Ceratina calcarata (carpenter bee): 108625231
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Entry
108625231 CDS
T06061
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1 isoform X1
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
ccal
Ceratina calcarata (carpenter bee)
Brite
KEGG Orthology (KO) [BR:
ccal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccal03021
]
108625231
03036 Chromosome and associated proteins [BR:
ccal03036
]
108625231
Transcription machinery [BR:
ccal03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
108625231
Chromosome and associated proteins [BR:
ccal03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
108625231
SLIK complex
108625231
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
CDH1_2_SANT_HL1
HTH_Hrp3
CHD1-like_C
Helicase_C
Chromo
ResIII
HDA2-3
DEAD
Myb_DNA-binding
Motif
Other DBs
NCBI-GeneID:
108625231
NCBI-ProteinID:
XP_017880546
UniProt:
A0AAJ7IYR8
LinkDB
All DBs
Position
Unknown
AA seq
1790 aa
AA seq
DB search
MQKTLESESGKESGSDSENESKSDSSTSGSLTGSGSGSESDSSSSSGSGSGSGSDSDKSE
KSDAPARSDSFQSKSSYHSTEKVRLKNESSREWDENPDIYGIRRSGRSRKEPERLATQRE
SDSDSRKKFKKKGSHNSWNSDSSDSESDDGDSRRPPPSKSLNRRAAQKAKDNVRARKKHI
SESSENSSFDSDDNRRQASRRAGTAISYKEQSEERTDSEDLVEVEEGSIATAEPDNAETI
ERILGQRCGKKGVTGNVTTVYAVEENGDPNPADLSNEETEMQYLIKWKGWSHIHNTWESE
ESLKAQKVKGIKKLENFIKREREIKQWRDYAGPEDIDYFECQLELQQDLLKSYNNVERII
AEYNKPDSDRPDYYCKWESLPYAEATWEDGILIVKKWPEKIKEFREREESKRTPSKHCKV
LRSRPKFHQVKGQPEYMGRGKDLILRDYQMDGLNWMIHSWCKENSVILADEMGLGKTIQT
ICFLYYLFHTHQLHGPFLLVVPLSTMTSWQREMSQWAPDINFVTYLGDVTSRNVIREYEW
CYSSKRLKFNAILTTYEIVLKDKAFLGALNWAVLLVDEAHRLKNDDSLLYKALAEFHTNH
RLLITGTPLQNSLKELWALLHFIMPAKFSSWEEFEKEHDNAAQKGYSKLHKQLEPFILRR
VKKDVEKSLPAKVEQILRVEMTSLQKQYYKWILTKNYNALRKGVKGSTMTFLNIVIELKK
CCNHAFLTKPTENETRESNEDYLQQIIRGSGKLVLLDKLLVRLRETGHRVLIFSQMVRML
DILGEYLQKRHFPFQRLDGSIKGELRKQALDHFNAEGSQDFCFLLSTRAGGLGINLATAD
TVIIFDSDWNPQNDLQAQARAHRIGQKNQVNIYRLVTKNSVEEEIVERAKQKMVLDHLVI
QRMDTTGRTVLDKKNAGTNSNPFNKEDLNAILKFGAEDLFKDEEDGDEEPTCDIDEILRR
AETRDEGPSTVGDELLSAFKVASFAAFEEESEPVSQPNDNDDESKDWAEIIPENFRKKVE
EEEKSKEMEDLYLPPRSRKTLQQINQSEGRGRKRKKLSADDSEEGEDSGSEAEGTDDERP
KKRGRPRVTPRENIKSFTDAEIRRFVKSYKKFPAPLKRLDDIAADAELQEKPMSELRFLG
DQLRTRCDACLSEFESTAKENKGEEDGKGPGRKRGRGPTFKIGGVMVNAKSFSAAVKELE
PLEQALPSDSEQRSNWHVDMKLKPANLDCDWNSEDDSRLLRGIYQHGMGSWEAIKMDNSL
KLGDKLLPNGSKLQIKKIHARAEYLLKVLKKQIDSKLGVTKVRKPRKPKEAKAAITKEII
EENDTSGEENGKSRTKVEKPAVKKEEEVVIKKEIKEEVEDVVEEKKKEKKTKKEKKENKK
AKKAKQPAGPMHFTANNEPRALDVLGDLDPSIFNECKEKMRPVKKALKALDRPDQSLSEA
EQVAHTRQCLVQIGNQINTCLEEYRDPEQIKEWRSNLWYFVSKFTEFDAKKLYKLYKHAT
KKGGESNTSATSSPEKKEEASCGKKHTEKHIDKPVESIKQKRKIDDMEENSNSSTTASKK
HFSAVSAVSSISNTSAVTIGAITITPITSTPNSTSSTTNSVDTPRHKEKESKHKDMKRDR
DRDRDRDRPHSDRSMDRMSGSKDERIRRDSGGYSIGGHYSGSREDDHWLSRDGRDMRDGR
FGDHKRDRFDSYGRMSSGYHRDRERERDRSIHMNDKRSDYYRYPSGPPGYGYGPGGYGGG
GGGGYPPSDIAPSHFRGRGYPGDSYPNDWRPNKDYRRDYDRRPPPPNANS
