Ceratina calcarata (carpenter bee): 108626859
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Entry
108626859 CDS
T06061
Name
(RefSeq) CCR4-NOT transcription complex subunit 3 isoform X1
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
ccal
Ceratina calcarata (carpenter bee)
Pathway
ccal03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ccal00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
108626859
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccal03019
]
108626859
Messenger RNA biogenesis [BR:
ccal03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
108626859
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
108626859
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
Baculo_PEP_C
V-SNARE
DUF2748
Spectrin_Anc-1
Motif
Other DBs
NCBI-GeneID:
108626859
NCBI-ProteinID:
XP_017883275
UniProt:
A0AAJ7J2R3
LinkDB
All DBs
Position
Unknown
AA seq
718 aa
AA seq
DB search
MDNTHFKDLFSSHLKYNHAYHCKNSIQSTYLPLLSFGIQIFKCEIDRCLKKVTEGVETFE
DIWQKVHNATNSNQKEKYEADLKKEIKKLQRLRDQIKTWLASGEIKDKSTLLEYRKLIET
QMERFKVVERETKTKAYSKEGLGAAQKLDPAQKEREEVSNWLANSIDSLNLQLDTFESEI
ESLLAGKKKRLDKDKQDRMDELKTKLDKHRYHIRKLETLLRMLDNMSVEVNTIKRIKDDV
EYYIESSQEPDFEENEYIYDDIIGLDEVELSGVGIPSSATTDSNNSNETGGTPTSTNSGT
SPIPSPPLSSTMHNHSSDSSTDNDKKTKPVKPTAVRPLLNSQASIPTTGSTATIKSNLLS
SSTPSKTIPITPSHSSPSSTSNHIATTNAGNFATIAASHSNSQAIHSTSSKTSSHSSENG
LLSSSSTSSVTSNVPQTISQQHNNPAPIQTTHVLHNQQNQNHNSETEMTTPIPPSSSPQS
SVSSRSSPLPANSCSPAPSTANGLIPKLPDGMSSLKSIAQQVIVRAGLEIPPSESNRNIF
DSGKANNNNNNATSEAHIPPLLGVAPLGPVPLQKEHQLQFQMMEAAYYHMPHPSDSERLR
SYLPRNLCPTPPYYQQVQLPHSDTVEFFQRLSTETLFFIFYYMEGSKGQYLAAKALKKQS
WRFHTKYMMWFQRHEEPKVINEEYEQGTYIYFDYEKWGQRKKEGFTFEYKYLEDRDLN
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atggataatacacattttaaagatttattttcgtctcatttgaaatataatcatgcttac
cattgcaaaaatagtattcaatcaacttatctgcctctgctaagttttggaattcagata
tttaaatgtgaaatagatcggtgccttaaaaaagtgactgagggagtagagacgtttgag
gatatttggcaaaaggttcacaatgctacaaatagcaatcaaaaggagaagtatgaagca
gaccttaagaaggaaatcaagaagcttcaaaggttacgtgatcaaatcaaaacctggctc
gcatcaggcgagattaaggataaaagcacgcttcttgaatacaggaagctaatcgagact
caaatggaaaggtttaaagtcgtagagagggaaacgaaaacgaaagcttattcgaaggaa
ggattaggagcagctcaaaaactcgatccagctcagaaggaaagagaagaagttagcaat
tggctcgcaaattccatagattctttgaatcttcagctggacacgtttgagtccgaaata
gaatcgttactcgcaggaaagaagaaaagattagataaagataagcaggatagaatggac
gagttgaaaacaaagcttgataaacatcgttatcatatccgtaaacttgaaacactgttg
cgcatgctggacaatatgtctgttgaagttaacactatcaagaggataaaagatgatgta
gagtattatatcgagtcctcacaggaacctgatttcgaagaaaacgaatatatttacgat
gatattattggtctcgatgaagtagaactgtctggagtcggtattccgtcgtcagcgact
acggacagtaacaatagcaatgagactggaggtacaccaacctcaaccaattctggtact
tcgcctataccgtcacctcctttgagttccaccatgcacaaccattcaagtgatagttct
acagataatgacaagaaaacgaagcctgtgaaacccacagcagtcaggccgttactaaat
tcacaggcgagcattccaacaacgggaagcactgccaccataaaatcgaatttgttgtcg
agcagcactccgagcaaaaccattcccataacacctagccatagctcgcctagttctacg
agtaatcacatcgcaacaacaaatgccggcaacttcgccacaatagctgcttcgcatagt
aattctcaagccatccattctacctctagtaagacatcttctcatagcagcgaaaacggt
ttgttgtcatcgtcgtctacatccagcgttacttcgaacgtgccacaaacgatctcgcaa
cagcataataatccggcgccgatacagacgacgcatgtgttgcataaccaacagaatcag
aatcacaatagcgaaactgaaatgacaacgccgatcccaccatcttcgtcgccgcagtcg
tcagttagcagtaggtcttcacctctgcctgcaaattcctgttcgccagcgccatccact
gccaatggtctcatccctaagcttcctgatggcatgtcctctttgaaatctatagcccaa
caagtaattgtccgagcaggtctggaaataccgccgtccgagtcgaacagaaacatcttc
gacagtggtaaggcgaataataacaacaacaatgccacgtcggaagcacacattcctccg
cttctcggtgtcgcgccactcggaccggtgccgcttcaaaaagagcatcagctacagttc
cagatgatggaggctgcttactaccatatgcctcatccatctgactctgaacgtttgagg
tcgtatttaccaagaaatttatgcccgacgcctccttactatcagcaggttcaacttcct
cattctgatactgtggagttcttccaacgtctttctaccgaaacgttattcttcatattt
tattatatggaaggttccaagggccagtacctggctgcgaaagccctgaaaaagcaaagt
tggaggtttcacacgaagtacatgatgtggtttcaaaggcacgaggaaccgaaagtgatc
aacgaggaatatgagcagggaacgtacatttattttgattacgaaaaatggggacagagg
aaaaaggaaggttttacgtttgagtacaagtacttagaagacagagatctgaattaa
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