Ceratina calcarata (carpenter bee): 108625633
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Entry
108625633 CDS
T06061
Name
(RefSeq) probable nuclear hormone receptor HR3 isoform X1
KO
K14033
nuclear receptor subfamily 1 group F member 4
Organism
ccal
Ceratina calcarata (carpenter bee)
Brite
KEGG Orthology (KO) [BR:
ccal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccal03000
]
108625633
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
ccal03310
]
108625633
Transcription factors [BR:
ccal03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
108625633
Nuclear receptors [BR:
ccal03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
108625633
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Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
108625633
NCBI-ProteinID:
XP_017881271
UniProt:
A0AAJ7N7V7
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Position
Unknown
AA seq
637 aa
AA seq
DB search
MAESAASPGSVQVAANSPQQQSQQTQQNPQPPDISSSQLASPPITGTGTNRKRSRSSAQI
EIIPCKVCGDKSSGVHYGVITCEGCKGFFRRSQSSVVNYQCPRNKNCVVDRVNRNRCQYC
RLQKCLRLGMSRDAVKFGRMSKKQREKVEDEVRFHKAQMRAASETAPDSSVFEHQTPSSS
DQHHPYNGGYAYSSEYASPGPGTGGSGYYNHQAMTNYELSADYVDSTTTYDPRPTQTQVA
DTVAPDTPSAVTATGVLPSVVTTGKSLSASTTGSSTGGSGGGSSGGGGGGGGNGGGSGGG
GSGGGGSGSGTGSGAAAGGGGGAGSLSGGGIVAVKQETTVELASLGHGSYTMVDSTTFLS
GQQQRVSNPSEDDEVPSLPSMSHARYPAQISELLSKTIADAHARTCLLSTEQIQESFRRP
HDLSRLIYYKNMAHEQLWQECAQKLTTVIQQIIEFAKMVPGFMKLSQDDQIVLLKAGSFE
LAVLRMSRYLDLQQNCVLYGDTMLPQDAFYTTDTAEMKLVSCVFEMARSIAELKLTETEL
ALYSAAVLLSPDRSGLKGLPEIERLSQAVIKALRSELDRNHVSPIKGDVTVCDAILAKIP
QLREISQLHMDALAKFKRSQPLLEFPALHKELFSVDS
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atggcggaaagcgcggccagtccgggttccgtgcaggtggctgcgaatagtccgcagcaa
caatcgcaacaaacacaacagaatccacaaccgccggatataagcagctcgcagttggcg
tcaccaccgatcacgggcacaggtacgaataggaaacgatcgagatcttccgcccagatc
gaaataatcccgtgcaaggtgtgcggcgacaagagcagcggcgttcattatggtgtgatc
acctgcgagggctgcaaaggcttcttcaggcggtcccagtcgtcggtcgtcaactatcaa
tgtccacggaacaagaattgcgtggtcgaccgtgtaaacagaaaccggtgccagtactgt
cggttgcaaaagtgcctacgcctcggcatgtccagagatgccgttaaattcgggcgcatg
tcgaaaaagcagcgggagaaagtcgaggacgaagttaggttccacaaggcacaaatgaga
gcggcctcggagacggcgcccgatagcagtgtatttgaacatcagaccccaagcagttcg
gatcaacatcatccttacaacggcgggtatgcatatagtagtgaatacgcatctcccggc
cccggcacgggtgggtcgggatattacaatcatcaagcgatgacgaactacgagcttagt
gccgattacgtcgacagcacgacgacctatgatccacgaccgacgcagacgcaggtcgcg
gacactgtcgcccctgatacgccctccgcagtcaccgcgactggggtacttcccagcgtg
gtcacaaccggaaagtcgctgtctgcctcgacgaccggaagcagtacggggggtagtggt
ggaggtagtagcggcggtggcggtggtggcggtggtaacggtggtggatccggtggcggc
ggctcgggtggtggaggaagcggttctggcactgggagcggcgcggccgccggtggcggt
ggcggtgccggttccttgagcgggggtggaatcgttgctgtgaagcaagagaccaccgtc
gaactggccagcttaggccacggctcgtacacgatggtcgactcgacgacctttctgagc
ggtcagcaacagagggtcagcaatccatccgaggacgacgaagtgccgagtctgcccagt
atgtcccatgcgagatatccggcacagatcagcgagctgctttcaaaaacgatagcggat
gcacacgcgagaacgtgtttgctgtcgacggaacagatccaggagtctttccggaggccg
cacgacctctccagactgatctactacaagaacatggcgcacgagcagctttggcaagaa
tgtgctcaaaaactaaccaccgtcatccagcagatcatcgaattcgctaagatggttcct
ggattcatgaaactctcgcaggacgaccagattgttctattaaaggctggttccttcgag
ttggctgtgctacgtatgagcaggtacctcgatctccagcagaactgtgtcctctatggt
gacactatgttaccacaggatgcgttttacacgacggacacggcagaaatgaagctcgtc
tcttgcgtgtttgagatggccaggagtattgccgaattgaagcttacggaaacagaactg
gctctttacagcgcagcggttcttcttagccccgatcggtcgggactgaaagggctcccg
gaaatcgagagactgtcacaggcagtgatcaaggcgctcaggtcggagttggatcgcaac
catgtgtcgcccataaagggcgatgtgacggtgtgcgacgcgatcctcgcgaagataccc
cagttaagggagatctcacagctgcacatggatgctctggcgaagttcaaacggtcgcag
ccgctcctcgagttcccggccctccataaagagcttttcagtgtcgacagctga
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