NT seq
5373 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaaacgttagagtctgagtctggtaaagaatctggatctgattctgagaatgaa
agtaagagtgatagctctacttcaggaagtcttacaggatctggttcaggatcagaaagt
gactctagctcatcaagcggttccgggtccggatcaggctctgattctgataaatcagag
aagtcagacgcacctgcacgaagtgatagcttccagagcaaaagttcatatcacagcaca
gaaaaagttaggcttaaaaatgagtctagtcgcgagtgggatgagaatcctgatatttac
ggaatcaggagatccggacgttctaggaaagagcccgaaaggctcgctacgcagcgtgaa
agcgatagcgatagccgcaagaaatttaagaaaaagggttcgcataattcatggaactct
gacagttcagattcagaatctgatgatggtgacagtaggaggcctccacctagtaaatcg
ttaaatagacgtgccgctcagaaggctaaagataatgtcagggcacggaagaaacatatt
tccgaatcgtctgagaattcatcttttgatagcgatgataataggaggcaagcttcgaga
agagctggtactgctattagttacaaagaacaaagcgaagagagaacggacagtgaagat
ctcgtcgaagtcgaagagggtagcattgcaactgcagaaccggacaatgcggaaacaatt
gaacgaattttgggacaaagatgtgggaaaaaaggagttacaggaaatgttaccacggtt
tatgctgtcgaagagaatggagatccaaatccagcggatttgtctaatgaggaaactgaa
atgcaatacttgataaaatggaaaggatggtctcatatacataatacatgggaatcggaa
gaatccttgaaagcacaaaaagtgaagggaataaaaaagttagagaattttattaaacga
gaacgagaaatcaaacagtggagagattacgcaggaccagaggatatagattattttgaa
tgtcaattggaacttcaacaagatctactaaaaagttacaataatgttgaaagaatcatt
gctgagtataataaacctgattcagatcgtccagattattactgcaaatgggaaagctta
ccatacgctgaggctacatgggaagatggaattttgattgtaaaaaaatggccagagaaa
atcaaagaattccgtgaaagagaagagtcgaaaagaacgcctagcaaacattgtaaggtt
cttagatcaagaccaaagtttcatcaagtaaaaggacagccggaatatatggggagagga
aaagatttgattctcagagactatcaaatggatggattaaattggatgattcattcttgg
tgcaaagagaacagtgttattttagcagacgaaatgggtcttggtaaaactatacaaaca
atatgcttcctttattacttattccacacgcaccagcttcacgggccattcttattagta
gtccctctttcgacaatgacttcctggcaaagagaaatgtcacagtgggcaccagacata
aatttcgttacatacttgggtgacgttacttcccgtaatgttatcagagaatatgaatgg
tgttacagctcgaagagactaaaatttaatgctattctcacgacatatgaaatagtactt
aaagacaaagcatttttgggtgccttaaattgggccgtgttgctagtggacgaagcgcat
cggttaaagaacgatgattctttattgtacaaagcactcgctgaatttcacacaaatcac
cgccttttaataactggtactccattgcaaaatagcttgaaagaattgtgggccttacta
catttcataatgcctgctaaatttagttcttgggaagaatttgagaaggaacacgataac
gcggcacaaaaaggatattccaaattacacaaacagctggagccatttattttacgacgc
gttaagaaggatgtggagaaatcgttacccgcaaaagttgaacagattttgcgagtagaa
atgacatctctgcaaaaacaatattacaaatggatattgaccaaaaattacaatgcatta
cggaaaggtgtcaaaggttcaactatgaccttccttaatattgtaattgaattaaagaaa
tgctgtaatcacgcatttcttacgaaacccaccgaaaatgaaacaagggaaagtaatgaa
gattacttgcagcaaataattcggggttctggaaaattagttctccttgataaattgttg
gtgagactgcgtgaaacaggtcatagggtgttgatatttagtcaaatggtcagaatgtta
gatattcttggcgaatatctgcaaaagagacattttccattccaaagattagacggaagt
ataaaaggagaactgcgaaagcaagcactggatcattttaatgcagaagggtcgcaagat
ttttgcttcctattatcgactagagcaggtggtcttggtattaatctcgccaccgctgac
acagtcattatattcgattcggattggaatccacaaaatgatttgcaagcacaagctaga
gcacatcgcattggacaaaagaatcaggtgaatatttaccgattggtaacgaaaaattct
gtcgaagaagagatagtagaaagggctaaacaaaaaatggttctggatcatctcgtgatt
