Ceratina calcarata (carpenter bee): 108627807
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Entry
108627807 CDS
T06061
Name
(RefSeq) DNA topoisomerase 3-alpha
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
ccal
Ceratina calcarata (carpenter bee)
Pathway
ccal03440
Homologous recombination
ccal03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ccal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
108627807
03460 Fanconi anemia pathway
108627807
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ccal03032
]
108627807
03400 DNA repair and recombination proteins [BR:
ccal03400
]
108627807
Enzymes [BR:
ccal01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
108627807
DNA replication proteins [BR:
ccal03032
]
Eukaryotic type
DNA Topoisomerases
108627807
DNA repair and recombination proteins [BR:
ccal03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
108627807
FA (Fanconi anemia) pathway
108627807
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_GRF
Toprim
Zn_ribbon_Top1
Zn_ribbon_GRF_2
HVO_2753_ZBP
zf-LITAF-like
Zn_ribbon_recom
Motif
Other DBs
NCBI-GeneID:
108627807
NCBI-ProteinID:
XP_017884787
UniProt:
A0AAJ7J5V6
LinkDB
All DBs
Position
Unknown
AA seq
1035 aa
AA seq
DB search
MLRVIKVFNVVKLNLCKFKQHRYLIVRFKSSVQKMKVLNVAEKNDAAKTIAGFLSRGSSK
RRDGLSPYNKIYEFSVQLWNKNCDMIMTSVSGHLLNYAFVGSYCKWQSCHPLALFDAPVI
KQCPDENGVKIKRTLEREVKQCQALIIWTDCDREGENIGFEVIQVCQAVKQNILIYRAKF
SEITSISVNRALQNLCQPDKAISDAVDVRSELDLRIGAAFTRFQTLRLQQVFPQSLADML
ISYGSCQFPTLGFVVERFLAIERFKPEPYWKLRVTDNRDNISVEFRWARVRLFEKLPCEV
LLDTCLERPNATVTKITVKPKNKWRPLPLDTVELEKQCSRKLRMSAKQAMKIAEKLYTQG
LISYPRTETNIFPKELNLTPLVNEQVNDSSWGNFAQRLLQNGLTPRQGKKSDQAHPPIHP
IKYSNTLHGDEAEVYNYVVRHFLACLSSNAVGQETVVEIDIAGEKFIANGLRIIEKNYLE
VYIYEKWSDKEIATYREGEVFRPAGIDMVEEETSPPQLLTEADLISLMDKYGIGTDATHA
DHIDTIKSRQYVGLMDGKHLMPGKLGIGLVMGYDNMGFQMSKPDLRADLEKGLKLICERQ
KDPKDVLKDQIDKYREVFKISLERANLIDQALAEYLGEHPSGSEGPAFNDLPEKTTIFKC
PKCGSDMVLRTRKQGTGKFISCMGFPTCNNAIWFPENIESVDVLDEVCPHCPGNIRKLKF
KLTRNLYTMFGADYTTCIGGCDPAFNEALSVKKDNIISQGRNVTDYSSLSNESVISNSRS
NGTRGFSTQNHASIGLVSGSQNQNRHNNTNRSTNTRPRNNLKSRTSAEDISVPDDSRSNQ
DPRWSSNDAAVMCNCHEAANQFTVRKEGPNQGRRFYTCSKPRGTGCDFFLWADDSQNAQS
NTTRDLNRTAAPSFNAGPSSIAGPSYNDASSSLTGEIKCRCNIAAVRRVVRKDGPNQGRP
FYGCSKSIEESCKFFQWDDENAENTFNNSFSNQNKRKRGENRSKNPQTKSRTARKCGICK
MEGHTRKNCPQNAMD
NT seq
3108 nt
NT seq
+upstream
nt +downstream
nt
atgttacgtgtaataaaggtgttcaatgttgtaaaattaaatttgtgtaaattcaagcaa
catcgttaccttatcgtgagatttaagagttccgtacagaagatgaaagtcctgaatgtg
gcagaaaagaacgatgccgcgaaaaccatcgctggttttctgtcccgtggtagttccaaa
aggagagatggattgagcccatacaataagatctatgaatttagtgtacagttgtggaat
aagaattgtgacatgatcatgacatccgtgtctggtcacttattgaattatgcattcgtt
ggatcgtattgtaaatggcaaagttgccatccattagcattgtttgatgcacccgtaata
aaacagtgtccggatgagaatggtgtaaaaattaagagaacattggaaagagaagtgaaa
caatgccaggcattaattatttggacagattgtgatcgtgaaggagaaaatataggtttc
