KEGG   Ceratina calcarata (carpenter bee): 108625374
Entry
108625374         CDS       T06061                                 
Name
(RefSeq) splicing factor 3B subunit 1 isoform X1
  KO
K12828  splicing factor 3B subunit 1
Organism
ccal  Ceratina calcarata (carpenter bee)
Pathway
ccal03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ccal00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    108625374
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ccal03041]
    108625374
   03036 Chromosome and associated proteins [BR:ccal03036]
    108625374
Spliceosome [BR:ccal03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    108625374
 Complex B
    108625374
 Complex C
   U2 SnRNP specific factors
    108625374
Chromosome and associated proteins [BR:ccal03036]
 Eukaryotic type
  Chromatin remodeling factors
   B-WICH complex
    108625374
SSDB
Motif
Pfam: SF3b1 PPP2R1A-like_HEAT TOR1L1_N HEAT_EZ HEAT_EF3_N HEAT_ECM29 HEAT_2 Htt_N-HEAT_1 XMAP215_CLASP_TOG UME CEP104-like_TOG DUF2298
Other DBs
NCBI-GeneID: 108625374
NCBI-ProteinID: XP_017880840
UniProt: A0AAJ7N7K7
LinkDB
Position
Unknown
AA seq 1314 aa
MDSIPRTHEDIEAQIREIQSKKKEIQNATAEKDQVGLGKTGFYDQDIYDGSNNKYEGYVT
SIAANDEIEEEDYEPTTFSTSKRPGYTAPAALLNDVAQSEKDYDPFADRRRPTIADREDE
YRQKRRRMIISPERVDPFAEGGKTPDIGSRTYTEIMREQLLKGEESELRKKLAEKAKEGT
LKANGEPKPAPKKRGRWDQTDDAPTPKKPTTTTATSWDNADVTPAAIRWDETPGHGKGGE
TPGATPGVSTRVWDATPGHATPGAATPGRETPSHEKAVSSRRNRWDETPKTERETPGHSS
GWAETPRTDRVVGDLIQETPTPSASKRRSRWDETPSNQTPGSMTPQTPATPLATPHQASI
LTPSGVTPTGPKAMGLATPTPGHLMSMTPEQLQAYRWEREIDERNRPLSDDELDALFPPG
YKVLQPPAGYIPIRTPARKLTATPTPIAGTPQGFFIQTEDKTAKFVDNQPKGNLPFMKPE
DAQYFDKLLVDVDEETLSPEEQKERKIMKLLLKIKNGTPPMRKAALRQITDKAREFGAGP
LFNQILPLLMSPTLEDQERHLLVKVIDRILYKLDDLVRPYVHKILVVIEPLLIDEDYYAR
VEGREIISNLAKAAGLATMISTMRPDIDNIDEYVRNTTARAFAVVASALGIPSLLPFLKA
VCRSKKSWQARHTGIKIVQQIAILMGCAILPHLKSLVEIIEHGLVDEQQKVRTITALAIA
ALAEAATPYGIESFDSVLKPLWKGIRTHRGKGLAAFLKAIGYLIPLMDAEYANYYTREVM
LILIREFQSPDEEMKKIVLKVVKQCCGTDGVEAQYIKDEILPHFFKHFWNHRMALDRRNY
RQLVDTTVEIANKVGASEIINRVVDDLKDENEQYRKMVMETIEKIMGNLGAADVDSRLEE
QLIDGILYAFQEQTTEDVVMLNGFGTIVNTLGKRVKAYLPQICGTILWRLNNKSAKVRQQ
AADLISRIAVVMKTCQEEKLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMTKMT
PPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGPEYVSAREWMRICFELLELLKAHK
KAIRRATVNTFGYIAKAIGPHDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVLP
ALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVSPLLEDALMDRDLVHRQTACA
AIKHMALGVYGFGCEDALIHLLNHVWPNVFETSPHLVQAFMDAVDGLRVALGPIKILQYT
LQGLFHPARKVRDVYWKIYNSLYIGGQDALVAGYPRIMNDPKNQYIRYELDYVL
NT seq 3945 nt   +upstreamnt  +downstreamnt
atggattccattccgagaacgcacgaagacatcgaagcacaaataagagaaatacagtca
aagaaaaaagagattcaaaatgcaactgcggagaaggaccaagtaggactaggaaaaact
ggtttttacgatcaagacatttacgatggaagtaataataaatatgaaggctacgttaca
tctattgcggccaatgatgaaattgaagaagaagattatgaaccgacaactttcagtacc
agtaagagacctggatacactgcaccagcagcgttactcaatgacgtcgcacagagtgaa
aaagattacgatccattcgcggacagaagaagacccaccatagctgacagggaggatgaa
tatagacaaaaaaggagacgaatgattatctcaccagaacgtgttgatcctttcgcagaa
ggtggtaagacgccggacatcggttctaggacgtacaccgagattatgcgagaacagtta
ctcaaaggggaagaatctgagttaagaaagaaattagcggagaaagctaaggagggaacg
ttgaaagcgaacggtgaacccaaacctgcacctaagaaaagaggtcgttgggatcaaacg
gacgatgctccaacgcctaagaaaccgactaccaccacagctacatcttgggacaatgcc
gacgtaacaccggcagctatcagatgggacgagacgcctggacatggtaaaggtggagag
