Ceratina calcarata (carpenter bee): 108627787
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Entry
108627787 CDS
T06061
Name
(RefSeq) probable ATP-dependent RNA helicase DDX46 isoform X2
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
ccal
Ceratina calcarata (carpenter bee)
Pathway
ccal03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ccal00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108627787
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccal03041
]
108627787
Enzymes [BR:
ccal01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
108627787
Spliceosome [BR:
ccal03041
]
Complex A
U2 snRNP components
U2 related factors
108627787
Complex B
108627787
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
KH_12
CdAMP_rec
Motif
Other DBs
NCBI-GeneID:
108627787
NCBI-ProteinID:
XP_017884746
UniProt:
A0AAJ7J5T6
LinkDB
All DBs
Position
Unknown
AA seq
1030 aa
AA seq
DB search
MVRSSDKDRHHRRRSRTRSRSRSTTPEKKRRRSRSRDRDRERDKGRHRERRSRSRDRDRD
RRDRSDRDRDRDRKRGDSKEKRLTGSKSSRSGKDRSNRSRSRERKEKEKGESDELPFDHT
KLDKEEEQKRLELEMQKRRERIERWRAERKKKELEATKKDGKTSILANLQLPMKKWSLED
DSDEETPVVQNSNKEVKEDGEIKEEVEEVKEEVKDDEEEVDPLDAFMAEVQEEVRKVNKL
DNKSAKNTNNGTTTGGTQSGGVVIVTGVAKKKVQKQKGELIEQNQDGLEYSSEEEGENLH
ETAAGIANKQKRELAKVDHATTEYQPFRKSFYVEVPEIARMTSEEVEAYKEELEGIRVKG
KGCPKPIKSWAQCGVTKKELEVLKKLGYEKPTPIQCQAIPAIMSGRDLIGIAKTGSGKTL
AFLLPMFRHILDQPPLADGDGPIALIMTPTRELCMQIGRDSKKFTKSLGLSHVCVYGGTG
ISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVM
RIMENVRPDRQTVLFSATFPRQMEALARRILTRPVEVQVGGRSIVCKDVEQHVVVLEEDQ
KFYKLLEILGHYQDKGSTIIFVDKQENADTLLKDLMKASYSCMSLHGGIDQCDRDSTILD
FKAGRTKLLVATSVAARGLDVKHLVLVVNYDCPNHYEDYVHRCGRTGRAGNKGYAYTFIT
SEQERYAGDILRAHELAGVPVPEPLRQLWEGYKARQAADGKKVHTGGGFSGKGFKFDESE
AALANEKKKFQKAALGLQDSDDEDIENDIDQQIESMLAPKRTVREIARPSAANLAVPGQP
VPSATDKLELARRLASKINIAKNLGAEAKGATQQAAEAILKGAGPTNLITAKTVAEQLAA
KLNTKLNYQPREEDLVESDAETGEQTFRKYEEELEINDFPQQARWRVTSKEALAQISEYS
EAGLTVRGTYIAPGKAPPEGERKLYLAIESTSELAVSKAKAEVSRLIKEELIKLQASGAH
TASRGRYKVL
NT seq
3093 nt
NT seq
+upstream
nt +downstream
nt
atggttcggagtagcgacaaggataggcatcacaggaggcgatcgaggacgcggtcgcga
tcgagatcgaccacgccggagaagaagcgtcgacgatctaggagcagggacagggacagg
gaacgggacaagggtcggcacagagaaaggcgaagtcgttccagagaccgggatagggac
aggagagatcgctccgacagagacagggaccgcgacaggaaacgtggagacagtaaagaa
aagcgtcttacaggctcaaagtcctcgcgttcaggcaaagatcgatcgaacagatcgaga
tcgcgggagaggaaggagaaagagaagggcgagagcgatgaattgccattcgatcacact
aaattggacaaggaggaggaacagaaacgattggaactggaaatgcaaaagagaagagag
aggatagagcggtggcgggcggaacggaaaaagaaagaattggaggcgactaagaaagat
ggtaagacatcgattttagcaaatcttcagctgcccatgaaaaagtggtcgctcgaagac
gacagtgacgaggagactcccgttgttcagaacagcaacaaggaagtgaaagaagatggg
