KEGG   Ceratina calcarata (carpenter bee): 108625269
Entry
108625269         CDS       T06061                                 
Name
(RefSeq) DNA ligase 1 isoform X1
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
ccal  Ceratina calcarata (carpenter bee)
Pathway
ccal03030  DNA replication
ccal03410  Base excision repair
ccal03420  Nucleotide excision repair
ccal03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:ccal00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    108625269
   03410 Base excision repair
    108625269
   03420 Nucleotide excision repair
    108625269
   03430 Mismatch repair
    108625269
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ccal03032]
    108625269
   03400 DNA repair and recombination proteins [BR:ccal03400]
    108625269
Enzymes [BR:ccal01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     108625269
    6.5.1.6  DNA ligase (ATP or NAD+)
     108625269
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     108625269
DNA replication proteins [BR:ccal03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    108625269
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     108625269
DNA repair and recombination proteins [BR:ccal03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     108625269
   NER (nucleotide excision repair)
    Other NER factors
     108625269
   MMR (mismatch excision repair)
    Other MMR factors
     108625269
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C mRNA_cap_enzyme
Other DBs
NCBI-GeneID: 108625269
NCBI-ProteinID: XP_017880615
UniProt: A0AAJ7N6V7
LinkDB
Position
Unknown
AA seq 981 aa
MIMFSRIAFYARLTVLDKKLPCTVLVNVSPLNIISFPTINNVLNWIHITSNVKEDRDSPP
SSKRKRDDSEDSSETGSSPANKKLESPSKSKKSLKTPSPQKKVNGTPKIKITPTKTIKDT
EKRRAKTPLTASKKKQKITDVEDTPKKVSTERKRKLDEEEQKENSADSAEHKAESDAEVK
SEETSPDESINKKEIKPKRRTRQRRRISSSDVDEKEKTPPSKKQKTPHSKTEKSPSNKKE
KTSPRREEESNEEDLKEDEEENKREEKKVDDKKQNKKEEKEVDDEKENKETEESVDNSPK
KMHSFFSPKQKGNVKNNSGDKKKSDSHSYNPSASKYDPIKDACWKQGEKVPYVALTRTLE
LIENTSARLKIVEILSNYFRSVIVLSPNDLLPSVYLCLNQLAPAYEGIELGIAETYLMKA
IAQCTGRTLAQIKVDVQEVGDLGIVAEGSRSNQRTMFQPAPLTVSNVYTRLKEIGQMTGS
ASMTKKLDKIQSLFVACRFTEARYLIRSLAGKLRIGLAEQSVLQAMALACTMTPPNQEFP
PEMLNVSKSLSSDAFKQKYDETALIIKTTYCECPNYDKIIPVLLKEGVDELPKKCKITPG
IPMKPMLAHPTKGVQEVLTRFDGLKFTCEWKYDGERAQIHLSKDGDISIYSRNQENNTTK
YPDVINRFKNTRSDKVESCILDCEAVAWDNEKKQILPFQVLSTRKRKDANEADIKVQVCV
FMFDLLYLNGEPLVQQPFIKRRELLRENFKQVEGEWKFATNLDTTTMEQVQDFLDESVKG
NCEGLMVKTLEQEATYEIAKRSRNWLKLKKDYLDGVGDTIDAVVIGGYLGKGKRTGTYGG
FLLACYDQENEEYQSICKIGTGFSEEDLQKHTEFFKEHIIPQTKSYYRYDSSLQPDHWFE
PVQVWEIKCADLSLSPVHKAAVGIVDPEKGISLRFPRFIRIRDDKNSEEATSAQQVANLY
NSQEQIKNQSTSTKVTEEDFY
NT seq 2946 nt   +upstreamnt  +downstreamnt
atgattatgtttagtcgtatcgccttttatgcgagattaactgtactcgataagaaattg
ccgtgtacagttctcgtaaatgtatcaccattgaacataatttcatttccgacaataaat
aatgttcttaattggatacacattactagcaatgttaaggaagatagagacagtccgcca
