Ceratina calcarata (carpenter bee): 108625031
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Entry
108625031 CDS
T06061
Name
(RefSeq) probable helicase with zinc finger domain isoform X1
KO
K25168
helicase with zinc finger domain [EC:5.6.2.-]
Organism
ccal
Ceratina calcarata (carpenter bee)
Brite
KEGG Orthology (KO) [BR:
ccal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccal03019
]
108625031
Messenger RNA biogenesis [BR:
ccal03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
Other 5'-3' decay factors
108625031
3'-5' decay
Other 3'-5' decay factors
108625031
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_12
AAA_11
AAA_19
AAA_30
ResIII
UvrD-helicase
AAA_22
PhoH
Mg_chelatase
Terminase_6N
DUF2688
AAA_7
AAA_5
PAM2
Motif
Other DBs
NCBI-GeneID:
108625031
NCBI-ProteinID:
XP_017880214
UniProt:
A0AAJ7N6K8
LinkDB
All DBs
Position
Unknown
AA seq
909 aa
AA seq
DB search
MVDRPFRTNGEVKPPFSFAEKVHRDWIKSESPEKIVRYGQTEDVCIFWRKSPLCRLTTDN
ASYNWNFWIVTRGKQLQRVALTLDQNRRNFALKSVIYDSKEIGVTNGQEWYNSELETVDA
NGNGKEQSHYFIDVHFAANRYGTYRQRMLLYFGDYPVLLQNVCVDCLPIEDLTRIEEATD
YQFTQNPNAWNDGINRIQWFESPFVAAKDPKEERLSMIYLYPNKHNFFLTQETLTDERLT
AENYRGRLHELINVEELARHEQIARYNETSYMRLLNHYVLTLPGDASTIAKYAPPGELFA
QLPLSRGISEDTKSGRLFLRGCNKVLFKSKCPQHVKASKAIFEAHIEDKCTHTVYVRLSK
ECVQTLNVTADSDLHVQVQFLLNRLPYCEWHKAVDSLPDIGLVFLGKDHVNMNDRQGFAQ
LLERNASNVRVPLLNDEQKKAVAVITASVDVPMPPILLLGPFGTGKTFTIAQALRLLLTG
DSEHKILLCTHSNSAADLYVKEFFDVWYKAEKNPRLKPVRIYYKGRARNTVHPVVQEYSL
MRDNGTFRDPTDEDLNDCGLVVTTLATSSSLTSLNLSFTHIVIDEAAQALECEVLIPLAL
ATPRTRLVLAGDQMQLAPEIYSDLAYERGLGISLLERIYGMYPAAHPCRIHLDQNYRAHD
DIVRFTSEAFYEGLVEPAGKNLLRHPVLKPLTFYAVQGVEIQDSTGYANMNEVYELVTRV
QELRNSWPTDRWGAYGEKSIGVLAYYAEQVQRIRAELREHRLADVSVERVLNVQGKQFTA
IFISTVRTGQCCRYSAERNVNDYGFLTNPRLLNTALTRAKCMVAVVGDPIALSTIGSCRK
LWQRYLEVADLRNVDRNTLQNQLTQIPELPSVAPLNPLAREFVPRRYVPMVEYVPVPVMY
PVFHPFYST
NT seq
2730 nt
NT seq
+upstream
nt +downstream
nt
atggtcgatcgcccgttccgtacgaacggcgaggttaaacctcctttcagcttcgccgag
aaggtgcaccgcgactggatcaagtcggagagcccggaaaagatcgtcagatacggacag
accgaagacgtatgcattttctggagaaagagcccgctgtgcaggctgaccacagataac
gcatcttacaattggaacttttggatagtgacgcgcggtaaacagttgcaaagagtagcg
ctgacgctggatcagaaccgaaggaactttgcgttgaaatcagtgatttacgatagcaag
gagatcggtgtgacgaacggtcaggaatggtataactcagaattggaaaccgtagatgcg
aacgggaacgggaaggaacagtcgcattactttatcgatgttcactttgctgccaataga
tatggcacataccggcaaagaatgctcctttacttcggcgactatcccgtgttgctacaa
