Ceratina calcarata (carpenter bee): 108628036
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Entry
108628036 CDS
T06061
Name
(RefSeq) laminin subunit gamma-1 isoform X1
KO
K05635
laminin, gamma 1
Organism
ccal
Ceratina calcarata (carpenter bee)
Pathway
ccal04512
ECM-receptor interaction
ccal04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
ccal00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
108628036
04518 Integrin signaling
108628036
BRITE hierarchy
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Paralog
GFIT
Motif
Pfam:
Laminin_N
EGF_laminin
EGF_LMN_ATRN
Laminin_B
Motif
Other DBs
NCBI-GeneID:
108628036
NCBI-ProteinID:
XP_017885174
UniProt:
A0AAJ7J662
LinkDB
All DBs
Position
Unknown
AA seq
1619 aa
AA seq
DB search
MTRGRHKKTLVFIAICLVSVFAEPDPTEELYIRFLKNQDEDKCYDDNGRPQRCIPPFENA
AFHVHMEATNTCGQDRPTEFCKQTGVQKKSCEICRYGDHPASFLTDYDNNDNATWWQSET
MFEGIETNQVNLTLSLGKTFDITYVRVLFESPRPESWAIYKRKNEKSSWEPYQFYSATCR
DTYDLPDIKETVQGDDTRVLCTSDFSDISPLTKGTVAFSTLEGRPSAYKFESNPALQEWV
QAIDLRITLDRLNTFGDEVFGDDHVLKSYYYAIADVAVGARCACNGHAGECVNSTSVDGK
TRRVCRCEHNTAGPDCNECLPFYNDAPWGRATTTDAHECKPCNCNGYSERCYFDKELYKA
TGHGGHCLDCQDNRDGANCERCRENFYQRPEDKYCIACNCNEIGSRSLQCNSEGKCQCKP
GVTGDKCDLCAANYFNFGSYGCTSCECNVAGSLANKPNCDAVSGVCTCKENVEGKRCRVC
KPGFFNLALNNKFGCTPCFCYGHSSVCRPATGYSKVVIESMFVRAAERWSATVAGNPIPL
QYDPLTQSISVTALDRDNVYFVAPERFLGDQRSSYNQDLSFTLRIGEAGPAPTVRDIILE
GGNGEQITQPIFGQNNHLPSGTPHKYRFKLHEHPSYGWEPRLSSRAFMSILSNLTAIKIR
GTYTHQGRGFLDDVRLETAHRGAAGEIADWVEHCQCPHGYVGQFCESCAPGFHHDPPNGG
PFSYCVPCNCNGHADICEAETGQCICEHNTAGSNCELCRRGYYGHPLKGTPDDCKPCPCP
DNGPCILLGNNPDPICSECPSGRTGARCETCSDGYFGNPERGIACRPCDCNNNIDLNAVR
NCNHETGECLKCVNNTAGFHCEECLPGYYGDALSDLKEDGCKLCQCFHAGTVELEDGRVA
PCEQLTGHCSCKPHVVGRNCDKCEEGYYHILSGEGCAPCNCDLEGSYNRTCNPVTGQCEC
RPGITGLHCDACVPYQYGFSRDGCKPCDCDYIGSQDLQCDANGQCPCLPNVEGRRCDRCK
ENKHNRQNGCVDCPDCYNLVQDAANRHRGRLTELENTLKKINSSPTVIKDADFEKELKNV
QDRVKNLQEIAKQGSGSENKTLVEQLDELRDQLNEIGDISQTVNLTALDAYKTTSEGQIN
IDEAEKVLDKIHAQLTDAEDYLATAGSTALSEAKMRAEQVGQQNKQMTTIAQEARVLAEL
NVNEAKKIHDLAEKARNTTIEAYTLAKKAIAKCSNVTDDIRGLENKLELLEHRMNEVKNL
TSIAATKSSAVSQEAIDLLILDLTLPAVDIDQLQKQVDDVNNEGLRLKEQAQLLLDESED
LINEMVEKVKRSEELIERAKEQQAATAELIAELDRAKEIADDAVKRGDQTLKEAQETLKK
LGEFHAEVERERVKAQDALKDIRDIEALIASAEEQTLRAGEILLDSEDNAEYARKRAQDA
QTYAEEASAKANAIRTEANKTKIEALRVGNEAEKLSLRVDNTESMMQQYEIQSGHDTNIT
TEANHKVGQAKINVTLASQQVDKALSEVAEIIKELENLSEIDDTDLNRLEERLTAAENEI
AAANLDQRIRALTDAKNLQTQWVNNYKDEVSRLKMEVENIDDIRRVLPVDCHNRVRLEP
NT seq
4860 nt
NT seq
+upstream
nt +downstream
nt
atgacgcgagggaggcataagaaaactttagtgttcatcgcaatttgtctggtctcagta
