Ceratina calcarata (carpenter bee): 108625622
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Entry
108625622 CDS
T06061
Name
(RefSeq) LOW QUALITY PROTEIN: histone deacetylase 6
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
ccal
Ceratina calcarata (carpenter bee)
Brite
KEGG Orthology (KO) [BR:
ccal00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ccal01009
]
108625622
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccal03019
]
108625622
04131 Membrane trafficking [BR:
ccal04131
]
108625622
03036 Chromosome and associated proteins [BR:
ccal03036
]
108625622
Enzymes [BR:
ccal01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
108625622
Protein phosphatases and associated proteins [BR:
ccal01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
108625622
Messenger RNA biogenesis [BR:
ccal03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
108625622
Membrane trafficking [BR:
ccal04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
108625622
Chromosome and associated proteins [BR:
ccal03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
108625622
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
zf-UBP
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
108625622
NCBI-ProteinID:
XP_026669951
UniProt:
A0AAJ7WB67
LinkDB
All DBs
Position
Unknown
AA seq
1204 aa
AA seq
DB search
MDSMIHKDLFTAAKQLADSEIELIKTIENSKTANNKNIKNAMSMTQKKSAKQSKRPSKVQ
PSAALMAAKREAAQKRGLQGKKSNSDYVHDIYQKVIDAYNTKRMETGLVFDNSMIEHRCL
WDKNYPECPERLTRVLQRCQELGLISRCKLITPRKATESEILMKHSQEQIDILKATDEFM
DTDTLELLSSKYDAIYVHPSTYQTSLLAVGSTINLVESICKGEVQNGMAIIRPPGHHAMK
SEYCGYCFFNNVAIAAEKVLHNNLASKILIVDWDVHHGQATQQMFYNDPRVIYFSIHRYE
NGEFWPNLRESDFHFVGSGPGEGYNFNVPLNKTGMTNADYLAIFQQILLPMAYEFQPDLV
IVSAGYDAALGCPEVKXLLFVCSXXXXXXXXXXXXEMLITPACYAHLLSSLLCLASGKVA
VILEGGYCLKSLAESAALTLRTLLGDPCPMLETLRSPSLSIRETILNTIYAHKPYWKCYQ
YQDTYSINNITNNKDENNQHLPVVVFKGTDIKLEVYETRNCYPVQSKEFIDMMEKQLNAL
ILNANLSKAAHKVCIVYDDRMSKHCNISDGSHPERPNRINAIYKKCQECNLLERCHVQQG
RSATMEELLLVHSKEYIDKVKGIENLKPKELQKQAATYDSVYFHPETWSSACVSAGSLLQ
VVDNVLNGDSQTGVAIVRPPGHHAGEDAACGFCIFNNIAIAARYATEVHDLKRILIVDWD
VHHGNGTQSIFEEDPKVLYMSVHRYDNGAFFPNSKRANYSYVGSGVGVGFNVNIPWNKKG
MGDAEYIAAFQQVVMPIAYEFNPELVLVSAGFDACTGDPLGGCFVTPEMYGHLTHWLSSL
ANGRVILSLEGGYNINSISHAMTMCTKSLLGDPLPMLETGQIPCTSAVHTIHNVLKTQKE
YWVSLAFSVSLPKEKVLPEAKVAFAKTNERVLTSEGLLDLPESKIALEEVETEKMPHRRN
KFSILKLMKPGTLENWEKCAEEIECIKSKQTAHCEGTQMLHMEGRNDTSNYYKSQDCQSS
HSIIFIGYSKCLTSCADQNEKEGSSNKNYTDSTAGSSSNERNEGAIAQSSGKQNLQAYLS
ENLQSLIAGDMFAVIPLRECPHLDSVSDVPDARIDVHLPCTECGSTDENWICLQCYTVHC
ARSVNQHGLLHAEETDHPLALSFSDLSVWCYKCEAYIDNPRLFAARNAAHQSKFNEELPW
TYSD
NT seq
3615 nt
NT seq
+upstream
nt +downstream
nt
atggattctatgatacacaaggatttatttactgctgctaagcagttagcagacagtgag
atcgagttgataaagactatagaaaattctaagacggcaaataataaaaatattaaaaac
gccatgtctatgacacagaagaaaagtgcaaagcagtctaaaagaccatcaaaagttcag
ccatcggctgctctgatggcagccaaacgggaagcagcacaaaaacgtggattgcaaggg
aaaaagtctaacagtgattatgtgcacgatatatatcaaaaagttatcgatgcttataat
acaaaaagaatggaaacaggtcttgtatttgataattctatgatagaacacagatgtctt
tgggataaaaattatccagaatgccctgaaagattgacaagagtcttacaaaggtgtcaa
gaattgggcttaataagtagatgtaaattgatcacaccaaggaaagctacagagagtgaa
atactcatgaagcacagtcaagagcaaatagatattttgaaggccactgacgaatttatg
