Ceratina calcarata (carpenter bee): 108627262
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Entry
108627262 CDS
T06061
Name
(RefSeq) replication factor C subunit 2-like
KO
K10755
replication factor C subunit 2/4
Organism
ccal
Ceratina calcarata (carpenter bee)
Pathway
ccal03030
DNA replication
ccal03410
Base excision repair
ccal03420
Nucleotide excision repair
ccal03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ccal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
108627262
03410 Base excision repair
108627262
03420 Nucleotide excision repair
108627262
03430 Mismatch repair
108627262
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ccal03032
]
108627262
03036 Chromosome and associated proteins [BR:
ccal03036
]
108627262
03400 DNA repair and recombination proteins [BR:
ccal03400
]
108627262
DNA replication proteins [BR:
ccal03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
108627262
DNA Replication Termination Factors
ELG1-RFC complex
108627262
Chromosome and associated proteins [BR:
ccal03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
108627262
DNA repair and recombination proteins [BR:
ccal03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
108627262
Check point factors
HRAD17(Rad24)-RFC complex
108627262
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
DNA_pol3_delta2
AAA_22
AAA_14
AAA_16
RCF1-5-like_lid
Mg_chelatase
AAA_lid_RFC1
Rad17
nSTAND_NTPase5
RuvB_N
AAA_18
Viral_helicase1
AAA_11
nSTAND3
AAA_19
AAA_24
AAA_assoc_2
NTPase_1
AAA_5
ABC_tran
MipZ
MeaB
AAA_28
DNAX_ATPase_lid
AAA_25
RNA_helicase
DUF851
AAA_2
CbiA
IstB_IS21
AAA_29
AAA_3
Motif
Other DBs
NCBI-GeneID:
108627262
NCBI-ProteinID:
XP_017883927
UniProt:
A0AAJ7J4H2
LinkDB
All DBs
Position
Unknown
AA seq
296 aa
AA seq
DB search
MGIENGDNNLMDIEICPSTSGKDNRSKADDRKSLHLPWIEKYRPQVFSDIVGNEDTVQRL
SVFAKNGNCPNIIIAGPPGVGKTTTVLCLARILLGPVFKDAVLELNASNDRGIDVVRNKI
KMFAQKKVNLPSGKHKIIILDEADSMTEGAQQALRRTMEIYSNTTRFALACNNSEKIIEP
IQSRCAMLRYGKLSDAQILAKVIEVCKAENASYTDDGLEAIVFTAQGDMRQAMNNLQSTH
NGFGHINSANVFKVCDEPHPLLVKEMLEHCIERNICKAYRVSTIYQFLKLLCRSSV
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atggggattgaaaacggtgacaataatttgatggatattgaaatttgtccgtcgaccagt
ggaaaggacaacagaagcaaggcagatgatagaaaatcgttgcatttaccatggattgaa
aaataccgaccacaggtgttctcagacattgttggaaatgaggacacagtgcagagactc
tcagttttcgctaaaaatgggaactgtcctaatatcatcattgccggaccaccaggagtt
ggcaaaacaacaaccgtactatgtttggcacgaattttgctcggtccagttttcaaagat
gcagtattagaattaaatgcctctaatgatcgaggaatagatgttgttaggaacaagatt
aaaatgtttgcccagaaaaaggtaaatctaccaagtggaaagcataagataataatttta
gatgaagctgatagtatgacagaaggggctcaacaagcgttacgtaggacaatggaaatt
tacagcaataccacaagattcgcattggcttgtaacaatagtgagaaaattattgagcct
attcaatcacgttgcgcgatgcttagatatggaaaattatcggatgcacaaattttggca
aaagtcatcgaagtttgcaaggcagaaaatgcttcctataccgacgacggtttagaggcc
atagtgttcactgcccagggtgatatgaggcaagcaatgaacaatttacagtccacacac
aatggctttggccatataaacagtgcaaacgttttcaaagtatgcgatgaaccacacccg
ttattagttaaggaaatgctcgaacattgtatagaaagaaatatatgtaaagcttatagg
gtaagcacaatttatcaatttcttaaactcttgtgtaggtcaagcgtataa
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integrated database retrieval system
