Ceratina calcarata (carpenter bee): 108627423
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Entry
108627423 CDS
T06061
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 1-like
KO
K05034
solute carrier family 6 (neurotransmitter transporter, GABA) member 1
Organism
ccal
Ceratina calcarata (carpenter bee)
Pathway
ccal04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
ccal00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
108627423
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ccal02000
]
108627423
Transporters [BR:
ccal02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
108627423
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Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
108627423
NCBI-ProteinID:
XP_017884157
UniProt:
A0AAJ7N9E1
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Position
Unknown
AA seq
645 aa
AA seq
DB search
MAEKMYYWGEEKDQVDPEQTFIEFKAKSGRKRESTRPAPKTIVSTMQDREGGTIENREED
TERGGWDNKLDFLFSCISVSVGLGNVWRFPYLCYKNGGGAFLITYGIAMLFCGIPIFFQE
VAIGQYLGAGGMTLVGQLCPLLQGVGYATMTIVFFLDVYYCIIIAWTLFYLISTFVNIPS
VPWKGCGNWWNTEDCYDGLVKIEKTNNTNSTYNSTEPHHTTPVEEYWERRVLGVTSGIES
IGGIQWELLGCLIVGWLLVYSIIRRGLHQSGKIIWFSALFPYVVLFILLGRAVTLEGSYR
GLLYYVTPRWEELLSPGPWIDGATQIFFAYSIGTGALPALGSYNKFHHNCYKDAIITCVV
NTLTCLLAGCVTFSILGHIASEQGTEVSEVVKSGPGLVFLTYPEVVLKLPGASMWAIIFF
VMLLILGIDSEFCIVESFITGVVDNWPDLLRPHRKKFTIAICCLMFALGLPMVTNGGVYI
FQLMDFYSASGMSILWVCFFQTIAISWIFGAKKFCDCIHQMMGVRLNKFWYVCWVVFAPV
IMAFIFVFQCVQYTPLKYGSNYEYPAWAEVVGFCLSLSSMIWIPGYALYYVIVTPGSIKE
NLVKGLQPNIKSQPKLPKGEKSAVIPMSESSAGLITKNNSFLSQT
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atggcagagaagatgtactactggggagaggagaaggatcaggtcgatccggaacaaact
ttcatagaatttaaagcgaagtctggtaggaaaagggaatcaactcgtcctgcaccgaag
acgatcgtttcaacgatgcaggaccgagagggaggcaccatcgagaatcgggaggaagac
acggagcgtggtggatgggacaacaaattagacttcttattctcgtgtattagtgtatcc
gtgggacttggaaacgtctggaggtttccctacttgtgttacaaaaatggcggaggtgcc
ttcctcatcacgtatgggatcgccatgttgttttgcggtattcctatattcttccaagaa
gtggctattgggcagtacctcggcgccggagggatgaccctcgtaggacaattgtgcccc
ttgttacaaggcgtcggatacgctacaatgacgatcgttttcttcctggacgtgtattac
tgcatcatcatcgcttggacacttttttatctgataagcaccttcgtcaacatacccagc
gtgccctggaagggttgcggcaattggtggaacaccgaggactgttacgacggcctcgtt
aaaatcgagaaaacgaacaatactaattcgacgtacaatagtaccgagccccaccatact
acgccagtcgaggaatactgggagaggcgagtcctgggggtgacttccggtatcgaaagc
atcggggggattcaatgggagctgctaggctgcctgatcgtcggctggctcctcgtttac
tctatcatccgtcgcggcctccatcagagcggtaagatcatctggttttcagccttgttc
ccctacgtggtgcttttcattcttttgggaagagcggtgacgctagagggcagctatcga
ggattgttgtactacgtaacgcccagatgggaagaattgttatcgcccggaccgtggatc
gacggggctacgcaaattttctttgcctacagcatcgggaccggggccctgcccgccctc
ggctcgtacaacaagttccatcacaattgttacaaagacgccataatcacttgcgtggtg
aacacgttgacctgcctgctagcaggctgcgtgacgttctccattcttggtcacatcgcc
tctgaacaaggcaccgaagtgtccgaagtggtgaaaagtggtccaggactcgtattcctc
acatatccagaagtagtcctaaaactccctggggcttcgatgtgggcaatcattttcttc
gtcatgttactaatacttgggatcgacagtgaattctgcatcgtcgagtccttcattacc
ggcgtggtcgataattggccagacctgcttcgtccccatcgaaagaaattcaccatcgct
atttgctgtctgatgttcgccttgggcctgcccatggtgaccaacggcggggtctacata
ttccaattaatggacttctactcggcgagcggcatgtcgatcctctgggtctgtttcttc
caaacgatcgcgatatcgtggatattcggtgcgaagaagttctgcgattgcatccaccag
atgatgggcgtgcggctgaataaattctggtacgtttgctgggtagtcttcgcgccggtc
atcatggcgtttatattcgtgtttcaatgtgtgcaatacacgccactgaaatacgggagt
aattacgagtacccagcatgggcagaagtggttgggttttgcctaagtttatcatcgatg
atctggatacccggctacgctctctattacgttatcgtcactccaggatccattaaagag
aaccttgtgaaaggtctgcagccgaacataaagtcgcaaccgaagctaccgaaaggcgag
aagtccgcagtgataccaatgtctgaaagcagtgcaggattgatcactaagaacaacagt
ttcctgagtcaaacatga
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