Ceratina calcarata (carpenter bee): 108628069
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Entry
108628069 CDS
T06061
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 23 isoform X1
KO
K15166
mediator of RNA polymerase II transcription subunit 23
Organism
ccal
Ceratina calcarata (carpenter bee)
Brite
KEGG Orthology (KO) [BR:
ccal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccal03021
]
108628069
Transcription machinery [BR:
ccal03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Other mediators
108628069
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Med23
Motif
Other DBs
NCBI-GeneID:
108628069
NCBI-ProteinID:
XP_017885239
UniProt:
A0AAJ7NA59
LinkDB
All DBs
Position
Unknown
AA seq
1355 aa
AA seq
DB search
MTSETQITNIVNDILKVEAIEEAFSCVLVYHPNSESEKITTWQVELTSAMSNLSKEQQEN
GVRQFLSMAAAMTNHRRLQLLLSLLENLVISNILPARLVCECILNCDKLQYQLEDFWVEC
FVLIRHIIGGVDYKGVREIMKGCREKAQTIPPRLDASILPQLKALENVLEYIFDRNACLL
PGYFIVTEIQKAYPDGKNWPHWKLAQLLSNFVESFRNTAQMVSIVGHSKMLPVVEHTGYA
DLINPWVLDTTTLKFSLKGNLPYDEDLLKPQTGLLRYVLEQPYSRDMVCSMLGLQKQQKQ
RCIALEEQLVELVILAMERAENETLPAEGTDGTVANHYVWLHLSSQLIYFVLFSYACFPN
IVMAIHDKLAGRDLRKGRDHLMWVLLQFISGSIQRNPLSNFLPVLKLYDLLYPEKEPLSV
PDYSQALCTHQMAITCIWMHLLKKAQCEHSNIHRPIPHTLKLHHEFLQHLVMPNTSLCMG
SDYRIALLCNAYSTNQEYFGRPMAALVDTILGTQKGQQQQPMQTLQNNAALANGPTTPLS
MSILDSLTVHSKMSLIHSIVTHVIKLAQSKSNMALAPALVETYSRLLVYTEIESLGIKGF
ISQLLPTVFKSHAWGTLYTLLEMFSYRMHHIQPHYRVQLLSHLHSLAAVPQTNQTQLHLC
VESTALRLITGLGSAEVQPQLSRFLSEPKTLVSAESEELNRALVLTLARSMHVTGTGSDN
QSGTWCKELLNTIMQNTPHSWANHTLQCFPTVLSEFFQQNSVPKENKQQIKKAVEEEYRN
WASMSNENDIIAHFSVPGTPPLFLCLLWKIIFETDRISPIAYKILERIGARALSAHLRKF
CDYLVFEFANSVGGQHVNKCVDTVNDMIWKYNIVTIDRLILCLVLRTHEGSDAQVCFFII
QLLLLKAVEFRNRVQEFVKENSPEHWKQSNWHEKHLAFHRKFPEKFAPEGIMEQASGGPS
QYQNLPVYFGNVCLRFLPVFDIVVHRYLEIPAVSKSLETLLDHLGCLYKFHDRPVTYLYN
TLHYYERKLRDRPPLKRRLVSAVLGSLREIRAPGWALSEAYHMYMSRSADDVVTWMPELD
YYVRLVQRIVETMSGTAHFPATDWRFNEFPNPAAHALYVTCVELMALPVAPNIVANSILD
VIAKGYTVIRSDEIHLWINCVGLLLAALPECYWSALHDRLVETISSPGLANWQYSNLTPF
EVFNFNNTHNSLLENIYSYMLALAHSVWHHAGVGQITTMPQFIKEKLQPVVNSEEQLIYA
YHLIGPTLARFNAERPHCVVELAVCLYEMLEQVDRLQTHLKYMDPVCDLLYHIKYMFVGD
MMKNEVECIIRRLRPALQMRLRFIAHINIDEIQSS
NT seq
4068 nt
NT seq
+upstream
nt +downstream
nt
atgactagtgaaactcaaatcacaaatatcgtaaacgatattttaaaagtagaggctata
gaagaagcattcagttgtgttcttgtttaccatccaaacagtgaaagtgaaaagataaca
acatggcaagtcgaattaacatctgctatgtcaaatttatcgaaagaacagcaggagaac
ggtgtaaggcaatttttatccatggcagcagcaatgaccaatcacagaagattacagtta
ttattgtctttactcgagaatttagtcatatctaatattttgccagcaaggctggtatgt
gagtgtattttaaattgtgacaaactccaatatcagttagaagatttttgggttgaatgt
tttgtacttattcgccatatcattggaggagtagattataaaggtgtgagagaaataatg
aaaggatgcagggaaaaggcgcaaacgattccaccgagattggacgcgtccatccttcct
cagttaaaagcactagagaatgtacttgaatacattttcgatagaaacgcttgtttatta
ccaggttacttcatcgtgactgagatacaaaaagcttatcctgacggtaaaaattggcca
cactggaagctggcacagttgctctcaaattttgtcgagagctttcgcaacaccgcccaa
atggtgtccatagtcggacattcgaaaatgttgccagtagtagaacataccggatacgcg
gatttgatcaatccatgggttctcgatacgacgacattaaaattttcactgaaggggaat
ttgccttacgacgaggatttacttaaaccacaaactggtttacttcgatacgtactagag
caaccttatagcagagacatggtctgttcgatgctcggtttgcagaaacagcaaaagcaa
cggtgtattgctttggaagagcaattagtagaactagtaattctcgctatggaacgtgca
gaaaatgagacgctaccagcagagggcaccgatggaactgtcgctaatcattacgtatgg
