Ceratina calcarata (carpenter bee): 108625493
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Entry
108625493 CDS
T06061
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
ccal
Ceratina calcarata (carpenter bee)
Pathway
ccal03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ccal00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108625493
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccal03041
]
108625493
Spliceosome [BR:
ccal03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
108625493
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
EIF3I
WDR55
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
PRP4
ANAPC4_WD40
Beta-prop_TEP1_C
Beta-prop_EML
Beta-prop_EIPR1
NBCH_WD40
Beta-prop_DCAF4
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
Beta-prop_IFT122_1st
Beta-prop_SCAP
WD_LRWD1
Ge1_WD40
Beta-prop_SPT8
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
Beta-prop_Nup120_160
Beta-prop_HPS5
WD40_like
Nbas_N
Tlp
Motif
Other DBs
NCBI-GeneID:
108625493
NCBI-ProteinID:
XP_017881049
UniProt:
A0AAJ7N784
LinkDB
All DBs
Position
Unknown
AA seq
525 aa
AA seq
DB search
MSDDEDLTYVKKLKTVHYGSLEEVERARLAAVAESSEEEKDGTNLGDSINSTTTLGNIHI
SNEYMELEDEMSKDRQALLEEFERRKKARQINVSTDDSEVKKNLRQLGEPICLFGEGPAD
RRTRLRELLANLGEDAIKKKHEEEEKPLHPIERDTETTWYHEGPESLQIARSWIATYSLP
RAKARLDKARQDLELPTATRTARRQELLKKLQALTIYCSQIGDTRPISFCQFSPNSKLLA
TASWSGLCKLWSVPDCTLLRTLKGHTCNVSCIVFHPKATITEEVVGEKTGQTCVLASCAS
DGTVKLWSGGSGEEPLAEVEGHEPHRVSRLAFHPSGRLLGTCCYDASWRLWDLEQQAEVL
HQEGHARAVHCISFQCDGSVSATGGHDSFGRVWDLRTGRCIMFMEGHLKSIFGIDFSPNG
FHIATASEDNTCKIWDLRKRSCIYTIPAHTNLLSDVKYQRIEGQYLVTASYDNTAKIWSN
KTWQPLKTLPGHDGKVMSVDISPDHKFIGTTSYDRTFKLWAPENV
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atgtcggatgatgaggatttgacgtacgtcaagaaattgaaaactgttcattatggatcg
cttgaggaagttgagcgtgctagattggctgctgttgcggagtcctctgaagaagagaaa
gatggaacaaatttgggtgacagcattaattcaacaacaactttgggaaatattcatata
tctaatgaatacatggaattggaggatgaaatgtccaaagatagacaagctctcttagaa
gaatttgaacgtagaaaaaaagctcggcagattaatgtgtctacagatgattcagaagta
aaaaagaacttgagacaattaggggaacctatttgtttgtttggtgaaggaccagcagat
aggaggacaagattaagagaattattggccaatttaggcgaagatgcaattaaaaagaaa
cacgaggaagaagaaaaacctttgcatccaattgaaagggatacagaaacaacatggtac
catgaagggcctgaatctcttcaaatagctcggtcttggatagccacatattcgttgccc
agagcaaaagctagattggataaggcgaggcaagatttggaactgcctacagccacgcgc
acggcccgtcgtcaggaacttctgaaaaagttgcaagcgttgacaatctattgttcgcaa
attggcgatactaggccgatctcgttctgtcagttcagcccgaactcgaaactgctcgcg
acagcttcatggtcaggcttatgtaaactatggtctgtacctgactgtacactgttaaga
acacttaaaggacacacttgtaatgttagctgcattgtttttcatccaaaagctacgatt
accgaagaagtggtaggagagaaaactgggcaaacatgtgtactggcatcctgtgcttcc
gatggaacggtgaaattatggagcggtggatctggtgaggaacctttggccgaggttgaa
ggtcatgagccacatagagtctcgagactggcctttcatccatctggtcgattgcttgga
acatgctgttatgatgcatcttggaggctttgggatttggaacagcaagcagaagtttta
caccaagagggacatgccagagctgtacactgtattagttttcagtgtgacggtagcgta
agcgccacaggtggtcacgactccttcggccgagtttgggacctacgtacaggtcgatgc
attatgtttatggaaggccacttgaaatcgatttttggcatcgacttctcaccgaatggt
ttccatatagctacagcaagtgaggataacacttgcaagatatgggacttgcgtaagagg
tcttgcatttacactatacccgctcacacgaacttattgtcggacgtgaaataccaaagg
atagaaggtcagtacctggtcacggcctcgtacgacaatactgccaaaatatggtcgaac
aaaacttggcaaccccttaagacgttaccagggcatgatggcaaagtaatgtctgtcgac
atttcacccgatcacaaattcatcggtaccacgtcttatgatcgaacgtttaaactatgg
gcaccggaaaatgtataa
DBGET
integrated database retrieval system
