Ceratina calcarata (carpenter bee): 108627747
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Entry
108627747 CDS
T06061
Name
(RefSeq) vacuolar protein sorting-associated protein 41 homolog isoform X1
KO
K20184
vacuolar protein sorting-associated protein 41
Organism
ccal
Ceratina calcarata (carpenter bee)
Pathway
ccal04140
Autophagy - animal
ccal04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
ccal00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
108627747
04148 Efferocytosis
108627747
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccal04131
]
108627747
Membrane trafficking [BR:
ccal04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
108627747
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_Vps41
Beta-prop_Vps41
Clathrin
WD40_CDC20-Fz
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_HPS5
WD40
TPR_7
zf-RING_5
zf_RING_Vps8_fungal
zf-RING_Vps41
WDR55
TPR_12
TPR_PEP5_VPS11
Vps39_1
Beta-prop_EML_2
Beta-prop_RIG_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
zf-RING_2
TPR_19
zf_RING_Vps8
ANAPC4_WD40
TPR_2
PEP5_VPS11_N
Beta-prop_WDR19_1st
EIF3I
zf-C3HC4_3
zf-C3H2C3
Motif
Other DBs
NCBI-GeneID:
108627747
NCBI-ProteinID:
XP_017884662
UniProt:
A0AAJ7J5K2
LinkDB
All DBs
Position
Unknown
AA seq
851 aa
AA seq
DB search
MENTLHKNNQDDSDSEVDEVEPRLKYVRMRNDLEHILQNDAASCIAVHPKFLCLGSHWGM
IHLLDHQGNNIQSKSLQAHTVAVNQISIDQKGDFIASCSDDGKVFIYGLYSTENNHNMSM
GRLVKSIAIDPNYYKSGSGRRFITGDDKLVLYEKTFLSRMKLTVLCEAEGGVRSVAWIGH
FVAWASDTGVRVYDLNARCSLGLIKWTRSADALPEHYRCNLRWSDDRTLLIGWVDVVRVC
QIRKRSIQEMVNRDLPEYVVDPVSTFQVDFYISGIAPLENQLVLLGCLKETDENGKSQRP
TLHVVEPKYQDFSVVCGNSLTLRGYKEYSCNDYHLDCLIEENRFFIVSPKDVVVASLYDA
DDRIEWLLMHGKFEQALEAVTVNNGKDCKKHTLVNVGRVYLDHLLTCEKYDEAGKLCLKI
LGKDRKLWEEEVYKFARVHQLRSISSYLPRGDVTLDPLIYEMVLYEYLKMDPDGFLQLVK
EWSPKLYKVAAVVNGVLEHLLVHNQQQKPDRTVLLEALAILYIHDGKYDKALAMYLKLRH
KDVFQLIQKYQLYHTVYDMIEGLMDLDAERAIQFFLEKDRVPSDVVVQELQRNQRYLYLY
LDALDKKDSKGKYHGSLVRLYADYSRDKLLPLLRRSDNYPIQEALDICSQRKFFPEMVYL
LGRIGNTSEALALMTRELNDMESAIAFCQEHDDEELWNDLIVYSLDKPKAITFLLQKIGT
YVDPRLMIQSIDPSLEIPGLKKALVKMMCDYNLQVSVQKGCKKILSNDYFNLQERLIKCH
QKGIFIDDDQMCGACHRKIIVREPRNLVVFYCKHSFHEDCLPNFEVVENCVICNSQKDTS
LGGGGGDGGRK
NT seq
2556 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatactttgcacaagaataatcaggatgattcagactcggaagtggatgaggta
gagcccaggcttaaatacgtcaggatgcgaaatgatttggaacacatattgcagaacgat
gccgctagctgcatagcagtgcaccctaagttcctatgtttaggctcgcactggggcatg
atacatcttctggatcatcagggaaacaatatccagtcgaaaagtttgcaagctcacacc
