Ceratina calcarata (carpenter bee): 108626687
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Entry
108626687 CDS
T06061
Name
(RefSeq) vam6/Vps39-like protein isoform X2
KO
K20183
Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39
Organism
ccal
Ceratina calcarata (carpenter bee)
Pathway
ccal04140
Autophagy - animal
ccal04142
Lysosome biogenesis
ccal04145
Phagocytosis
ccal04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
ccal00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
108626687
04142 Lysosome biogenesis
108626687
04140 Autophagy - animal
108626687
04148 Efferocytosis
108626687
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccal04131
]
108626687
Membrane trafficking [BR:
ccal04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
108626687
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps39_1
CNH
zf-Vps39_C
TPR_Vps41
VPS18_solenoid_2nd
Clathrin
Beta-prop_RIG_2nd
Beta-prop_WDR36-Utp21_1st
Zn-C2H2_12
zf-Di19
AP_endonuc_2
B129_C2H2-zf
Motif
Other DBs
NCBI-GeneID:
108626687
NCBI-ProteinID:
XP_017882997
UniProt:
A0AAJ7J312
LinkDB
All DBs
Position
Unknown
AA seq
891 aa
AA seq
DB search
MHNAYEESSILNITVQIESMAAYDDNLLIGTREGHLLMYNVPSVPDEHHKLELLRHSKNF
NKKRITQIEVVPEYNLLIILTDNIVCVHDLNSPNFQQVCQLQKTRGAILFALDVQSTQSL
TGEKNTVVRLCVAVKRKLQLYYWKGKKFVEFKDFELTIPDIPRELCWCGEALVLGFRGLS
YTILDLNGKTKELFPTGKSPEPSVTKLSDSSFVLGKDSQSFVMDTKGELVQHNPVKWTDI
PSAIAWDDPYLLGIVHDKLEVYTIDGCLHIQTIKDLNKARLIYRCRQGKVFVASTSHIWC
VRAVDVTLQIRTLLEQTQFQLALKLTSLSDVSEEEKTKQIYKIQTLYAHHLFRNKRFQEA
MDLFLKLGTDPYEVIMLFPDLVTPSVNNEVSDQTELPKLQDHDLEKGLRALIVFLTEVRH
KLMSDNTSKGNGRPKENGKDKSLLLLMEGEKNMTAVATEQLLKIIDTTLLKCYLQTTDAL
VAPLLRLNHCHLAEAEKTLLMHQKYPELIILYQTKGQHRKALELLEKHAKENDSSLKGTA
RTIQYLQHLGKDHMDLILKFAGWVLNEDPEQGLRIFMEDIQEVEQLPRPKVLDYLLRSHK
DLAITYLEHVVHVWEDTNPLFHNVLIHQYKEKCLTCLSEDATPAEKQMAQHVRQKLQQFL
EKSAHYTPETILVHFPFDRLFEERAIILGRVGGHQQALSIYINLLNDVQKATEYCHNVYT
AYHQNHRENADKQKQSDGGADQVYVLLIQQLLTEPEQRAATGCGSPEIQRTAQPDLEMAL
QLLEKHASKINPLKALEVLPDTVPIGRIKHFLEVSLQEKLNARRRIQVLKGLLCAEHLQV
QEQRMHYESQSVLMTEFNICPVCKKRFGNQSAFARYPNGEIVHYSCQDRKG
NT seq
2676 nt
NT seq
+upstream
nt +downstream
nt
atgcataacgcttacgaggaatcgtcgatattgaacatcactgtccaaatagaatcgatg
gctgcatatgatgacaatttactgattgggacgagggagggtcatctcctcatgtacaac
gtaccctctgtgccagacgaacatcacaaattggagttactaaggcatagtaaaaatttt
aacaagaagcgtatcactcagatagaagtagtgccagaatataatttattgatcatttta
acagataatatagtatgcgttcacgatttaaactctccgaattttcaacaagtttgccag
ctgcaaaagactcgtggtgctatattattcgctttagacgtacagtcgacccagagtctg