aacgtctgcgtggactgtctgcctatcgaagatttaaccagaatcgaggaggctaccgat
taccaatttacacagaacccgaacgcgtggaacgacgggatcaatcgtatacaatggttc
gaatcgccgttcgttgccgcgaaagatccaaaggaagagagactgtccatgatctatttg
tatcctaacaaacacaacttcttcttgactcaagaaacccttacggacgaacgtctaacg
gcagaaaattacagaggccgtctacacgaattgatcaacgtcgaagagctagctaggcac
gagcagatcgccagatacaatgagacctcgtacatgcgtcttctcaatcattacgttctc
acgttgcccggcgacgcttccaccatcgccaaatacgcgccgcccggcgagctcttcgct
cagctgccactcagccgcggtatctccgaggataccaagagcggccggctgttcttgcga
ggctgcaacaaagtgctcttcaagagcaagtgcccgcagcacgtgaaagcctcgaaggcg
atattcgaggcgcacatagaggacaagtgcacgcacaccgtgtacgtcaggctgtcgaag
gagtgcgtgcagacgttgaacgtgacggccgactccgacctgcacgttcaggtccagttc
ttgttgaaccgtttgccttactgcgagtggcacaaggccgtcgacagcttgccggacatc
ggtctcgtgttcctcgggaaagatcacgtgaacatgaacgaccgtcagggtttcgcgcag
ttgctggagaggaacgcgagcaacgtccgcgtcccgttgttgaacgacgagcagaagaag
gccgtggcagtgatcacggcctccgtagacgtcccgatgccaccgattctcctgttaggc
ccgttcggaacggggaaaacgtttaccatcgcccaagcgctaagactgttgctcaccggc
gattccgagcacaagattttgctgtgcactcacagcaacagcgcggccgatctctacgta
aaagagttcttcgacgtctggtacaaggccgagaagaatccaagactgaagcccgttaga
atttattacaagggaagagccaggaacacggtacacccggtggttcaggagtatagtttg
atgagagataacggtacgtttcgcgatccgaccgacgaagatctgaacgactgcggattg
gtcgtgaccacgttggccacctccagttctctgaccagtctgaacctctcgttcacgcac
atagtgatcgacgaggctgctcaggcgctggaatgcgaggtcctgatacctctggcactg
gccacgccgaggacgaggctcgtcctcgccggagaccagatgcaattagcgccagagatc
tatagcgatctagcctacgagagaggactgggcatcagtctgttagagaggatctacgga
atgtatcccgccgcgcatccttgtagaattcacctggaccagaattatcgagcccacgac
gacatcgttcggttcacctccgaggcgttctacgaaggactcgtggaaccagccgggaaa
aacttgctcaggcatcctgtcctgaaaccgctcactttctacgccgttcaaggagtcgaa
attcaggactcgacagggtacgcgaacatgaacgaggtctacgagctggtgactcgagtg
caagagctgaggaacagctggccgacggatcgctggggcgcctacggggagaaatcgatc
ggcgtgctagcgtattacgcggagcaagtacagaggatccgcgccgagctcagggaacac
agactggcggacgtgtccgtggagagggtgctcaacgtccaggggaaacagttcaccgcg
attttcatcagcaccgtaaggaccgggcaatgctgccgttactccgccgagaggaacgtc
aacgactacggtttcctaacgaatcccaggctactaaacacggccctgacccgcgccaag
tgtatggtggccgtcgtcggagacccgatcgcgttgtccaccatcggttcctgtaggaaa
ctctggcagagatacttagaagtcgccgatctgcgcaacgtcgaccggaacacgttgcag
aaccagttgactcaaattcccgaactcccctcggtcgctcctctgaacccgctcgccaga
gaattcgttcctcgaaggtacgtaccgatggtcgaatacgtacccgttcccgtcatgtat
cccgtgttccatccgttctactcgacgtag
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