tttgcggaacccgaccccacggaagaactttacattcgatttttaaagaatcaggacgag
gacaagtgttatgatgacaatgggaggccccagaggtgcataccccctttcgagaacgca
gcgtttcatgtgcacatggaagctacgaacacgtgcggtcaggatcggccgacagaattt
tgtaaacagactggtgtccagaagaagtcctgtgagatatgtcgatacggggaccatccg
gcctcgttccttaccgattacgataataacgataacgcaacttggtggcaatcggaaacg
atgttcgaggggatcgaaactaatcaagttaatctcacattatccttaggaaaaacgttc
gatataacttacgttagagtgctgttcgagtcgccacggccagaaagttgggctatttat
aaacgaaagaacgagaaatcatcatgggaaccttatcaattctattcggcgacctgtaga
gatacgtatgacttgccagatatcaaggaaacggtacaaggcgacgataccagagtatta
tgtacttccgatttttccgatatatcaccgttgacaaagggtacggtcgcgttttccacg
ctagaaggccgtccgtcggcctacaaattcgaatcgaatccagccctgcaggaatgggta
caagcgattgacttgaggatcaccctagatcgtttgaacacgttcggcgacgaagtgttc
ggcgatgatcatgtattaaaatcctactactatgcgatcgctgacgtcgcggtcggcgca
cgttgtgcctgcaacgggcacgctggagaatgtgtaaacagtaccagcgtagatggaaaa
actcgcagagtatgtagatgcgagcataacacggcaggtccagactgcaacgaatgtcta
cctttttataacgatgcaccttggggacgtgctaccactactgatgcgcacgaatgtaaa
ccttgtaattgcaatggatattcggagagatgctatttcgataaggaactatataaagcc
accggccacggaggccactgtctggattgtcaagataatcgcgatggcgcgaattgcgaa
cgctgtcgagagaatttctaccagcgtccggaggacaagtactgcatcgcctgtaactgc
aatgaaatcggttccaggagcttgcaatgtaacagcgaaggaaaatgtcaatgcaaaccc
ggtgtgacgggcgataagtgcgacctttgcgcggctaattatttcaacttcggttcgtac
ggctgcacttcctgcgaatgcaacgtagctggatctctggctaataaaccaaattgtgat
gccgtcagcggtgtttgtacttgtaaagaaaatgtggaaggaaaacggtgtcgcgtatgt
aaaccaggatttttcaatctcgcactgaataataaattcggctgcacaccgtgcttctgc
tacggacactcctcagtctgcagaccagcgactggctactcaaaagttgtgatcgagagc
atgttcgtaagagcagccgaacgatggtcagctaccgttgccggcaacccgattccgctt
cagtacgaccctcttacccaaagtatatccgtcacggcgttggatcgcgacaatgtctat
ttcgttgcacccgagcggttccttggcgatcaacggtcgtcttataatcaggacctgtca
tttacacttagaatcggggaagctggtcctgcgcccactgtacgtgatataatactcgag
ggtggaaatggcgagcaaattacgcaaccgatttttgggcagaataatcatttaccttcg
gggacgccgcacaaatatcgtttcaagcttcatgaacatcctagctacggctgggagcca
cgactctcctccagagctttcatgtctatcttgtcgaacttaacagctattaaaattcgt
ggtacctatacgcatcaaggtcggggattcttagacgacgttagattggaaacggctcac
cgtggggccgcgggtgagattgccgattgggtggagcattgccagtgtcctcatgggtac
gttggccaattttgtgaatcgtgtgctcctggattccatcacgatccgccgaacggcggg
ccattctcctattgcgttccgtgtaactgtaacggtcacgctgatatttgcgaagccgag
acaggacaatgtatttgcgaacacaacacggctggtagcaattgtgaattgtgtagacgt
gggtattatggtcatccattgaagggtacgccagacgattgtaagccgtgtccctgccct
gataatggaccttgcatattacttggtaataatccagatccgatatgctctgagtgtcca
tcgggtagaacaggggccaggtgcgagacatgttcagatggatatttcggaaatcctgaa
agaggtatagcttgcagaccttgtgattgtaacaacaatattgatttgaacgcagtccgg
