Ceratina calcarata (carpenter bee): 108627853
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Entry
108627853 CDS
T06061
Name
(RefSeq) vacuolar protein sorting-associated protein 18 homolog isoform X1
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
ccal
Ceratina calcarata (carpenter bee)
Pathway
ccal04140
Autophagy - animal
ccal04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
ccal00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
108627853
04148 Efferocytosis
108627853
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccal04131
]
108627853
Membrane trafficking [BR:
ccal04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
108627853
Hops complex
108627853
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pep3_Vps18
Clathrin
zf-C3HC4_2
zf-RING_11
zf-RING_5
zf-RING_16
zf_RING_Vps8
zf-C3HC4
zf-RING_2
zf-RING_Vps41
zf-RING_UBOX
zf-C3H2C3
Terminase_2
zf_RING_Vps8_fungal
zf-rbx1
Motif
Other DBs
NCBI-GeneID:
108627853
NCBI-ProteinID:
XP_017884885
UniProt:
A0AAJ7S5A3
LinkDB
All DBs
Position
Unknown
AA seq
1002 aa
AA seq
DB search
MTSMFDQYEQASQRSKQVYAPPIRPDISTAGFIQMKFQDDGPIFIKQKVNFLPSDKIVQL
VVNNNIIVIAMANNILLRIDMKHPDAPEEIDISKYAVNMKISGMFLDPLGNHLLIALIPK
FAHLENIPPELFYLHRKTTKLKQASKFKGHQITAVGWNFSNTSETMTGPILIGTSRGLIF
ETEIGLDGDKIFNTSLEQYWRQLPNYLPLYGTKEVEGLVFDIGKNSKPPITGLEFHKIPN
SDKYVIVVTTLMRIYQYIGAVPNSEEKPLLQQVFNKYLNVQETFIEVISQLPYSKMQFYY
PAVGALPKSFGWLTETGILYAQIDPKVNSNNILMNQQMLNCPETSLMGSNISQTTTAPLS
FVLTEFHALLLYSDRVKGVSLLNQELIFEDIYNDAVGSLIYITKDYVTRSIWAYSERAVF
KYRVNKEDRNVWQVYVDKGEFELAKQYCRDNPAHVDHVLVKQAEMLFKNKEYEKSALTYA
DTHSSFEEISLKFLQEWQIEALKTFLKKKLEGLKMQDKTQITMIVVWVIELFMNQMGVLR
SNNKSYLHDSQYLELQKQFDSFLAIPKVEECIKRNRSTIYDLMASHGDKDNLIRLTIMHC
NYEEVIRQHLYKNNHLEALEVLKSQNNKELFYQFAGILLQELPRPAVTALISQGSMLQPS
KLLPALVSCNSDEKHAKEIIRYLEFCVYKQSCQEQAIHNFLLSLYARYKQDEVMRYISSQ
GQDINMVHYDVYYALRLCQEVKLTEACVQLSALLGLWTTAVDLALTISVDLAKQIAAMPS
DHDDELRKKLWLKIAEHVVREKDDIQQAMEFLKDCDRVKIEDILPFFSDFVTIDHFKEAI
CKSLQEYNQNIQDLKNEMQEATKAAELVRKDIQEFRTRCTFIHAKDTCNTCDVQLLLRPF
YVFPCGHRFHSDCLVAALTPMLSMDQRTKLADLQRQLTALSNRSEDTTSVGSVSLSTKDQ
IKADIDELIASECLYCGELMIESIGKPFIEEEDYERVMKEWA
NT seq
3009 nt
NT seq
+upstream
nt +downstream
nt
atgacatcgatgttcgatcagtacgaacaagcatcgcaaagatcgaaacaagtatatgca
ccaccgattcgccctgatataagtacagctggatttatccaaatgaaattccaagacgat
ggaccaatttttataaagcaaaaagtgaactttttaccaagtgacaaaattgtgcagctc
gttgtaaacaacaatatcattgtcatcgctatggctaataatattctcttacgcattgat
atgaaacatccagatgcacctgaggaaattgatatatctaaatatgcagtgaatatgaaa
atatcagggatgttcctcgatcccttaggcaatcacttgttaatagcattgattccaaaa
tttgcacatctagaaaacattcctcctgagttattctatttacacaggaaaacgacaaag
ttaaaacaggcaagtaaattcaaaggacatcaaattactgctgttgggtggaacttctcc