actggtgaaaagaatacggtcgtacggttgtgcgttgccgtgaaacgtaaactgcaattg
tattattggaaaggtaaaaaatttgtcgagttcaaagatttcgaattgactataccagac
ataccacgtgaattatgctggtgtggagaggcgttagtcttgggtttccgcggtctgtcg
tacactatcttggatctaaatggaaagaccaaagaactgttcccaactggaaagtctccc
gaaccgagcgtcaccaaattatccgattcgtcgttcgtattgggaaaggattctcagtct
ttcgtaatggacaccaaaggggaattggtccagcataatccagtaaaatggaccgatata
ccgagcgcgatagcttgggacgatccttacttgctcggaattgtacacgataaattggaa
gtctacacgatagacggttgcctccacatacaaaccataaaagatttgaacaaagccagg
ctcatatacagatgtagacagggaaaagttttcgtagcttctaccagtcatatctggtgt
gtgagggcggtggacgtgacgcttcaaatcaggacgttactcgaacaaacccagtttcaa
ctagcactgaaactgaccagtttatcggacgtgtccgaggaagagaagacgaaacaaata
tacaagattcaaacgctgtacgctcatcatctgtttcgtaataaaagatttcaagaagcg
atggacctgttcttgaaactggggacagacccgtacgaagtgataatgctgttccccgat
ctggtcacgccgtcggtcaacaacgaggtcagcgatcaaaccgagttgccgaaactccag
gatcacgatttggaaaagggtctgcgcgcgttaatcgttttcctcacggaggtgcgacac
aaattgatgagcgacaacacctccaaaggaaacggaaggccgaaggaaaacggcaaagat
aagagcctgttgctgctgatggaaggagaaaagaacatgacagcggtagccacggagcag
ttgttaaaaatcatagacacgactctgttaaagtgttatttgcagactaccgacgcacta
gtagctccgttgcttcgactgaatcactgtcatttagcggaagctgagaaaacgttgtta
atgcatcaaaagtatcccgagctcattatactgtaccaaaccaaggggcagcatagaaaa
gcgttggagcttctcgagaaacacgcaaaggagaatgattctagtctgaagggcactgcg
agaacgatacagtacttacaacacctcggcaaagatcacatggacttaatcctgaaattc
gctggctgggtcttgaacgaagatccggaacaaggactcagaattttcatggaggacata
caggaagttgaacaattaccaaggccgaaggtattggattatcttctccgctctcacaag
gatctagccataacgtatttggagcacgtggtacacgtttgggaagacaccaatcccttg
ttccacaacgttctgatacaccagtacaaagagaaatgtttgacgtgtttgagcgaggat
gccacgccggccgagaagcagatggctcaacacgtcagacagaaattgcaacagttcctg
gagaagtccgctcactacaccccagaaacgatactggtgcattttccgttcgaccgcttg
ttcgaggaacgtgcgattatcctcggacgtgtcggagggcatcagcaggctctctcgata
tatattaaccttctcaacgatgtacaaaaggcgaccgagtactgtcacaacgtctacact
gcgtatcatcaaaaccatcgagaaaatgcagataaacaaaaacagtcggacggtggagct
gatcaagtgtatgtgctgcttattcaacagctgttgactgaacccgaacaacgagcggcg
acaggatgtggtagcccagaaattcaaagaacggcgcaacccgatttggaaatggcgctt
cagctgctcgagaaacacgcgtccaagataaatccgttaaaggcgctggaagttttaccg
gatacagttcctataggtaggataaaacactttttggaagtgagcttgcaggagaaattg
aacgcgaggaggcggatacaagtattgaagggtttgctgtgcgccgaacacttgcaagtg
caggagcagcgtatgcattacgaatcgcagagcgttctcatgacggagtttaatatatgc
ccagtgtgcaagaaacgatttggcaatcaaagcgcgttcgcgagatatccaaacggcgag
attgtccattattcgtgccaggatcgcaagggataa
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