Ceratina calcarata (carpenter bee): 108627564
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Entry
108627564 CDS
T06061
Name
(RefSeq) retinoblastoma-binding protein 5 homolog
KO
K14961
COMPASS component SWD1
Organism
ccal
Ceratina calcarata (carpenter bee)
Brite
KEGG Orthology (KO) [BR:
ccal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ccal03036
]
108627564
Chromosome and associated proteins [BR:
ccal03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
COMPASS/SET1 complex
108627564
COMPASS/SET1 complex (yeast)
108627564
MLL-HCF complex
108627564
MLL3/MLL4 complex
108627564
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_Prp19
WD40_CDC20-Fz
WD40
Beta-prop_EML
Beta-prop_TEP1_2nd
WDR55
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
Beta-prop_IFT140_1st
EIF3I
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_SCAP
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
Beta-prop_HPS5
Beta-prop_IFT122_1st
Beta-prop_WDR75_2nd
Beta-prop_Vps41
Beta-prop_SPT8
WD40_RFWD3
Beta-prop_LRRK2
WDR54
Beta-prop_NUP159_NUP214
Frtz
Beta-prop_WDR11_1st
WD_LRWD1
Beta-prop_WDR75_1st
Beta-prop_RIG_1st
Beta-prop_EIPR1
Beta-prop_TEP1_C
Motif
Other DBs
NCBI-GeneID:
108627564
NCBI-ProteinID:
XP_017884361
UniProt:
A0AAJ7NA25
LinkDB
All DBs
Position
Unknown
AA seq
465 aa
AA seq
DB search
MNLELLESFGQNYPEEFDGTLDCISLAVTCTFNKRGTLLAVGCNDGRIVIWDFLTRGVAK
LISAHVHPVCSLSWSRNGHKLLSASTDNNVCIWDVLSGECDQKYRFPSPILKVQFHPRNL
NKFLVCPMRHAAVMVDVEGSHRVIPLDDDSDLNIVASFDRRGDYVYTGNARGRILVLDAE
SLTVKASYKISQGTASNTAVKSIEFARRGSCFLVNTSDRVIRVYDSTEVLACGKDGEPEP
IQKLQDLVNKTMWKKCCFSGDGEYVCAGSARQHALYVWEKSIGNLVKILHGTKGELLLDV
VWHPVRPIIASISSGVVSIWAQNQVENWSAFAPDFKELDENVEYEERESEFDLSDEDKSV
VQGEEAQDEEIEVDVASIDRVAAFCSSDEEMEDIGSLQFLPISPDVEDSEDNQTTPHEPP
VKKHRSHDIHLQGAPVDETHPLLNKGKDKPTTKKGRPRLEHRKGK
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgaatttagaattattagaatcattcggtcagaattatccagaggaatttgatggtacg
ttagattgcatatcactagcggttacctgtacatttaataaaagaggtaccctccttgct
gttggatgcaacgacggaaggattgttatttgggatttcttaactcgtggtgttgctaaa
ctcattagtgctcatgtacatcctgtctgttcgctgagttggtctagaaatgggcataaa
ttgttaagcgcgtctacagacaataatgtttgtatatgggatgtgctatcaggagaatgt
gatcaaaagtatagatttccgtcgccaatactgaaagtccaattccatccaagaaatctt
aataaattcttagtatgtcctatgagacatgctgcagtaatggttgatgttgaaggttca
cacagagttatacctcttgatgacgatagtgatttaaatatagtagcatctttcgaccgc
agaggagattatgtgtatactggaaatgctcgtggtagaattttagttctcgatgcagaa
tcgttaacagtgaaagcctcttacaaaatatcacaaggcactgctagtaatacagctgtg
aagagtatcgaatttgctagacgcggttcgtgcttcttagtaaacacgtcggacagagta
atccgtgtatacgatagtaccgaagtattggcttgtggcaaggacggcgaacctgaacca
atacaaaagctgcaagatcttgtaaataaaaccatgtggaagaaatgttgtttttccgga
gatggggagtatgtgtgcgctggttctgctaggcaacatgctttgtacgtgtgggaaaag
agcatcgggaatttagttaaaattttgcatggaactaaaggagagttgttgcttgatgtt
gtttggcatccagtaagaccaattattgcttccatatcatccggcgtcgtttccatttgg
gcacaaaatcaagttgaaaattggtctgcgttcgcaccagattttaaagaattggatgaa
aacgtcgaatacgaagaaagggagagcgaattcgatttgagcgatgaagacaagtctgtg
gttcaaggagaagaggctcaagacgaagaaatcgaagtagatgttgcatcgatagataga
gtggctgctttctgtagttctgatgaagaaatggaagatattggttcgctacaattctta
cctatatcgccagacgtagaagattctgaggacaaccaaacgacaccacatgagccacct
gtaaaaaaacatcgttctcatgatatccacttgcagggtgcaccagttgacgagactcat
ccattgttaaataaaggaaaggataagccaacaactaagaaaggaagaccaagattagaa
catagaaagggaaagtaa
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