Ceratina calcarata (carpenter bee): 108627356
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Entry
108627356 CDS
T06061
Name
(RefSeq) structural maintenance of chromosomes protein 5
KO
K22803
structural maintenance of chromosomes protein 5
Organism
ccal
Ceratina calcarata (carpenter bee)
Brite
KEGG Orthology (KO) [BR:
ccal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccal03400
]
108627356
DNA repair and recombination proteins [BR:
ccal03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
108627356
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_15
AAA_21
SMC_hinge
AAA_29
AAA_13
AAA_27
ABC_tran
Nuf2_DHR10-like
Motif
Other DBs
NCBI-GeneID:
108627356
NCBI-ProteinID:
XP_017884045
UniProt:
A0AAJ7N9B0
LinkDB
All DBs
Position
Unknown
AA seq
1048 aa
AA seq
DB search
MADGCVDTGMITHIYLENFVTYSKVSVKPGRYLNVIIGPNGTGKSTIVCAIVLGLGGKPS
TIGRATQIGHYVKYGCQEATIEIHLKNKKQNDNIIRRVFNKQGKSSWFLNKKPSNIKEIQ
ELTTSLDIQVDNLCQFLPQDKVQDFSKMNPQELLENTERSVGDPVILEHHKRLIQSRVDH
KELEKHIEVKKKALETQTQVYESLKETVDSIKEKKLIKKKITALKQKKAWILYEQKRKEL
LKLKKKKVAATSELKRMEEEIKPFEDVIEKLKSKVELLKSSVSNHNNKLKTETAKLANMI
NDIADCDSAIIDRENVCKKRIQMEETRDRDIKVAEQSKSKLDNDLLLMLEETGSEESLAA
KQQEILSKIEDKNGTITMLTKKMTMLKRQEQRTDFEIEAQQSEQQRLSVEAKRLKLLREK
SSDTYRAVHWLRENRDKFCSTIHEPILLNLNVKDAKYAKYLENVLPYRDLIAFVCEDKRD
MNNLLNYLRTGQNLQVNVVYSDPTKHVSTEPNIPLRHIVQFGFTHYLVSLIEAPSTILKY
LVNMYNLSNIPIGTAQVDDNTENIPTSLHLYFSQSNVYSVKTSKYTGVRSVTMQPISTTG
MLSAVLDRSKLLHIEESLRSLRETKANVLNEIQKINEEMREHNNELDKYKTEKNEHQQDL
QQIQVLKSRISVMKKKIADLQNARTSIEKIQESSREDIKLILEKEFKIYKEYNAVLKQCF
KYTTTSEQAELTINMHKRLLRVKGNELQDMRGKLKEAEDYVRRLSQEAQPMKSEAERLYK
DALETTHNITPSDKAFEQINKIFTKLPPTIEEINKELNIAQAKVFCLGNSGDGENILQQY
EEVEENIGHLKDFIQRKTNEYATLTQDIKSLQEQWLTALSAIVEKINSNFGMYFSAMGCA
GEVTLAVPENNVDFERYGLKIMVKFRDTDKLQELTRHHQSGGERAVTTAIYMISLQELSR
VPFRCVDEINQGMDATNERRVFNLLVKMTGRPNSPQYFLLTPKLLPNLEYAETVTVHCVY
NGPFMIAHEAFDTEQYCRRLIKEKEKEI
NT seq
3147 nt
NT seq
+upstream
nt +downstream
nt
atggctgatggttgcgttgatacaggaatgattactcatatttatttggaaaatttcgta
acttacagcaaagtttctgtaaagcctggcagatacttgaacgttattatcggaccaaat
ggcactggtaaatcaacaattgtttgtgctattgtacttggattgggaggtaaacctagc
accattggccgtgcaactcagatcgggcattatgtgaaatatggatgccaggaagcgaca
attgaaattcatctgaaaaacaaaaagcagaatgataacattattcgtagagtatttaat
aagcaagggaaatcttcatggttcctcaataaaaaaccttcgaatataaaggaaatacaa
gagttaacgacaagtttggatatccaggtggataatctctgtcaattcctaccgcaagac
aaagtacaagacttttcaaaaatgaatcctcaggaattattggaaaacacagaaagatcg
gttggggatcctgtgattttggaacaccataaaaggttgatacagtccagagtggatcac
aaagagcttgaaaaacatattgaagtaaagaagaaagcgttggaaacgcaaactcaagta
tacgaaagtttgaaggaaactgttgacagtataaaagagaaaaaattaataaagaaaaag
