtaccaataatgaga
atgtttggtgtcacagaacaaggaaattctgtttgttgtcatgttcatggtttcactcca
tacctgtatgtctcagctccacaaaacttcaatgaacatcattgtaggcagtttaaggat
gctttagataaggctctgttaaaagatatgagatcaaatccagataatattcaagaaact
gttttggctgttgaacgggtgtataaacagaacatgtatggctatgcaggaaatgagaaa
tcattattcttaaaaataacagtggcagtaccaaaattagtcgcaccttgcaaaagactg
gtcgaggcggacaatattatacccgaatttaatcataagtatattgcttatgaaagcaac
attgattttgacattagatttatggtagacacctcagttgttggatgctcatggatcgaa
ttgcctccgaagacgtggaaacttcgtcaacactatggacatgatttaccgttaattaca
agatgccaattggaagtggatgtggcatgggatgctttcattgcacatgagccacacgga
gaatggtcgaaaatcgcaccattcagaatactcagtttcgatattgaatgcgctggccgc
aagggtatttttcccgaaccaaatcacgacccagttatacagattgctaacatggtaata
agacagggagaaccagagccttttttaagaaacatttttactctggacacgtgcgcacca
atcgttggtagccaagttttaagtttcgataaggaacaagtaatgttagagaaatgggct
gaatttgtgagacagttggaccccgacattttcactggatataacataaataattttgat
tttccctatctaattaatcgagcaaagcatttcaatttaacgaatttttactttcttggt
cgagtgaagaaagtgaagtctgtgattaaaactcaagtacttcaaagcaaacagatgggt
aatcgtgaaaataagcatgtcaattttgaaggaagagttccattcgacttattgctggta
ctggtcagggattacaaattaaggtcttataccttaaatgctgtctcctatcattttttg
caagaacaaaaagaagatgttcatcatagtattatcacagacttacaaaatggcaatgca
cagacccgacgaaggcttgctgtctattgtttaaaagatgcgtacttaccgctaaggctt
ttagacaagttaatgtgtatttttatctatatggaaatggcaagagtcactggagtttct
ttatgcagtttgttaacccggggccagcaaataaaagttgtttctcaacttttgaggaag
attcgagaaaaagattttttaatgccagtacaccggggacaagctactgacgaacaattc
gaaggtgcaacagtcatagaaccaaagcgtggctattataatgatccaattgcgactttg
gatttcagttctctatatcctagtattatcatggcccacaatctgtgttatacaacactg
ttaaatagcgagaggcagactaagtataaagttaattcagaagatgtaactgtgactcca
actgattcaaggtttatcaaagctaacgtcagaaaaggaattctaccagaaattttagaa
aatctcttatcagctagaaaagcagcgaaagctgagttgaaaaatgaaactgatccattg
aaacaaaaggtattggatggtagacagtatgctttgaaagtatctgccaattctgtatac
ggtttcactggcgctcagatgggaaaattaccatgcttagagatttctgctagtgttacc
tcgtatggacgtaccatgatagaaaaaacgaaacaggaagtggaacagcaattctgtgtt
acaaatgggtataataatgatgcagtagttatatatggagatacagattctgttatggtt
aaatttggtgtaaaaacagttgaggaagccatgagtctcggtagagaagcagcagaattt
gtatcttcaaaattcctaaagccaataaaattagaattcgagaaagtatattttccatac
ctattaattaataagaagcggtacgctggtttatactttacacggccagacaaatatgat
aaaatggactgtaaaggtttagaaactgtacgaagagataattgtccattagtagccaac
atgatgaatacttgcttgcaaaaattgctcattgatagaaaccctaatgatgctctaaat
tatgcaaagcaaatgataagcgatctcttatgtaatcgtgttgatatttctcagttagtg
attacaaaggaattaacgaagactgattaccacgccaaacaagctcacgttgaattagct
gcaaaaatgaagaaacgtgacgctggaaatgcaccgaaacttggtgacagagttccatat
gtcttaatatcagcagccaaaggcacaccagcttatcaaaaagctgaggatccaatatac
gtgttggaaaataatattcctatagacacgcaatattacttggaaaatcagttagccaag
ccattggtacgcattttcgagccaattcttggcgacaaggctgaatcgcttttgttgaag
ggagatcacacacgtacgagatctcgtgttacatcgaaagttggagctctgtccgccttc
acacttaaaaaggcggcatgtttgggctgcaaagctgttctaacaccagaaagggaaaaa
atggctttatgtcaatattgcgaaccaaaagaagcagaattttatcaaactgaattgtac
atgggtagaaaattggaagagaaattctgtagattatggacagaatgtcaaaggtgtcag
ggaagtcttcaccaagaagtattgtgtactagtcgtgattgccctatattctatatgaga
aagaaagttcaaatggaattagatacgcaaatgaaacgagttgaaagatttggcattccg
gagtggtga
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