aattgtaatcacgagactggtgaatgtttgaagtgcgtgaacaatactgctggtttccac
tgcgaagaatgcctcccaggctattatggagatgctttgtccgatcttaaagaagacggc
tgcaaactgtgccagtgtttccacgcgggcacggtcgaactcgaggatggcagagtggcg
ccttgcgaacaattaacgggacactgttcgtgtaagccccacgtagtcggtcgcaattgt
gacaaatgcgaggaaggatattatcatatattgagtggagagggatgcgcgccttgtaac
tgtgacctggaaggatcttacaatcgtacttgcaatcctgtcactggtcagtgtgaatgt
agacctggcattaccggtctacattgcgatgcatgcgttccttaccagtacggattcagc
cgagatggttgcaagccctgcgattgcgactatattggttcccaagatctgcaatgtgat
gctaatggacagtgtccatgtctcccaaatgtggaaggtagacgttgcgatcgttgcaaa
gagaacaaacacaacaggcaaaacggatgcgtcgattgtccggattgttacaatctcgtc
caagatgccgctaacaggcatagaggacgtttgactgaattagaaaacacgcttaagaag
attaatagcagccccactgtcataaaagatgcggactttgagaaggaactgaaaaacgta
caggacagagtgaagaatctccaggaaatcgcgaaacaaggatctggcagtgagaacaaa
accttggtggaacaacttgatgaattgcgcgaccagttgaacgaaattggtgacatttcg
caaaccgtgaacctgacagctttggacgcgtacaaaacaacttccgaagggcagataaac
atcgacgaagcggaaaaggtgctcgataaaatacacgctcaattgaccgacgccgaggat
tatttagccacggctggatcaactgctctgtccgaagcgaaaatgcgggcggaacaagtt
ggtcaacagaacaaacagatgactacgatcgctcaagaagcgcgtgtattagcggagttg
aatgtgaacgaagcgaagaagattcacgatctggcagaaaaagcgcgaaacacaacgata
gaagcttatactctagcgaagaaagctatagcgaaatgctcaaacgtgaccgacgatatc
agaggattggaaaataaattggagttgctggaacatcgtatgaacgaggtaaaaaatctc
accagcatagcggccactaaatcatcggctgtttcgcaagaggcgatagacctgttgatt
ctcgacttaacgctgccggcggtggacatcgaccagttacaaaaacaagttgacgacgtg
aacaatgaaggattacggttgaaagaacaggcgcaattattgctggacgaaagcgaggat
cttataaatgagatggtagaaaaggtcaagaggagcgaagagttgatagagcgagcaaaa
gaacaacaggcagccactgccgaacttatcgccgaattagatcgcgcgaaagagatagcg
gatgacgctgttaaacgaggcgatcaaacgttaaaagaggcacaagagacactgaagaag
ttaggtgaatttcacgccgaggtagaacgtgaacgtgttaaagcccaggatgctttgaaa
gacataagagacatcgaagcgttaatcgcgagtgcagaagaacaaactctgcgagcagga
gaaatattactcgattccgaggataatgccgaatacgctcgtaaaagagcgcaggatgct
cagacttacgcggaagaggctagcgcgaaagcaaacgcgattagaaccgaggcgaataaa
actaaaatagaagcgcttcgtgtaggaaacgaagcggagaaattaagtctacgagtcgac
aatacggaatcgatgatgcaacaatatgaaattcaaagtggtcacgatacaaatattacg
acagaagcgaatcataaagtcggacaagctaagatcaatgtaacgttggcatcgcagcaa
gtcgataaagcattatccgaagtagctgagataataaaagaacttgaaaacctgtccgaa
atagatgataccgatttgaatcgactggaagaacgtttaactgccgctgagaacgagatc
gcagctgctaatctggatcaaaggattcgtgcattaacggacgccaagaacttgcagaca
cagtgggtaaacaattataaggacgaggtcagtagattgaaaatggaagttgagaacatc
gacgatataagaagagtgttgcctgtcgattgtcacaatcgtgtacgactcgagccttaa
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integrated database retrieval system
