Ceratina calcarata (carpenter bee): 108626809
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Entry
108626809 CDS
T06061
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM71-like isoform X1
KO
K12035
tripartite motif-containing protein 71 [EC:
2.3.2.27
]
Organism
ccal
Ceratina calcarata (carpenter bee)
Brite
KEGG Orthology (KO) [BR:
ccal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccal03019
]
108626809
04121 Ubiquitin system [BR:
ccal04121
]
108626809
Enzymes [BR:
ccal01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108626809
Messenger RNA biogenesis [BR:
ccal03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
108626809
Ubiquitin system [BR:
ccal04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
108626809
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NHL
DUF5128
SGL
zf-B_box
FapA
ANCHR-like_BBOX
Motif
Other DBs
NCBI-GeneID:
108626809
NCBI-ProteinID:
XP_017883179
UniProt:
A0AAJ7S402
LinkDB
All DBs
Position
Unknown
AA seq
691 aa
AA seq
DB search
MYHGQGIDVGASYFRNNLEQNQQVERSIVPYQMFNQMYSRYSNASSPGTSRSSRNSQSNF
QSPNELDFNSVVKSLVEAVDNDYFNIPHFDGISQMEQHMSCGIADCDVCTHTQYYRTFQF
GPQGEYLRGIYPNLLNSPNSPLRQLPIPCGTHPNVAQMYCYTCSKCYCDKCNVTHQTHVT
VPFTMAMKEAKGRAREALKKVREKHVEIEQKINRVQSATDMLDQKSKQANTDVIFGIRRI
TTLLKTREKELLTQIETMKREKLAALEQKQERLKSGILRLTMIRNKLSDTLQSSPHSNPL
NFVAMKDAAMAEMMKIRQEFQHLSNQGKNCCISFRCSEETLLSALENFGRVIQKVPGAIG
DRRALRGRGNSQVFIGRPLASPPMPAEPLSTFDNTFPVTVHLNGNYDVPLTASVIIGNDG
DPENRLCRPWGIACDKSGYIIIADRSNNRIQIYTQNGSFVRRFGVHGTGPGQFDRPAGVA
VDARRRIIVADKDNHRIQILTMEGFFLMAFGEKGNRCGQFNYPWDVAVNSQCQIIVSDTR
NHRVQLFSGDGIFLRKYGYENLPNMWKHFDSPRGVAFNIDGNIITTDFNNHKLLTIDYKF
AHARVFPCESPSSGKLFLRPQGIAIDGIGNVIVADSRNHRIQIFDRKGNLKCRFGSLGAE
ANEMDRPSGVALCPDGRIAVVDFGNNRVLIF
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atgtatcatggacaaggcatcgatgtcggagcgagttacttcagaaacaatcttgaacaa
aatcagcaggtggaacgttctattgtaccctaccaaatgttcaatcaaatgtactcccgt
tattcgaatgcgagctcgccaggaacctcgaggagcagcaggaactcccaaagcaacttt
caatctcccaacgaattggacttcaactcagtggtaaaatctctagtcgaggccgtggat
aacgactatttcaacattccgcattttgatgggatttcacagatggaacagcacatgtct
tgcgggattgcagactgcgatgtttgtactcatacccagtactatcgaaccttccagttc
ggcccccaaggtgaatacctccgaggcatctaccccaaccttctgaactcaccaaattcg
cctcttagacaactacccattccctgcggaacacatcctaatgttgcacagatgtactgt
tatacttgtagtaagtgttattgcgataaatgcaatgtcactcaccagacacacgtcaca
gtgccttttacaatggccatgaaagaagcaaagggccgagcgagagaagccttaaaaaaa
gtcagagagaaacatgttgaaattgaacaaaagataaacagggtacagagcgcgactgat
atgttagaccagaaatctaaacaagccaacacggacgtgatcttcggcataaggagaatc
accacgcttttgaagactagagaaaaagagctgttgactcaaatcgaaactatgaaacgt
gagaaattggctgcgttggaacagaagcaggaaagactcaaaagtggaattcttcgtctt
accatgatccgtaacaaactcagtgacactctacagtcgtctccacacagcaatcctttg
aacttcgtagccatgaaagacgcagcaatggccgagatgatgaaaattcgtcaagagttc
cagcatctctctaatcaagggaagaactgctgtatctcttttagatgttcggaggaaact
ctgctgagcgctttagaaaacttcggcagggtgattcaaaaagttccaggtgctatagga
gatcgaagggctttaaggggccgtggcaattctcaagtgttcatcggacgtccactcgcg
agccctccaatgccggcggaaccactaagcaccttcgataacacttttcctgtgactgtc
catttaaatgggaactatgacgtaccgttaacagcatcagtgataatcggtaacgacggc
gaccccgagaacagattatgccgaccgtggggaatcgcctgtgacaaatctgggtatata
atcatcgcagataggtcgaataatcgtattcaaatttatacacaaaatggaagtttcgta
agaagatttggcgtccatggtacaggtccaggtcagtttgacagaccagctggagttgca
gtagacgcccgccgacgtatcatcgttgctgacaaggacaaccaccgtatacagatattg
accatggagggattctttctaatggctttcggagaaaaaggcaaccggtgcggtcagttt
aattacccttgggacgtggcggtgaacagtcaatgccaaataatcgtgtctgacaccagg
aaccaccgggtgcaacttttcagtggcgatggcatttttctccgaaaatatggttacgag
aatcttcctaacatgtggaaacactttgactctccacgcggcgtggcatttaatatagat
ggtaacataatcacgacggactttaacaatcataaattgcttacaattgactataagttc
gcacacgctcgagtattcccatgcgagtctcccagttccgggaaattgtttctgagaccg
cagggtatagcaatagacggcattggtaacgtcattgttgccgattcgaggaaccatagg
attcaaattttcgacagaaagggcaacctgaaatgtagattcggcagtctcggagcagag
gccaatgagatggaccgtccgtctggagtcgcgttatgtcccgacggtcgaatcgcggta
gttgacttcggtaataatcgagttctcattttttaa
DBGET
integrated database retrieval system