attaccgctttgaagcaaaagaaagcatggatattgtatgagcagaaacgaaaagaacta
cttaagttgaaaaagaaaaaagtggctgctacgtctgaactgaaacgtatggaagaggaa
ataaaaccttttgaagacgtaatagagaaattaaaatcgaaagttgaactacttaaaagc
tctgtttcgaatcataataataaactgaagaccgaaactgcaaaactggcgaacatgata
aacgatattgctgactgtgacagcgctataatagatcgggaaaacgtgtgcaagaaaaga
attcaaatggaagaaactcgggatcgggacattaaagttgcggaacagtcaaaaagcaag
cttgataacgatttattgctgatgttagaagaaactggatctgaggaaagtttggcagcg
aagcaacaagagatattatccaagatcgaggataagaatggtactattacgatgctaaca
aaaaaaatgacgatgttaaaacgacaagaacaacgaacggattttgaaatcgaagcacaa
caatcggagcaacaacgtcttagcgtcgaagcgaaacgacttaaattgttgagggagaaa
agtagcgacacatacagggcggtacattggctgagagagaaccgtgacaagttttgtagt
acgattcacgagccgatattgcttaacttgaacgtaaaggacgccaagtacgcaaaatat
ttggagaacgtacttccgtaccgtgatttaatagcattcgtttgtgaagacaaacgagat
atgaacaacttattgaactatttaagaactggacagaacttacaagtgaacgttgtatat
tctgaccccacgaaacacgtttccacagagccgaatattccgctgcggcacatcgtgcaa
ttcggttttactcattacttggtatctttgatagaagcaccgagcactattttgaaatat
ttagtcaacatgtataatttgtctaacatacccatcggaacggcacaagttgacgataat
accgagaatatacctaccagtttacatctttatttcagtcagagcaacgtgtattccgta
aagacatcgaaatatacaggagtaagatctgtcacgatgcagccaatatcgactacggga
atgttatctgctgtgttagacagatcgaaactgttacatatcgaagaaagtttgaggtca
ttgcgagagacgaaggccaatgtactgaatgagatccaaaagatcaacgaagaaatgcgt
gagcataacaacgaattggacaagtacaagactgaaaaaaatgaacatcagcaagatctt
cagcagatacaggtcctaaaatctaggatatctgtaatgaagaaaaagattgccgattta
caaaacgcgagaacgagcatcgagaaaatacaggaatcttcgagggaggacataaagttg
attctggagaaagaattcaagatttataaagagtataatgccgtattgaaacaatgtttc
aaatatacgacgaccagtgaacaggcggaattaacgataaacatgcataaacgattgttg
agggtgaaaggtaacgagttgcaagatatgagaggaaaacttaaagaggcggaagattat
gtcaggcgacttagtcaggaggcgcaaccgatgaagagcgaggcagaaaggctttataaa
gatgcattggaaactactcataatatcactccttccgataaagcattcgaacagataaat
aaaatatttactaaattaccaccgaccatcgaagagattaataaggagttgaatattgcg
caagcaaaagtattttgtttgggaaacagcggagatggtgaaaatatattacaacaatac
gaagaagtcgaagaaaatataggtcatttgaaggatttcattcaaagaaaaacgaatgag
tatgcaacgttgacgcaagatattaaaagtttgcaggagcaatggttgacagcgttatcg
gcaatagttgagaaaattaattcaaatttcggcatgtatttctcggcaatgggctgcgcc
ggtgaagttacgttggccgtaccggagaacaacgtggatttcgagcgatacgggctcaaa
ataatggtgaaattccgagatactgataagctgcaggaattgacgaggcaccatcaaagt
ggcggagaaagagcagtgaccactgccatttacatgatatcgctacaagaattgtcgaga
gtaccttttcgatgcgtcgatgaaattaatcaaggcatggatgcgacaaatgaaagaaga
gtgttcaatctactcgtgaaaatgactggtagacccaatagtcctcagtattttttactt
acgccgaagttattacccaatttggaatatgcggagacagttacggtgcattgtgtatac
aacggaccattcatgattgcgcatgaagcgtttgatacagaacagtattgtagacgtctt
atcaaggagaaagagaaggaaatttaa
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integrated database retrieval system
