Ceratina calcarata (carpenter bee): 108626377
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Entry
108626377 CDS
T06061
Name
(RefSeq) lys-63-specific deubiquitinase BRCC36-like isoform X1
KO
K11864
BRCA1/BRCA2-containing complex subunit 3 [EC:3.4.19.-]
Organism
ccal
Ceratina calcarata (carpenter bee)
Pathway
ccal03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ccal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
108626377
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ccal01002
]
108626377
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ccal04121
]
108626377
03036 Chromosome and associated proteins [BR:
ccal03036
]
108626377
03400 DNA repair and recombination proteins [BR:
ccal03400
]
108626377
Peptidases and inhibitors [BR:
ccal01002
]
Metallo peptidases
Family M67
108626377
Ubiquitin system [BR:
ccal04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
108626377
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
JAMM
108626377
BRISC complex
108626377
Chromosome and associated proteins [BR:
ccal03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
BRISC complex
108626377
DNA repair and recombination proteins [BR:
ccal03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-A complex
108626377
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRCC36_C
JAB
Prok-JAB
UPF0172
RM2_Med14
Motif
Other DBs
NCBI-GeneID:
108626377
NCBI-ProteinID:
XP_017882500
UniProt:
A0AAJ7S316
LinkDB
All DBs
Position
Unknown
AA seq
253 aa
AA seq
DB search
MDTLALKKVQLQTDVYMVCLQHALSTEKFEVMGLLLGNTESSVAEIMAVIILNRLDKQKD
RVEISSEQLAKACDVAEQLKKELQRPVRVLGWYHSHPHITVCPSHVDCRTQTSYQMMDPS
FVGLIFSVFSENKESKEQEISLICFQSHNDKEVEIPLEIVHTPMISNTCLKTMTDLIKIF
VQEEEEMAETCKDQQDILVNIHNDAVRTRALVHITDIITKPLILTFEKRLALNKLRAAYL
RKQLQELQGVCNG
NT seq
762 nt
NT seq
+upstream
nt +downstream
nt
atggatacgttagcattaaaaaaagtacaattacagactgatgtatatatggtatgctta
caacatgctttatcaacagaaaagtttgaagtaatgggcttgctccttggaaatacagag
tccagcgttgcagagattatggcagttattatcttgaatcgtttagataaacagaaagac
agggtagaaatttcgtcagaacagttagcaaaagcttgtgatgtggcagaacaattgaaa
aaagaattacaacgtcctgtacgtgttctaggatggtatcattctcatccacacatcacg
gtttgtccatctcacgttgattgtagaacgcaaacgagttatcaaatgatggatcctagt
tttgtgggtttaatattctcagtattttcagagaataaagaatcgaaggaacaagagatc
tctttaatttgtttccaatctcataatgacaaagaagtggaaattccactagaaattgta
cacacaccaatgatatcaaacacatgtttgaaaacaatgacggatttaataaaaatattt
gttcaagaggaagaagagatggcagaaacatgcaaagaccaacaagatattcttgtcaac
atacacaatgatgctgtgaggacgcgagcactggtccacataactgacataattactaag
cctttaatattgacgttcgagaagagactagctttaaataaattacgcgctgcatacctc
cggaaacagctgcaagagctacaaggcgtatgcaacggataa
DBGET
integrated database retrieval system