gtcgctgtgaaccagatttccatagaccaaaaaggagatttcatcgcgtcctgcagcgac
gatggaaaggtttttatatatggtctttacagcacagagaacaatcataacatgagcatg
ggtagattggtcaagagcatcgctatagatccaaattattataagagcggcagcggaagg
agatttatcacgggggatgataaattggttttgtatgaaaaaacttttttatccagaatg
aaactaactgtattgtgcgaagcggagggcggggtaaggtcagtggcatggattggacat
ttcgtggcatgggcttccgacactggtgtcagggtgtacgatttgaacgccagatgttcg
ttaggtcttattaaatggaccaggtccgctgatgcgttaccagaacattatagatgtaat
cttcggtggtcggacgacagaacattactaatcggttgggtcgacgtggtacgagtttgt
caaattagaaaaagatcgatacaagaaatggtcaacagagatctgccggagtatgtggta
gacccagtgtcaacgtttcaagtggacttttacatttccggtattgcaccgctggaaaat
caattggtgttactgggttgtttgaaagagacggacgaaaatgggaaaagtcagagaccg
acgttgcatgttgtcgaaccgaagtatcaagatttctctgttgtctgcgggaactctctt
acgttacgtggttacaaagagtatagttgtaacgattatcatttagactgtttgatagaa
gagaacagattctttatcgtaagcccgaaggacgttgttgtggccagtttgtacgatgcg
gatgatagaatcgagtggttattgatgcacggaaaattcgaacaagcgttggaggcagtg
acggtgaacaacggcaaagactgtaagaaacacacattggtgaacgtcggtcgcgtatat
ttagatcatttgttgacttgtgaaaagtacgatgaggcaggaaaattgtgcttgaaaatc
ttagggaaggacaggaaattatgggaagaagaagtatacaagttcgccagggtgcatcaa
ttgcggtcgatctcttcttacttgccgaggggcgatgtaacgttggatccattgatttac
gagatggttctctacgagtatctgaaaatggatcccgacggatttctgcaactggtcaag
gaatggtcgccgaaattgtataaagtcgcagccgtcgtgaacggcgtcttggaacatctc
ctggttcacaatcagcagcagaaaccggatagaacggtgttgttggaagcgttagcgatt
ttgtacattcacgacgggaaatacgacaaagcgttagcgatgtacttgaagctgaggcac
aaagacgtgtttcaactgattcaaaagtaccaattgtaccacaccgtttacgacatgata
gagggtctgatggatctagacgcagaacgagcgatacaattttttctggagaaggacagg
gtgccgtccgatgtcgttgtacaagaactgcaacgtaatcaacgatatttatatttgtat
ttggacgcgttggacaagaaagactcgaaggggaaatatcacgggtcgctggtccgactt
tatgccgattactcacgagacaaattgttaccgcttctacgccgatcggataattatccg
atacaagaggccctagacatatgtagtcagcgaaagttcttcccagaaatggtgtatctg
cttggcagaatcggaaacacgtctgaagctttggcgctcatgaccagggaactgaacgac
atggaaagcgcgatcgcgttctgccaagaacacgacgacgaggaattgtggaacgacctt
atcgtttattcgttggacaaacctaaggcgatcacgtttttactgcagaaaataggcacc
tacgttgatcctagactcatgatacaaagtatagatccatctttagaaatacctggtttg
aagaaagctttggtgaaaatgatgtgcgattacaatcttcaagtgtcggtgcagaaaggt
tgtaagaagatactgtccaatgattattttaatttacaagaaagactcattaaatgtcat
cagaaaggaatatttatagacgacgaccaaatgtgtggagcatgccataggaagataatt
gtacgagagccaagaaatctagttgtattttattgcaaacattcgtttcacgaagattgt
ttaccaaacttcgaagttgtggaaaattgcgttatatgtaattctcagaaggatacgtct
cttggtggtggtggtggtgatggcggcaggaaatga
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integrated database retrieval system
