Ceratina calcarata (carpenter bee): 108624975
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Entry
108624975 CDS
T06061
Name
(RefSeq) replication factor C subunit 1 isoform X1
KO
K10754
replication factor C subunit 1
Organism
ccal
Ceratina calcarata (carpenter bee)
Pathway
ccal03030
DNA replication
ccal03410
Base excision repair
ccal03420
Nucleotide excision repair
ccal03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ccal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
108624975
03410 Base excision repair
108624975
03420 Nucleotide excision repair
108624975
03430 Mismatch repair
108624975
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ccal03032
]
108624975
03400 DNA repair and recombination proteins [BR:
ccal03400
]
108624975
DNA replication proteins [BR:
ccal03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
108624975
DNA repair and recombination proteins [BR:
ccal03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
108624975
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC1
AAA
BRCT
Rad17
BRCT_2
AAA_22
PTCB-BRCT
AAA_14
RuvB_N
AAA_33
nSTAND3
RNA_helicase
AAA_30
AAA_16
Plant_all_beta
AAA_assoc_2
NTPase_1
AAA_19
DUF1824
AAA_5
RCF1-5-like_lid
AAA_6
AAA_17
AAA_18
Motif
Other DBs
NCBI-GeneID:
108624975
NCBI-ProteinID:
XP_017880118
UniProt:
A0AAJ7IYB5
LinkDB
All DBs
Position
Unknown
AA seq
998 aa
AA seq
DB search
MPRDIRSYFLSGKANSTSTSTKASKRRIIASDDEDEISQSPLKKSKKTLPKKVAESDSEN
VLKKKTVSPSDIFGKSPVNREEAPKVSKKLQKKESEIHNDDDFEATLTQLDTSDIEKKYL
EETRKDAHENKKKEATPVKEKRSSSKNAKHKNGSTEDVDDREDKSKKSTKKTELPNIVVE
HVEKKKASPKKPDVYEEIIEKKKQHSVMYQQYLNRGGARNPGSKEVPVGAENCLAGLSFV
LTGVLESLEREEAEELIKKYGGRVVHQVSKKVNYVIIGDQPGPAKVEKARSLNVTQISED
DLLELIKTRPAGQASSVQKPRARSTSKKRIISTDSEESSPPKKAKLDNEKRSPSQKRIIS
TDSEESSPPKKAKLDDEQKEASRTDEKNKSEKPSKASPKRKELNNEDLKTKSPIKVKHES
KKFILDRKETMNEIASVPVQALSEKYRPKTMKQILGQQGDKSNAKKLHSWLMNWHKNQTS
KTKRTKPSPYAKNDDGGFFKAALLSGPPGIGKTTTVQVVCKELGFDLVEFNASDTRSKRL
LKEEVSELLSNTSLKNYFEDNKNKPSWNHVLLMDEVDGMAGNEDRGGLQELISLIKSTDI
PIVCICNDRNNPKMRTLSNYTFDLKFAKPRLEQIRGAMKSVCFKENIQMSNEDLDRLIEA
TNQDIRQVINHLSLFVGQTGTQEKSEKKHANKDLRLGPWDVVRKVFSAEEHKHMNIHDKS
DLFFHDYNISPLFVQENYLSVVPQGVPKNALLERIAMSAESIAMGDLVERAIRSNNAWSL
LPTQACFSSVIPGTLMSGYIGGQINFPNWLGKNSRTGKFNRLIQEITQHARLTTGVSKEA
INLDYLKPLRNAIVRPLTSSGKEDISAAVDVMNRYHLLREDLDSLIEVSLWPGDRDPMQF
VDSKTKAAFTRAYNKNSAPLPYAVNATTKKRAASSQNEGEEEDALEEEANSEDDNIDADQ
MIKAKKPKESKNAEPKSKNEGRGKTSNKPAKRGRGRGK
NT seq
2997 nt
NT seq
+upstream
nt +downstream
nt
atgccgagagatattcgatcttattttctgtctggcaaagcgaattctacttcgacttcg
acgaaagcttcgaagagacgaattattgcctccgacgatgaggacgaaatatctcaatct
cctctaaaaaaatccaagaaaacgttgccgaagaaagttgccgaatctgattctgagaat
gtgttgaaaaagaaaacggtttcccccagtgatatatttggcaagagtcctgtgaacaga
gaggaggcacctaaagtatctaagaagttacaaaagaaggaaagcgagatccacaatgac
gatgatttcgaagctacgttgacgcaattagacacgtctgatatcgaaaagaaatacttg
