Ceratina calcarata (carpenter bee): 108627486
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Entry
108627486 CDS
T06061
Name
(RefSeq) homeobox protein SIX3-like
KO
K19473
homeobox protein SIX3/6
Organism
ccal
Ceratina calcarata (carpenter bee)
Brite
KEGG Orthology (KO) [BR:
ccal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccal03000
]
108627486
Transcription factors [BR:
ccal03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain SINE
108627486
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SIX1_SD
Homeodomain
Homeobox_KN
HTH_3
Motif
Other DBs
NCBI-GeneID:
108627486
NCBI-ProteinID:
XP_017884279
UniProt:
A0AAJ7J453
LinkDB
All DBs
Position
Unknown
AA seq
477 aa
AA seq
DB search
MSAVVPAGTGAGAPTASGPIVPAPVFALPTLSFTVGQVATVCETLEESGDIERLARFLWS
LPVAHPNIQELNQSEAVLRARAIVAFHSGHYRELYAILERHKFTKDSHGKLQAMWLEAHY
QEAEKLRGRPLGPVDKYRVRKKFPLPRTIWDGEQKTHCFKERTRSLLREWYLQDPYPNPG
KKRELAAATGLTPTQVGNWFKNRRQRDRAAAAKNRMQQQSGTGNGNARRTLSPGPGGSDS
EDSDISLGGTSPPSPSSSPPPTHQPSPVPLGALGPLPPPTLNFRFDPSQSQFRFNHATAF
KFPPAAFRFAPHSPQHNHPNISGGGIFRLAETSPFQAVGPRGDLGSRLPDTLALPPPPRI
HPHDGLLPHPHVQHQLPDGMSRIGSDGSRMSDGGISRLSDSLSEAHSPPLMATNLSVTGP
LRVAVPSPHTPSSRGSPSASQQTPQGQSQEQQGLIRVATPPAPNPKPPQIHRPFSPA
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgtcagccgtagtgccagcaggaacaggcgccggggcgcccaccgcgagtgggcccatc
gtacctgctccggttttcgcgttaccaactctgtcgttcaccgtcggtcaggtggccacc
gtttgcgagaccctggaggagagcggagacatcgagagactggcaaggttcctctggagc
ctgccggtagcgcatccgaacattcaagagttgaatcaaagcgaggcagttctcagagct
agagcgatcgtcgctttccactcgggacactacagggaattgtacgcgattctggagagg
cataagttcaccaaggactctcacggtaaactgcaagcgatgtggctcgaagcacactat
caggaagcggaaaagcttcgcggaagaccgcttggacccgtcgacaagtacagagtgagg
aagaaattcccgttgccgaggactatctgggacggcgagcagaagactcattgtttcaaa
gagcgaacccgatcgttgttgagagagtggtatcttcaagatccgtacccgaatccgggg
aagaaaagggaattggccgctgccacaggactcacgcctactcaagttggaaattggttc
aagaacagaagacagagggatcgagcggctgcagcaaagaacagaatgcaacaacaatct
ggtacaggaaacgggaatgcgcgtcgcacgctgagtccggggccagggggtagcgactcg
gaggattctgatatatctctgggtggaacatcgccaccgtctccaagttcttcgccacca
ccgactcaccaaccgtctcccgttcctctcggggccttgggtcccctgccaccgcccacg
ttgaatttccgtttcgatccatcgcaatcgcagtttcgatttaaccacgcgacggccttc
aaattcccgccggccgccttccggtttgcaccacacagtccgcaacacaatcatccgaac
atctcgggcggtggaatcttcaggctggcggaaacgagcccgttccaagctgtaggaccc
aggggagatcttgggtcacgattaccggatacattagcactaccgccgccaccgaggatc
caccctcacgacgggttgctgccccatccacatgtgcagcatcagttaccggatggaatg
tcgaggataggatcggatggttcgcggatgtccgatggcggaatatcgcggttgtcggac
agcctatcggaagcgcacagcccaccattgatggctacgaacctgtcggtgacgggtcca
ctgagggtcgcggtcccgagtccgcacacgccctcctcgcggggcagtccgtcggctagt
caacagactcctcagggtcagtctcaggaacagcagggattgataagggtcgcgacgcca
ccagcgccgaatccgaaaccaccccagatccaccgacccttctcgccggcgtga
DBGET
integrated database retrieval system