Ceratina calcarata (carpenter bee): 108625796
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Entry
108625796 CDS
T06061
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm6
KO
K12625
U6 snRNA-associated Sm-like protein LSm6
Organism
ccal
Ceratina calcarata (carpenter bee)
Pathway
ccal03018
RNA degradation
ccal03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ccal00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108625796
09123 Folding, sorting and degradation
03018 RNA degradation
108625796
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccal03019
]
108625796
03041 Spliceosome [BR:
ccal03041
]
108625796
Messenger RNA biogenesis [BR:
ccal03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
108625796
mRNA degradation factors
5'-3' decay
Lsm complex
108625796
Spliceosome [BR:
ccal03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
108625796
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
108625796
NCBI-ProteinID:
XP_017881563
UniProt:
A0AAJ7J0A8
LinkDB
All DBs
Position
Unknown
AA seq
79 aa
AA seq
DB search
MSRKEALSQFIQQIHGRPVVVKLNSGVDYRGVLACLDGYMNIALEQTEEYVNGQLKDKYG
DAFIRGNNVLYISTQKRRT
NT seq
240 nt
NT seq
+upstream
nt +downstream
nt
atgagccggaaagaagctttatcccaatttattcaacaaatacatggacgtccagttgtt
gtaaaattaaatagtggcgtggattatagaggtgttttggcttgtctagatggttatatg
aatatagcacttgaacaaacagaagaatatgtaaatggtcaattaaaggataaatatggt
gatgcctttattcgtggtaataatgtattatatattagtacacaaaaacgtaggacctaa
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integrated database retrieval system