caacggatggatacaactggtcgaacagtgttggataagaaaaatgcagggaccaatagc
aatccatttaacaaagaggacttgaacgctattttaaaattcggtgctgaagatttattt
aaagatgaagaagacggcgatgaagaaccgacttgtgatattgatgagatactgaggaga
gcagaaacgagagatgagggaccttcaacggtaggcgacgaattattgtctgcattcaaa
gtagctagttttgctgcattcgaagaagaatccgaacccgttagtcaacctaacgataat
gacgatgaaagtaaagattgggccgaaattatcccagagaacttcagaaagaaagttgaa
gaggaagaaaaatctaaagaaatggaagatctgtatttaccgccgagaagtcgaaaaaca
ttacaacagattaaccaaagtgaaggaagagggagaaaacgaaagaaattatcagctgat
gatagcgaagaaggcgaggattctggaagcgaggctgagggaaccgatgacgaacgtcct
aagaagagaggtagaccaagggttacacctcgagaaaatataaaaagtttcactgatgca
gaaatacgaagatttgttaaaagctacaaaaaattccctgcacctctgaaacggttagac
gacattgcggcagatgcagaactgcaagagaaaccaatgtcagagttacgtttcttagga
gatcaattaagaaccagatgcgacgcttgcttatcggagttcgaaagtacggcaaaagaa
aataaaggtgaagaagacggtaaaggacctggccgtaaaagaggcagaggccccacattt
aaaatcggtggcgttatggtcaatgcgaaatcgttctcagctgcggtgaaagaattagaa
ccattagaacaggctttgccgtcggattcggaacaacgatctaattggcacgttgacatg
aaattgaagccggcgaatttggattgtgattggaattctgaagatgactccagacttctc
agaggtatatatcaacacggcatgggttcatgggaggccataaaaatggataacagttta
aagcttggcgataagctgctaccaaatggtagtaaacttcagataaaaaagatacatgca
cgcgccgagtacctcttgaaagtactcaagaaacaaattgattctaaactaggcgtgact
aaagttagaaaaccgagaaaaccgaaggaagcaaaagcagctatcacaaaagagattata
gaggaaaacgatacttccggcgaagaaaatggcaaatcgagaactaaagttgaaaagcct
gcagtaaaaaaagaggaggaagttgttataaaaaaagaaattaaagaagaagtagaagat
gtagtggaagaaaagaagaaagagaagaaaactaaaaaggagaagaaggaaaataagaag
gctaaaaaggcaaagcaaccggcaggtcctatgcattttactgctaataatgaaccaaga
gctctggatgttctcggagatctggatccatcgatattcaatgagtgtaaagaaaaaatg
aggccagtgaaaaaagcactgaaagctttagatagacctgatcaatctttgagcgaagcc
gaacaagtcgcccatacaagacagtgtcttgtacaaattggaaaccaaattaatacctgt
ttagaggaatacagagatcccgaacagattaaggaatggagaagtaatttatggtacttc
gtgtctaaatttacggaattcgatgcgaagaaactttacaagttatacaaacacgcaacg
aagaaaggaggtgagagtaacaccagtgctacgtctagcccggagaagaaagaagaagca
agctgtgggaagaagcacaccgagaaacatatcgataaaccagtcgaaagtattaaacaa
aaacgtaaaattgatgacatggaagagaattcaaatagtagtactacagcgagtaagaaa
catttctcggctgtgtcagcagtaagcagtatcagtaacacatcggcggttactattggt
gctatcacgattaccccaattacctcgactccgaattctacttcaagtaccacgaacagt
gtggatacaccgcgacacaaagagaaggaatcaaaacataaagacatgaaaagagataga
gatcgcgacagggacagggataggccccatagtgatagaagtatggacagaatgagcggg
agcaaagacgaaagaattagaagagacagcggcggttacagtataggtggacattatagt
ggaagcagagaggacgatcactggttgtcccgtgacggaagagacatgagagatggaaga
tttggggatcataaacgtgaccgtttcgactcgtacggtcgaatgtccagcggatatcac
cgtgacagagagagggaacgcgatcgtagcattcatatgaatgataaacgaagcgattat
tacagatatccatcgggaccccctggatatggatatggtccaggaggatatggaggtgga
ggcggcggtggttaccctccgtctgatatcgcgccaagccattttagaggtcgtggttat
cctggagatagttatcccaatgactggcggccgaacaaagattatagacgggattatgac
agaaggccacccccgccaaacgctaactcctag
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integrated database retrieval system