gatacagacactttagaattattatcatcaaaatacgatgccatttatgtacatccttct
acctaccaaacatctctgttggctgtgggctcgacgataaatttagtggaaagcatttgc
aaaggagaagttcagaatggaatggctattatcagaccgcctggacatcatgcaatgaag
tcagaatattgtgggtattgtttctttaataacgttgcgattgctgctgaaaaggtgtta
cacaataatttagctagtaaaattttgatcgttgactgggatgtacatcacgggcaagct
acgcaacaaatgttttataacgatcctcgagtaatttacttttctattcaccgttacgag
aatggtgaattttggccaaatcttagagaatctgactttcattttgttggatctggccca
ggcgaagggtataatttcaatgtgccacttaataaaactggtatgacgaatgctgactat
ttagccatatttcaacaaattttattaccaatggcttacgagtttcaaccagatcttgta
atagtgtcagctggttatgacgcagctttgggctgtccagaggtaaaataattattattt
gtttgttcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngagatgttaataaca
cccgcatgttatgctcacttattatcatcgttactatgtttggcctctggcaaagttgct
gttatattggagggtggctattgtttaaaatcattagctgaaagtgcagcgttaacatta
cgtactttactaggcgatccatgccctatgttagaaactcttcgttcaccttcgttaagt
atacgtgaaaccattctaaatacaatttatgcacacaaaccatattggaagtgttatcag
tatcaagatacgtacagtattaacaatataacaaataataaggatgagaataatcaacat
ttacctgttgttgtattcaaaggaactgatattaagctagaagtatatgaaacgcgtaat
tgttatccagttcagagtaaagaatttattgacatgatggagaaacaattaaatgctttg
atactaaatgctaacttatctaaagccgctcataaagtgtgtatcgtttatgatgataga
atgtcaaaacattgtaatatatctgatggcagccatccggaaagaccgaatcgtattaat
gctatttacaaaaagtgtcaagagtgcaatctactcgagcgatgtcacgtgcaacagggt
cgcagtgcaacgatggaagaattactattagttcactcgaaagagtacatagataaagtt
aaaggcatagaaaatttaaaaccgaaggagctgcagaagcaggcggcaacttatgattca
gtttatttccaccctgagacctggtcaagtgcctgtgtatctgctggatcattgttacaa
gttgtcgataatgtattaaatggagatagccaaactggcgtggctattgtaagaccgcca
gggcatcatgctggagaggatgcagcatgcggtttttgcatttttaacaatattgcaata
gcagctagatatgcaacagaagttcatgatttaaaaagaatattgatagtggattgggat
gtacatcatggtaatggaactcaatcaattttcgaggaagaccccaaagttctctatatg
tctgtacatcgttatgataatggcgctttcttcccgaattcaaaaagagccaattactct
tatgtcggttctggcgtaggagtaggttttaacgtaaacataccatggaacaagaaagga
atgggtgacgcagagtatatagcggcatttcaacaagtagtaatgccaattgcttatgaa
tttaatccagagttagtcttagtttctgcgggcttcgacgcgtgtactggcgatccgctt
ggaggctgctttgtaacgccagaaatgtatggccatttgactcattggttatcctctttg
gctaatggtcgtgttattcttagtctcgagggaggctataatatcaattcaatttcacat
gcaatgacaatgtgtacgaaatccttgcttggcgatcctttaccaatgttagaaactgga
caaattccatgcacgagtgccgttcatacgatacataatgttctgaaaactcaaaaggag
tattgggtaagtttagcattcagtgtatccttaccaaaagaaaaagtattaccagaagcc
aaagtagccttcgcgaagacgaatgagcgagttctaacaagcgaaggattattggatctt
ccggaatcgaagatagcattggaggaagttgaaactgaaaaaatgccgcacaggcgaaac
aagttttcaattttgaagttaatgaaaccgggaacgttggaaaactgggaaaagtgtgca
gaagagatagaatgcataaaaagcaaacagactgctcattgtgaaggtacacaaatgtta
cacatggaagggagaaatgacacttcaaattactacaaatcacaagattgtcaatcgtcg
cattcaattatttttataggatattcgaagtgtctaacgagttgcgcggatcagaatgag
aaagaaggaagttccaataaaaattatacggattctactgctggtagtagtagcaatgaa
cggaacgagggagcaattgcacaatcaagcggaaagcagaatttacaggcttacctgtct
gaaaatttgcaatcattaatagctggagatatgttcgcggtaataccattacgggaatgt
ccgcatttggatagcgtgagtgatgtgccagatgcaagaatcgatgtacatttgccgtgt
acggaatgtggaagcacagacgaaaattggatctgcttacagtgttacaccgttcattgt
gcacgttcggtcaatcaacacggtttattacatgcagaagaaacagaccatccgttggcg
ctaagtttcagtgatttgtctgtttggtgttacaagtgcgaagcgtatatagataatcca
cgattattcgctgcacgtaatgccgcacatcaaagtaaatttaatgaggaactgccttgg
acctacagtgattga
DBGET
integrated database retrieval system