gaagaaactcgtaaagatgcgcatgagaacaaaaagaaggaagcgactccagtcaaagag
aagaggtcatcttctaaaaatgcaaaacataaaaacggttcgaccgaagacgtcgatgat
cgtgaggacaaatcgaagaagtcgactaagaagactgaacttcctaacatagtagtcgaa
catgtagagaagaagaaagcatctccgaagaagccggatgtgtacgaagaaataattgag
aagaagaaacagcattctgtcatgtatcagcaatatctgaacagaggtggagcgaggaat
ccgggctcgaaagaggtcccggtcggggctgagaactgcctcgcgggactgagtttcgta
ttgaccggagtcttagagtcgttggaaagggaggaggcagaggagcttataaagaaatac
ggaggccgggtggtgcaccaagtgtcgaagaaggtcaactacgtgataatcggtgaccag
cctggtcccgctaaagtcgagaaagccaggagtttgaacgtgacgcaaatatcagaggac
gatttgttagagttgattaaaacgaggcctgcgggtcaggctagcagcgtacagaaacct
cgtgcgcgatcgacttcaaagaagaggatcatttccacggattcggaagaatcgtctcca
ccgaagaaagcaaaactcgacaacgaaaaacgatcgccttcacagaagaggatcatttcc
acggattcggaagaatcgtctccaccgaagaaagcaaagctcgacgacgaacagaaagaa
gcgtcgcgtaccgacgagaaaaataaatctgagaagccgtcgaaagcgtcgccaaagaga
aaagagctgaacaatgaagatctgaagacgaaatcaccgatcaaggtgaaacacgaatcg
aagaaatttatcttagatagaaaggaaacgatgaacgagattgcaagcgtccccgtgcaa
gcattgtccgagaaatacagaccgaagactatgaaacaaatcctgggccagcaaggtgac
aagagcaatgctaaaaagttgcacagctggttaatgaactggcataagaatcaaactagc
aaaacgaagcgtacgaaaccttctccgtacgcgaagaacgacgacggaggatttttcaaa
gccgcgttattgtccggtccaccgggtatcgggaagaccacgacggttcaagtcgtctgc
aaggagttaggcttcgatctcgtcgaattcaacgcgtccgataccagaagcaagaggctc
ctgaaagaagaagtgtcggaactgttgtcgaacacctcgttaaagaattatttcgaagac
aacaagaacaagccgtcttggaaccacgttctgttgatggacgaggtggacggaatggcc
ggtaacgaggatcgcggtggtctgcaagagttgatcagtttgatcaagtccaccgacata
cccatcgtctgcatctgcaacgacagaaacaatccaaagatgaggacactcagtaattac
acgttcgacttgaaattcgcgaagcctagactggaacaaatcaggggagcgatgaagtcc
gtgtgcttcaaagagaacattcaaatgtcgaacgaagatctcgatcgcctgatcgaggcg
acgaatcaagatatccgacaagtcataaatcatctgtcgttgttcgtaggtcagaccggc
actcaggagaagtctgagaagaagcacgctaacaaagatctgaggctgggcccatgggac
gtcgtgaggaaagtgttctccgccgaggagcacaaacacatgaacattcacgacaagagc
gatctgttcttccacgattacaacatctcaccgttgttcgtgcaagagaactatttgtcc
gtggttcctcaaggcgtaccgaaaaacgcactactggagagaatagcgatgagcgccgag
agcatagcgatgggagatctggtcgagagggctataaggagtaacaacgcctggtccctt
ctaccgacgcaagcttgtttctcatctgtgatacccggcacgttgatgtctggttacatc
ggcggccagatcaacttcccgaattggctcggtaagaattcgcgaaccggtaaatttaat
agactgatacaagaaatcacgcagcatgcacgtttgactaccggcgtcagcaaagaagcg
ataaacttggactacctcaagccccttcgaaacgccatcgtcaggcctttgacgtccagc
ggcaaggaagatataagcgcggcggtcgacgttatgaatcgttaccatttactcagggaa
gatttagactctttgatagaggtatccttgtggccgggcgatcgcgatccgatgcagttc
gtagacagcaagacgaaggcagcgttcacgagggcgtataataaaaattcggcaccgttg
ccgtacgcggtgaacgctactaccaagaagagagcggccagctcgcagaacgagggagag
gaagaagatgctctcgaggaggaagcgaattccgaagacgataacatcgatgcggatcag
atgatcaaagcgaagaaaccgaaagagagcaagaacgcggaaccgaagagtaagaacgaa
gggagaggcaagaccagtaataaaccggcgaaacgtggacgtggaagagggaaatga
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integrated database retrieval system
