Ceratina calcarata (carpenter bee): 108625279
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Entry
108625279 CDS
T06061
Name
(RefSeq) LIM homeobox transcription factor 1-beta-like isoform X1
KO
K09371
LIM homeobox transcription factor 1
Organism
ccal
Ceratina calcarata (carpenter bee)
Brite
KEGG Orthology (KO) [BR:
ccal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccal03000
]
108625279
Transcription factors [BR:
ccal03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain LIM
108625279
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LIM
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
108625279
NCBI-ProteinID:
XP_017880637
LinkDB
All DBs
Position
Unknown
AA seq
409 aa
AA seq
DB search
MLEFYPPLPGSLNRQGESGPPTMGSAAPPIPFRPANDNNNAGHRAVISEPSVSVKTESGL
LETMCAGCGRTISDKYVMQVAGRNYHEECLSCAACGAPLTQSCFIRELKLYCRTDYERIF
SVKCARCMEKISCSDFVLRAPGLVFHVECFACCMCGQPLPPGAQYFLRQGQPICRRDYEH
ELYLNSPQDDDLLDENRPRDGRRGPKRPRTILTSAQRRQFKASFEVSPKPCRKVREALAK
DTGLSVRVVQVWFQNQRAKMKKLQRKAKTESGSDKEPKEERRAESPHSDHSHYLNAMNMR
DGESSSFPSATQPLNPNNPYSPDDAYPGHSGESFCSSDLSLDGTEAGFDIGESEGGGGQD
SGHQSSSHPHHGSASHEAPSLSQSLHAAIHNPIDKLFMMQSSYFSGDHA
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atgttggaattctaccctccgctacccggtagcttgaatcggcagggcgagtcgggacca
ccgaccatgggttccgctgctccaccgattccgttcagacctgccaatgacaacaacaat
gcagggcatcgggcggtaatttcagagccgtcggtctcggtgaagacggagtccggcctg
ctggagacgatgtgcgccggctgcggacgcacaatatcagataaatacgtgatgcaagtc
gctggacgaaattaccacgaggagtgtttgtcgtgcgcggcctgcggcgcgcccctcacc
cagtcctgtttcatccgcgagctgaagctctactgccggaccgactacgagcggatcttc
agcgtaaagtgcgccaggtgtatggagaagatcagctgctcggatttcgtgctcagggcg
cccgggctggtcttccacgtcgagtgttttgcgtgttgcatgtgcggtcaaccgttgccc
cccggtgcgcaatactttttacgccagggccagccgatctgccggagggattacgagcac
gagttgtacctgaacagtccacaggacgatgatttactggacgagaatcgacctcgcgac
ggccgcaggggtccgaaacggccgcgaacgatcctgacatcggcacaaagacgtcaattc
aaggcgtcgtttgaggtatcgccgaagccttgccggaaggttcgcgaggccctggcaaag
gataccgggctcagcgtccgagtggttcaagtctggttccaaaatcaacgggcgaagatg
aaaaagttacagaggaaggcgaagaccgagtctggatctgacaaggaaccgaaagaggaa
cgtcgagctgaaagtccccacagcgatcacagtcattacttgaacgccatgaacatgcgc
gacggggaatcttctagcttcccctcggccacccagccgctcaaccccaataacccgtac
tcgcctgacgacgcgtatccgggacattcaggcgaaagtttctgcagcagcgatctgtcg
ttggacgggacggaggctggtttcgacataggcgagagcgaaggcggcggcggtcaggac
agcggccaccagagcagcagccaccctcatcatggctccgcgtcccatgaggcaccctcg
ttatcgcaaagtttacacgcagcgattcacaaccctatcgacaaactgttcatgatgcaa
agtagttacttcagtggtgaccacgcgtaa
DBGET
integrated database retrieval system