agttctaaaaggaaaagagatgatagcgaagatagcagtgaaactgggagttctccagct
aataaaaaattggagagtccttcaaaatctaagaagtcattgaaaactccgtcaccacag
aagaaagtaaatggaacaccaaaaataaaaattactcctacgaaaacaattaaagacact
gagaaaaggagagctaagactccgcttactgcttcgaagaagaagcagaaaatcaccgat
gtagaagatactcccaaaaaggtcagtacagaacgaaaaaggaaattagatgaggaagag
caaaaagaaaatagcgcagacagcgcagaacataaagcagaatcagatgcagaagtaaaa
tctgaggagacttcacccgatgaatctattaacaaaaaggaaataaagcctaagaggaga
actagacagaggaggagaatatcatcatcagatgtcgatgagaaagaaaaaactccaccc
agtaagaaacaaaaaactccacacagtaaaactgaaaaatctccgtccaataagaaagaa
aaaacttcacctagaagggaagaagagtctaatgaggaagacttaaaagaagatgaggaa
gaaaataagagagaggaaaaaaaggtagatgacaagaaacaaaataagaaagaggaaaaa
gaagtagatgatgagaaagaaaataaggaaacggaagaaagtgtagataattctcctaag
aagatgcacagttttttctctccgaagcagaaaggcaatgtaaagaataatagcggagat
aagaaaaagtccgatagtcattcgtacaatcccagtgcctcaaagtacgatccgattaaa
gacgcttgctggaaacagggtgaaaaagtgccatacgttgcgttaacacgcacattagaa
ctgatcgagaacacaagcgctcgattgaaaatagtagaaattttgtcaaattactttcgg
tcagttatcgttctaagtccaaatgatttattaccaagcgtatacctgtgtctcaatcaa
ctcgcgcctgcttacgaagggattgaattgggtatagccgaaacgtatctcatgaaagcc
atagcacagtgtaccggtagaactttagcgcaaattaaagtggacgtacaggaggttggt
gatttgggtattgtagcagaagggagtcgttccaatcagagaacaatgtttcaacccgcg
ccgttaacagtatcgaacgtatatactagactgaaagaaataggtcaaatgaccggttct
gcgtcaatgaccaagaagctggataaaattcaatcactttttgtagcatgtcgttttact
gaagctaggtatctgattcgctcgttggctggcaaacttcgaatcggtctagcggaacag
tctgtattgcaagctatggcattagcgtgcacgatgactccaccaaatcaggagtttccg
ccagaaatgttgaatgtgagcaaatcactttcaagcgatgcgttcaaacagaaatacgat
gagactgctcttatcattaaaacgacatactgcgagtgtccaaattatgataaaataatt
cctgttttacttaaagaaggagttgatgagttaccgaaaaaatgtaaaattacacctgga
atacctatgaaacctatgttagcgcatcctactaaaggtgtacaagaggtattaacgcgt
ttcgacggattgaagttcacatgcgagtggaaatacgacggggaaagagcgcagattcat
ctttccaaggatggagatattagtatttacagtaggaatcaagagaataacactactaaa
tatccggatgttataaaccgatttaaaaatacccgtagtgacaaggttgaaagctgtatc
ctagactgtgaagcagttgcttgggataacgagaaaaaacaaattctacctttccaagta
cttagtacgagaaaacggaaggatgcaaatgaagcagatattaaagtccaagtatgcgtg
ttcatgtttgatcttctgtatttgaacggagagccgcttgtgcaacaacctttcataaaa
cgtcgtgaattgctaagagaaaatttcaagcaagtagaaggagaatggaagtttgccaca
aatttggacacgacgacaatggaacaagtgcaagactttttagatgaatcggtcaagggt
aattgcgagggacttatggtgaagactttggaacaagaggcaacatacgagattgcaaag
cgttcgcgaaactggttaaaattaaagaaagattatttggacggtgtgggtgatacgata
gatgcagttgtcattggtggttatctaggaaaagggaaaaggaccggaacttatggagga
tttctgttggcttgttacgatcaagagaatgaagaatatcaaagtatttgcaaaatcggt
acaggattcagcgaagaagatcttcagaagcatactgaattctttaaggaacacataata
ccgcaaactaaatcttactatcgttacgactcgtctctccaacccgatcactggttcgag
cccgttcaagtttgggagattaaatgcgctgatctgtcattgtcacctgtccataaagca
gccgtcggtattgttgatccagaaaaaggcatatctttgagattcccgagattcattcgt
attcgtgacgataagaacagcgaggaggccacgtctgctcagcaagtcgcaaatttatat
aacagccaggagcagataaagaatcagtcaacatcgacgaaagttactgaagaagatttt
tattaa

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