gaagttattcaagtctgtcaggctgtcaaacagaatattcttatatatagggcaaaattt
tctgagatcacgagtatatctgtaaatagagctcttcagaatctgtgccagccagacaaa
gcaatcagtgatgctgttgatgtaagaagtgaattagatttaagaataggtgctgcattc
acaaggtttcaaacgttgagattacaacaagtatttcctcaaagccttgccgatatgtta
atcagttatggtagctgtcagttccctacattaggatttgtagttgaaagatttttggca
atagagagattcaagccagaaccatattggaaactaagggtcacagataatcgtgataac
atttctgtggaatttagatgggcaagagtaaggttgttcgagaaattaccttgcgaagta
cttttggacacgtgtttggagcgacctaatgctactgtaacaaagataacagttaaaccc
aagaataagtggaggccgttaccactagatacagttgaattggaaaaacaatgttctcgt
aaacttcgcatgagtgcgaagcaggcaatgaaaatcgcagagaagttgtacactcagggt
ctcatcagctaccctcgcacggaaacaaatatatttccaaaagaattgaatttaactccg
ttggtcaacgaacaagtaaatgattcgtcttggggtaatttcgctcagcgattattacaa
aatggattaactcccaggcaaggcaagaagagtgaccaagcccatcctcctatacatcca
ataaagtatagtaatactttacatggcgacgaagcggaagtttataactatgtagttcga
cattttctcgcttgtttatcgagtaacgcagtgggccaagaaacagtcgtagagatcgac
atagctggggagaagtttattgctaatggtctccgtatcattgagaaaaattatttagaa
gtatacatatatgagaaatggtcggacaaagaaatagccacgtatcgagagggagaagtt
ttcagaccagctggcatagatatggtcgaagaggaaacatccccaccgcaattgttaacc
gaggctgatttgatcagcttgatggacaagtacggcatcggtactgatgccacgcacgcc
gatcatatagataccataaagtctcgccaatacgtaggcttgatggatggaaagcattta
atgccaggaaagcttggaataggattggtaatgggatacgacaatatgggttttcaaatg
tcgaaaccggacttgagagctgatttagagaaaggtctcaagttaatatgcgaacgacaa
aaggatccaaaggacgttttgaaagatcagatagataaatatcgcgaggtatttaaaata
tcgctggaacgagccaacttgatcgatcaggctttagccgagtatctcggcgaacatcca
agcgggtcggaaggtccagcgtttaatgatctgcctgagaagactaccattttcaagtgt
ccgaaatgtggctcggacatggtccttagaaccaggaaacagggcacaggaaaatttatt
agttgcatgggatttccaacgtgtaacaatgcaatttggtttcctgaaaatattgaatcg
gtcgacgttctcgacgaagtttgcccacactgtccaggaaatatacgaaaattaaaattc
aaactaacgcgaaatctgtatacaatgttcggtgctgattatacgacatgtataggtggt
tgtgaccccgcctttaatgaagctttatctgtgaaaaaagataatataataagtcaaggc
agaaacgtcaccgattacagtagtctatccaatgaatctgtcatttcgaactcaagaagc
aatgggactcgcgggttctctactcagaaccacgccagtataggactcgtttccggatct
cagaatcaaaaccgtcataataatacaaacagatcgacgaacactagaccgcggaacaac
ttgaagagtcgtacgtcagctgaagacatttcagttcctgacgactcaagatcaaatcaa
gatccacgatggagtagtaacgatgctgctgtcatgtgtaattgtcatgaagccgcgaat
caatttacagtcagaaaagaaggaccaaaccaggggagacggttttacacgtgttcaaaa
cctcgaggtactggttgtgatttctttctatgggcagatgatagccagaatgcgcaaagc
aatacgactagagatttaaataggacagcagctcccagtttcaatgctggaccaagctcc
attgctggaccgagctacaacgatgcgtcttcatcactcactggcgagattaaatgtcgt
tgtaacatagcagcagttcgacgagttgtacgtaaagacggtcctaatcaggggcgacct
ttttatgggtgctccaagagtatagaagaatcatgcaaattctttcaatgggacgacgaa
aacgcagaaaacacatttaataactcgttcagtaaccaaaataaaagaaagagaggagaa
aacagaagtaaaaacccacaaacaaaatctcgtactgctaggaaatgcgggatttgtaaa
atggaagggcatacaaggaagaattgtcctcagaatgcaatggattga
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integrated database retrieval system
