Ceratina calcarata (carpenter bee): 108627955
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Entry
108627955 CDS
T06061
Name
(RefSeq) ATP-dependent helicase brm isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
ccal
Ceratina calcarata (carpenter bee)
Pathway
ccal03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ccal00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
108627955
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccal03021
]
108627955
03036 Chromosome and associated proteins [BR:
ccal03036
]
108627955
Transcription machinery [BR:
ccal03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
108627955
Chromosome and associated proteins [BR:
ccal03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
108627955
Chromatin remodeling factors
BAF complex
108627955
PBAF complex
108627955
GBAF(ncBAF) complex
108627955
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
HSA
Bromodomain
BRK
ResIII
QLQ
HDA2-3
DEAD
NirdL-like_HTH
Motif
Other DBs
NCBI-GeneID:
108627955
NCBI-ProteinID:
XP_017885061
UniProt:
A0AAJ7NA27
LinkDB
All DBs
Position
Unknown
AA seq
2052 aa
AA seq
DB search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NT seq
6159 nt
NT seq
+upstream
nt +downstream
nt
atgccaccgccacaagcaccaagccctatgggtcgccctcaacaggcaccatcaccatct
aatcctcaaggtagtccaatgggtccaccacagcatcatccccatagtccaactcaggct
tatcaacctggtccaccaatgccaccgggtggcccacctatgtctcaatcgtctcaacaa
cctccacctcaacaacaaaattattcatctcatccacaacaaatgcagactactatgggt
ccacagggccaaggtggatccggcgggccagttggccaaaactctagctcacagcaagga
cccggaggacccatggtaccaggacaaatgggtccgaacggaccacaaggaacatcccac
atgatgcagcctggtccaaatcaaatgaattcgaatggaccagggcaaatgaatactgga
cctaatcaaatgggatcaggtggtccaggacctattgggcctggtcatatgggacaagga
ggtggagggccaccaggaggacctcacatgggtcagagtcctagccagatgggaccagga
agtggatccgtaccaggtccacagatgagttccggaggaccaccgaattctcaaatgatg
cctggaggtccggggcacatgagtggtccgccagggccaggtcatatgaacacaggcgga
caacaaggtcacatgagtacgggtggcccacctggaccgggacacatgagttctaatggc
ccaccaggctcgggacatgttaatgcgagtggtccaccaggatcaggacatatgaatact
tcgggacctccaggttcaactcatatgaatgccagcggtccgcctggaagtcatctaaat
agtgggccacctatgccgagtcatatgaatgcgggtggcccaccaacatcaggacatatg
agcaccagtgggccaggaagtcatttaggccccggaggaccaggtcaaatgccaccgggt
ggtcctggtgcgcacggtatggggccaggaggaccaccaaatcaaatagggcctggtggc
ccaagtcagatggttccaggtaatcaaggtcccatggtgcccagtcctataggaccagga
ggacccgggcagatgggacataatggaccttcgcaaatgggtccgggtggacctgggcaa
atgaacatggggacaccttcatcacaaatgggaatgacaggacctacaggaccgggaaat
caaatgggaccgggaggaccaggtagtcaaatgggtccaggagggccaggaaatcaaatg
ggtccaggaggtccaggaaaccaaatgggtccaggaggaccagggagtcaaatgggtcca
ggaggaccagggagtcaaatgggtccaggaggaccagggagtcaaatgggtccaggagga
ccaggaagtcaaatgagtgctggaaacggaccgaacgggttaggacaaatggggccagga
actggtcctgggggacaaataccaccaggtaatggacctggaggtcccatgggtcctgga
agtggtcctggcacacaaatgggatcgaatagcggaccaggaggtcaaatgggcccaggt
agcggtcccggaaataatggtggaaatcaaatgggaacaggaaatcctcctggaactccg
ctaacaccaggaagcggtcctagcgggccaatgggtccaggaaatggtccaagtgggcaa
atgggactaggaactgggcctggtggtcaaatgggaccaggaaatttgcctggaggtcaa
ttgggccccggaaatggtccgagtactcaaatgggtcccggaagtggtccaggttcacaa
atgggtccaagtgggcaaatgggtcctaatggtcctgcagggcaaatggttcaaagtggt
ccaggggggcaaataccatctactggccctccaaatcaaatgggaccgggcggtccaggc
agtcagttaggtcacggtggtacaaataaccagatggggccaaatggtccaagtgggcaa
ccacctcctggtcaaatgggtcctggtccacaaagtcaacaaatcggccctggtgctccg
gtaaatcaaatgagtcaggctggacctggtcagattggtccttccggacctggtggaccc
cctggcggaccgcccggtggaccacctactggaccgcctggtgctggacaagagaactta
aatgctctgcagaaagctattgactccatggaagagaaaggacttcaagaagatccgcgt
tactctcagttgcttgctttaagggctcgacaaggcagcataggagacaaacaaactttc
agtccacaacaattacagcaattacgtgtacaaataatggcatatcggttgttggcaagg
aatcagccattatcgcaacaacttgcacttgctgttcaaggtggagctcctcctccaggt
atggttcaacggcctcctatagatccatctcaaggatccactacaactacaggtccacaa
atctctggacctaacgtaatcggtcctggtggccctccaaggccaggttgccaaacgccg