ttgcatctatcgtcccaacttatatatttcgttctcttttcatacgcctgttttccgaac
atcgtgatggcgatacacgataaattggcaggaagagatctgagaaagggaagggatcac
ttgatgtgggttctgctgcaattcatttccgggagtattcagagaaatccgttatcgaat
ttcttgccagtattgaaactatacgatctcctctacccggagaaggaacctttgtcggtt
ccagattattctcaggcgttgtgtactcatcaaatggctattacctgtatatggatgcat
ctgctgaaaaaagctcaatgcgagcattcgaacatccacaggccgataccgcacacttta
aaactccaccacgagtttttgcaacatttggtcatgcctaacacatctttatgcatgggc
tccgactaccgcatcgctttattgtgcaacgcctattctacgaatcaggagtatttcggt
agaccgatggctgccttggtagacactatactaggcactcagaaaggccagcagcagcaa
ccgatgcaaacgttacagaataacgcagccctcgcgaacggaccaaccacgccgttatca
atgtcgatcttggattcgttgacggttcactcgaaaatgagcctcatacacagcatcgtt
acccatgtcatcaaattggcacaatccaaaagcaacatggcactggcaccggcgctggtt
gaaacttacagcaggctgttagtgtacaccgagatcgaaagtctcggcattaaaggtttc
attagccagttactcccgacggttttcaagtctcacgcgtggggaacgctgtacacgctt
ttggagatgttcagttacaggatgcatcatatacagccgcattacagggtacaacttctg
tcccatctgcacagtctcgcggctgtaccacagactaatcaaacacagcttcatctgtgc
gtagagagcacggcgcttcgcctgatcactggcttaggatcagccgaagtgcagccgcaa
ttgtcccgatttttatccgaaccgaaaactctcgtgtcggcggaatccgaggagttgaac
agagctttggtattaacgttggcacgatctatgcacgtgacgggtacaggttccgacaat
caaagcggcacgtggtgcaaagagctgctaaataccataatgcagaatacgcctcactcg
tgggccaatcacactcttcaatgtttccccacggtgttgagtgaattcttccaacaaaac
agtgtgccgaaagaaaacaagcaacagatcaagaaggcagtggaagaagagtacaggaat
tgggcttctatgagtaacgagaatgacattatagcacatttctctgtacctggcactccg
cctctgtttttatgccttttgtggaagatcatttttgaaactgatcggatcagcccgatc
gcgtataaaatcttggagagaatcggtgctcgagctctctctgctcatctgcgaaaattt
tgcgattacctcgtgttcgagtttgctaacagcgtcggtggtcagcatgtaaataaatgt
gtagacacagtcaacgatatgatatggaaatacaatattgtgaccattgacaggctgatc
ctctgcctagtattgagaactcacgagggcagtgatgcccaagtgtgcttctttataatt
caactgttattgttgaaggctgttgaatttcgaaacagagttcaggaatttgtcaaagag
aattcgccggaacattggaagcagtcgaactggcacgagaaacatcttgcgtttcataga
aagttcccagagaaattcgcgcccgaaggcataatggaacaagccagcggagggcccagc
caatatcaaaatttacccgtttacttcggtaacgtgtgtctacgatttttaccggtgttc
gatatcgtcgttcacagatatctggaaattccggctgtgtcaaaaagtttggaaacactg
ttagatcatttgggatgtttatacaaatttcacgatcgaccagtaacatatctttataac
acgttacattattacgaacgaaaattaagagacaggccacccttaaaacgtcgtttagta
tcagcagtgttaggctctcttagagaaattagagctcctggatgggcactgtccgaagca
tatcacatgtacatgtctcgatccgctgacgatgttgttacttggatgcctgagctagat
tattacgtccgtttagtgcaaagaatcgtagaaacaatgtcaggcacagcgcatttccca
gccacggattggagattcaacgaatttcctaatcctgcagcacatgccttgtacgttaca
tgcgtcgagctcatggctcttcccgttgctccaaatatagtcgctaattcaatattggac
gtaattgcaaaagggtatacagtaattcgatctgatgaaattcatttatggatcaattgc
gtgggtttgttgttggccgctttaccggagtgttactggtcggcgttgcacgatcgattg
gtagaaactattagcagtccaggattagctaattggcagtacagtaacttgacgccgttc
gaagtgtttaattttaataacacgcacaatagtttactggaaaatatatacagttacatg
ttagcgctggcacattccgtctggcaccacgctggtgtcggccagataactactatgccg
cagtttattaaggagaaattacaaccagttgtaaatagtgaagaacagttgatatacgct
tatcacttaatcggacctactttagcaagattcaacgccgagcgaccgcattgtgtcgta
gagttagcggtctgcctgtacgaaatgctcgagcaagtcgatcggcttcagactcatttg
aagtacatggatccagtctgcgatttattgtatcatataaagtatatgttcgttggcgat
atgatgaagaacgaagtggagtgcattatacgaagattaagaccggctttacaaatgaga
ctgcggttcattgcccacataaatattgatgaaattcagtcttcctga
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