aatacctctgagactatgactggtccaattctaataggtacctcgaggggcctaattttt
gaaaccgagattggtttagacggcgataaaatatttaatacaagcttggaacagtattgg
cgtcagcttcctaactatttacctctttatggtactaaagaggtagaaggattggtattt
gacatagggaagaacagcaaaccgcccatcacaggtttggaattccataaaataccgaat
tctgacaagtacgtgattgtcgttacaactttaatgcgaatttaccaatacatcggagca
gtaccaaattcagaagagaaacctttgttgcaacaagtttttaacaagtatctaaatgta
caggaaacatttatcgaggtaataagtcagttgccttattcgaagatgcagttttattac
cctgcagtcggtgctctaccaaagtctttcggttggctcacggaaactggcatattatac
gctcagatcgatccaaaagtaaattcgaacaacatactaatgaatcagcaaatgttgaat
tgccctgaaacgagtttaatgggcagcaacatctcacaaacgactactgcaccactgtct
ttcgttttgacagaattccatgcactgttactatactcagaccgcgtaaaaggtgtatcg
ctcttaaatcaggaattgatattcgaagatatctacaacgatgctgttggaagtttaatt
tatatcactaaagactacgtgacgcgatccatatgggcttatagcgaaagggcagtgttt
aaatacagagtcaataaagaagataggaacgtttggcaggtttacgttgacaaaggcgaa
tttgaactcgcgaaacaatattgtagagacaatccagcacatgtagatcatgtgcttgtg
aagcaagcagaaatgctttttaaaaataaggagtacgagaagagtgctctcacctatgca
gacactcattcgtcgttcgaagagatttctctgaaatttctccaagagtggcaaatagag
gctttaaagacgttccttaaaaagaaacttgaaggattaaaaatgcaagataagacgcaa
ataaccatgatcgttgtatgggtgatcgaattgttcatgaatcagatgggtgtattacgg
agtaataacaaatcatacttgcacgattcgcaatatttagagctacagaaacaattcgac
agtttcctcgcgataccaaaagttgaggagtgcatcaaaagaaatcgtagcacaatatac
gatttgatggcaagccacggcgataaagataatcttattcgcctgactataatgcattgc
aattacgaagaagtgatacgtcaacatttgtacaaaaataatcatttggaagctctcgaa
gttctgaaaagccaaaacaataaagagttgttttatcagttcgccggtattctcttgcaa
gagttaccgaggcccgcggtgaccgctctgatctcgcaaggttcgatgttgcagccgtcg
aagcttcttccagctttggtctcttgcaatagcgacgaaaaacatgcgaaagagataatc
aggtatttagaattttgcgtttataagcaaagctgccaggaacaagcgatccataatttt
ctattatcgctctacgctcgttacaagcaagatgaagtgatgcgttacatcagttctcaa
gggcaagatataaatatggttcattacgacgtatattacgctttgcgattgtgccaagaa
gtcaaattaacagaagcgtgtgtgcaattgtccgcattacttggcctgtggacgacagca
gttgatctggctttaacaattagcgttgatctcgctaaacaaatagctgctatgccttcc
gatcacgatgacgaattaaggaagaagttatggcttaaaattgctgaacatgtggttcgc
gaaaaggacgacatacagcaagcaatggaatttttaaaagattgcgacagagtcaaaata
gaagacatactaccgttcttctcagacttcgtcactatcgatcattttaaagaagccatt
tgcaagtcattacaggaatacaatcaaaatattcaagatctgaagaatgaaatgcaagag
gcgacgaaagctgctgaactcgttagaaaggatatacaagagttcagaactaggtgtaca
tttatacacgcgaaagatacgtgtaatacctgtgacgtgcaattactattacgaccgttt
tacgtgttcccctgtggacacagatttcacagcgactgtctcgtcgctgcattgacacct
atgctgtcaatggaccaaagaacaaaattggctgatcttcagcgtcaactcacggccctc
tcgaacagatccgaagatactacgtcggtcgggtctgtgtctttgtctacgaaggatcaa
atcaaagctgacatcgatgaattaatagcgtctgagtgtttatattgtggggaacttatg
atagagtctataggtaagccgtttatagaagaggaagattatgaaagagtaatgaaagaa
tgggcgtga
DBGET
integrated database retrieval system