actcctggcgcaacgccaggcgtgagcacgcgagtgtgggacgccactccaggacacgcc
acgcctggcgcagccacgccgggcagagaaactccgtctcatgagaaagctgtttcgagc
cgtagaaatcgttgggacgaaaccccgaagaccgagcgtgaaactccgggtcatagcagt
ggttgggcagaaacaccgcggacagatcgggtcgtgggagatttgattcaagagacgcca
acaccttccgcgagtaagcgtcgcagccgatgggacgagacgccttccaaccagacgcct
ggatcgatgacgccgcaaactccagcgactccactcgcgacgccgcatcaggcttcgatt
ctgactcctagtggagtaacgccgacggggccgaaagctatgggcttagctacacctacg
ccgggacatttgatgtcgatgaccccggaacagctccaggcttatcgctgggaacgtgaa
atcgacgagaggaacaggcctctctcggacgacgaattggacgctctgttcccgcctgga
tacaaagttttgcaaccacccgcaggatatataccgattcgtacgcccgcgagaaagctc
accgcgactccgacaccgatcgccggtacgccgcaaggatttttcattcaaaccgaggat
aagaccgcgaagttcgtggacaatcagccgaaaggtaatctgcctttcatgaaaccggag
gacgcgcaatatttcgacaaactgttggtcgacgttgacgaggagacgctcagccccgag
gagcagaaggagaggaagatcatgaaattactgttgaaaattaagaacggcacgccgcca
atgaggaaagccgctttgagacagatcacggataaagcgagagagttcggcgctggtccg
ttgttcaatcaaatactacccctgctcatgtctcctactctggaagatcaagagcgtcat
cttcttgtaaaagtgatcgatcgtattctttacaaactcgacgatttggtcaggccttac
gtccacaagattttggtcgtcatcgaacctttgttgatcgacgaggactactacgctcgt
gtagagggcagagaaatcatctcgaacttagcgaaagccgcgggtctcgcgacgatgatc
tccacgatgaggccagatatcgacaacatagacgagtacgtgcgaaatacaacggccaga
gcgttcgccgtggtcgcatcggcattgggaattccctcgctgcttccatttctgaaagct
gtgtgccgtagcaagaaatcatggcaggcccgtcacacgggcatcaaaattgtccagcaa
atcgctattctcatgggatgcgctatattgccgcatttgaagagtttagtcgaaatcata
gaacacggtttggtcgacgagcaacaaaaagttcgtactattaccgctttagcgatcgct
gcgttagccgaagcagccactccgtacggtatcgaaagcttcgactctgtcttaaaacct
ctttggaagggtattcgtacacacagagggaaaggtctcgccgcgttcttaaaagccatt
ggttatttaattccccttatggacgctgaatacgctaattattatactcgcgaagtaatg
ttaattcttattcgtgaattccagtcgccggatgaggagatgaagaagattgttttaaaa
gtagtgaaacaatgttgcggaacggacggtgtagaagcgcaatatatcaaggatgaaatt
ctgccgcacttcttcaaacatttctggaaccaccgaatggctttggatcgtagaaattat
agacagcttgtggacacgacggtggagatcgcgaataaagtcggcgcgtcagaaatcata
aaccgagtggtggacgatctgaaggatgagaacgagcagtacagaaagatggtcatggag
acgattgaaaagatcatgggtaatttgggagccgcggacgtcgattctcgcctggaggag
cagctcatcgatggtatcctatacgctttccaggaacagacaacagaggacgtcgtgatg
ttaaatggtttcggtaccatcgtcaacacgttaggcaagagagtgaaagcgtatcttccg
caaatatgcggtacgatactgtggagattgaataacaaatctgctaaggtgaggcagcaa
gctgccgatttgatatcacgaatcgccgtcgtcatgaagacttgtcaggaggagaaattg
atgggtcatttgggcgtcgttctttatgaatatctgggcgaagaataccctgaagtgtta
ggtagcattttgggcgcgctgaaagctatcgtcaacgtgataggaatgacaaaaatgaca
ccgcctatcaaggatctgctaccgcgactcactcccattctaaagaacagacatgagaag
gtacaagaaaattgtatagatctcgttgggaggatcgcggacagaggacccgagtacgtg
tccgctagggaatggatgaggatctgtttcgaactgttggaactgttgaaagctcataag
aaggcgatcagaagagccacggtgaacacgttcggttacattgcgaaggcgatagggcct
cacgacgtgttggcgactcttctgaacaatttgaaagtgcaagagcgtcagaatcgtgta
tgcaccacggtagctatagccatcgtggccgaaacttgcagtccgttcacggtactgccc
gcattgatgaacgagtacagggtgccggagttgaacgtgcagaacggtgtattgaagtcc
ctctctttcttattcgagtacatcggtgagatgggaaaggattacatttacgctgttagt
ccgctgttagaagacgcgctcatggacagggatttggtgcacaggcaaaccgcgtgcgcc
gctataaagcacatggcgttgggtgtctacggtttcggatgcgaggacgcgttgatacat
ttattgaatcacgtttggcccaacgtttttgagacatcgccgcatttggtacaagcgttt
atggacgccgtagatggtttgcgcgtcgctctcggaccaatcaaaatactgcaatacact
ttacagggattgttccatccggcacggaaggtacgggacgtatattggaagatctacaat
tccctttacataggcgggcaggatgctctcgtagccggctaccctcgaatcatgaacgat
ccaaagaatcaatacattagatacgaactggactacgttttgtaa

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