gaaatcaaggaagaggtcgaagaggttaaggaagaagtgaaggacgacgaagaggaggtc
gatcctctagatgcgttcatggcagaggtccaggaagaagttcgaaaggtgaacaagctg
gacaacaagagtgcgaagaacactaacaacggcacgaccaccggtggaactcaaagcggg
ggtgtcgtaatcgtgactggagtggccaagaagaaagtgcagaagcagaagggagagttg
atcgagcagaatcaagatgggctcgagtattcgagcgaggaggaaggggagaatcttcat
gaaacagctgccggtattgcgaacaaacagaaacgcgagttagccaaagttgaccatgcg
acaacggaatatcagccgttcagaaaatcgttctacgtcgaagtacctgagatcgcgaga
atgacgtcggaggaggtggaggcgtacaaagaagaattagaagggattcgcgtgaaaggg
aagggttgcccgaagccaattaaatcgtgggcgcagtgcggcgtcacgaagaaagagttg
gaagtgctgaagaaactcggttacgagaaaccgacgcccattcaatgtcaagccattccc
gcgatcatgtctggccgggatttgataggcatagcgaaaacaggcagtggaaagaccctg
gcgttccttctgccgatgttcaggcatattctggatcaaccaccgctggccgacggtgac
gggccgatcgcgttaatcatgacaccgaccagggagctgtgcatgcagatcgggagagat
tcgaaaaagttcaccaagtctttgggtttatcccacgtttgcgtttatggtggtacaggc
atatcggagcagatagccgaattgaagagaggcgctgagataatcgtgtgcacgccgggc
agaatgatcgacatgttggcggccaacagcggacgagtaacgaatctacgtagagttacg
tacgtcgttctcgacgaggccgacaggatgttcgacatgggtttcgagccgcaagtcatg
cgaatcatggagaacgttcgacccgatcgacagaccgtgctgttcagcgccacgttccca
cggcagatggaagcgttggcgagaagaatcttgaccagacccgtggaagtccaagtcggt
ggacggtccatcgtctgcaaggacgtcgagcaacacgtggtggtgctagaggaggatcag
aagttctataagctgctcgagatcctcggccactatcaagacaaaggttccactataata
ttcgtggataagcaagagaacgcggacacgctgctgaaggatctcatgaaggcttcgtat
tcctgtatgtctctccacggtggtatcgatcagtgcgacagagattcgacgatattagat
ttcaaagcgggaagaacgaagctgttggtcgctacttcagtggctgccagaggcttggac
gtgaagcatctcgtactcgtagtgaattacgattgtccgaatcattacgaagattacgtg
cacagatgcggaaggacaggaagggctgggaataaaggatacgcgtacactttcatcacg
tcggagcaagaacgatacgcgggtgatattctccgagctcacgaactagccggagtgcca
gtgcccgaaccgttgcgtcaactgtgggaagggtacaaagcccggcaggcagcagacggc
aagaaagtccataccgggggtgggttcagtggtaaaggtttcaagtttgacgaatccgaa
gcagcgttagcgaacgagaaaaagaagttccagaaggcagctctcggacttcaggactcc
gacgacgaagatatagaaaatgacatcgatcagcagattgagagtatgttagctccgaag
agaacggttcgcgagatcgccaggccatctgctgcgaacctcgccgtgcccggtcagcca
gtgcccagtgcgacagataaattagaattagctaggcgattagcgtcgaagatcaacata
gcgaagaacctgggagccgaggcgaagggagcgacgcagcaagcggcggaggctatactc
aaaggtgcgggaccaaccaatctcatcacggcgaagacggtcgccgaacagttagctgcg
aagttgaacaccaagttgaactatcaaccgcgcgaagaggatctcgtcgaaagcgacgcg
gagactggggaacagactttccgaaaatacgaagaagaactggagataaacgatttcccg
cagcaggccaggtggagagtcacgagcaaagaagccctcgcacagatctctgagtattcc
gaagctggcctcaccgtcagagggacttacatcgcacctggtaaagctccgccagaaggc
gagaggaagttgtatctcgccatcgaatctaccagcgaactggcggtcagcaaagcaaag
gcagaggtctcgcgattgatcaaagaggaattaatcaagttacaagcttccggggcgcac
acagcgtctcgtggccgatacaaggttttgtaa
DBGET
integrated database retrieval system