cagcaacagcagcctcctcagccaggtgccaagactaacagagtaacgagtgtagctaaa
ccagctggtttagatccgttactgattctacaagaacgtgaaaacagagtggcagcgcgt
atagcattacggatggaacaactgaataacatgccaaccaatatgccagaagatcttcgt
atccaggcacaaattgagctacgaatgcttagagtactgaatttccaaagacagttacgg
tcagagattctagcatgcactcgaaaggacaccactttagaaactgcagtgaatgtaaaa
gcttataaacgtacgaaaagacaaagtcttcgagaagctagagctactgaaaaactcgaa
aagcaacaaaaattggaagctgaacgtaaacgtagacaaaaacatcaagagtttctcaat
tctgtgctacaacatggcaaagattttaaagaatttcatcggaataatgtggccaaattg
gctaggctcaataaagccgtcctcaattatcatgctaacgctgaaagagaacaaaagaaa
gaacaagagcgtattgaaaaagaacgtatgagacgtctcatggcggaagatgaggaaggt
tacagaaaattgattgatcaaaagaaagacaaacgcttagcgtttttactatctcaaacc
gacgaatatattagtaatcttactgagatggtgaagcagcataagatagaacaaaagagg
aaacaagttgaagaacagaagcgtaagaagcaaaagaaaaagaaaatgcaagaagctgcc
gaaggaggcgaagatggaaatgccaacgaggatactcgtgtaggagtcattgaaacagct
actggacgcacattaaccggtgatgaagctccactcttgagccaactttcagcattctta
gaatctcatccagggtgggaaccaatcgaatctgaaagtgaagatgacgaagaaagtgag
gatgataatgatggtgacgagaaaggtgaacataaagaaaaatctgctggtgattctgaa
gaagacaaagtcaagaagacgatacataaagccaaagtagaggatgatgaatacaaaaca
gaagaacaaacatattacagcattgctcacactgtacacgaagtggtaacagagcaggca
tctatcatggtcaatggaaaattaaaagaatatcagataaagggtttagaatggttagtt
tcattatttaacaataatttgaatggtatacttgcggacgaaatgggtcttggtaaaacc
attcaaacaatagctttggtgacttatctgatggagaagaagaaagtcaatgggcctttc
cttattattgtaccattgtcgactttgtcaaactgggttttggaatttgagaaatgggca
cctagtgttgtagtggtgtcctataaaggttcaccagccggtagaagagcgattcagtct
caaatgagagccactaaatttaatgttttactcactacgtatgagtacgttattaaggac
aaaggcgttttagctaaattacagtggaagtacatgattattgatgaaggacacaggatg
aagaatcatcactgtaaactgactcaagtactaaatacgcattacctagctcctcataga
ttattattgacaggaacaccattgcaaaataaattgcccgaactatgggcactattaaat
ttcttgcttccttcaatcttcaaatcttgtagcactttcgaacagtggtttaatgcacca
ttcgcaaccactggtgagaaagttgagctaaacgaggaagaaactattcttattattcgt
cgcttacataaagtactacgacccttcttgttgagacgtttgaaaaaagaggttgagtcc
cagttgcctgataaagttgaatatattattaaatgcgatatgtctggactgcaaaaagtt
ctttataagcatatgcagagtaaaggcgtattattaacagatggttcagaaaaaggaaaa
cagggcaaaggaggtgcaaaagcattaatgaacactattgtgcaattaagaaaattatgt
aatcatccattcatgtttcaagctattgaagagaaatattccgagcacgtaggtacacaa
ggatctggtgttattacggggcccgatttgtatcgcgcttctggcaagtttgaactttta
gaccgtattcttccaaaattgaaagcaactaatcacagagtattattattctgtcaaatg
acacagttaatgaccattatggaagattatttaagttggagaggatttatgtatttacga
ttagatggtacgacgaaagctgaagacagaggagacttgttgaaaaagttcaacgacccg
ggttccgaatatttcttatttttattgtcgacacgtgctggtggtctcggattaaattta
caagctgcagacactgttatcatcttcgattccgattggaatccgcatcaggacttacaa
gcacaggatagagcacacagaattggtcagaagaatgaagtgcgcgtgctgagattgatg
acggttaattcagtcgaagagagaatattggccgcggctaggtacaaattaaatatggat
gaaaaagtcatacaggcaggaatgtttgatcagaaatccactggctctgaacggcaacag
tttttgcaaagcattttacatcaggacgatgctgatgatgaagaagagaatgaagtacca
gatgatgaaacagtcaaccaaatgatcgcacgaactgagggtgaatttgagatattccaa
aagttagacttggagcgaagaagagaagaagctaagttaggtccaaatagaaaatcaaga
ttattagaagaagctgagttgcctgattggttggtgaaagacgatgacgaggttgaacga
tggacgtacgaagaagacgaagacagatttcttggacggggctcgaggcagcgaaaagaa
gttgattatactgatagtttaactgagaaagaatggctaaaagcaatcgacgatgatggt
gctgagtacgaagaggaagaggaagacgataaaaagaaaaagaaaacacgaaaacgaaag
aaaaagggcgaggaagatgatgaacctatgccaaagaaacgaagaggcgcgggatcatcc
atcgacccgaaaatgaaacgagccatgaagaaattgcttatggtagtcgttaattatacc
gacagcacggatggcagacttcttagtgaaccattcatgaaattaccatctaggagggaa
ttgccggattattatgaaattattaaaaaaccattaacaatcaataagttacttcaaaag
gttgaagaaggaaagtacgccgattttgatgatctcgaaaaagactttatgcaactttgt
aaaaacgcgcaaatttataatgaagaagcttctctaatacatgaagattccatagtattg
caatctgttttcacaaatgcccgtcaacgcatcgaagaggaaggcaataattctgatttg
gatgataaaggcgatggtgaagatggatcagatgcagactctagcgtgagaatgaaaatt
aagttaaaaggaagaaaaggcgaaggcaggggaggtcgtagaaaaagggtcactaagaag
tatatatcagatgacgacgatgatgccgatgacaactga
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integrated database retrieval system
