Ceratina calcarata (carpenter bee): 108628248
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Entry
108628248 CDS
T06061
Name
(RefSeq) hypoxia-inducible factor 3-alpha isoform X1
KO
K09093
aryl hydrocarbon receptor
Organism
ccal
Ceratina calcarata (carpenter bee)
Brite
KEGG Orthology (KO) [BR:
ccal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccal03000
]
108628248
Transcription factors [BR:
ccal03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
108628248
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAS_3
PAS_11
PAS
HLH
bHLH_NPAS4
bHLH_HIF1A
Motif
Other DBs
NCBI-GeneID:
108628248
NCBI-ProteinID:
XP_026672121
UniProt:
A0AAJ7S6C2
LinkDB
All DBs
Position
Unknown
AA seq
921 aa
AA seq
DB search
MTPTSAPVPTPTTASGPNNPVAMSQLGTVYATKRRRRNGKSLKPPQKDGVTKSNPSKRHR
ERLNAELDTLASLLPFEQNILSKLDRLSILRLSVSYLRTKSYFQVVMHKDKEENSHHDSH
YRARELAAFAAYDHHHLDGEMFLQALNGFLLILTCDGEVFFATHSIESYLGFHQSDIVHQ
SVYELVHSEDREELQRQLMWNSFLPADSASLPLHDALSPQHSHFLERSFTVRFRCLLDNT
SGFLRLDIRGRVKILHGQNRKTEEPPLALFALCTPFGPPSLLEVPQKDVMFKSKHKLDLA
LVSMDQRGKMLLGYSDAELANLGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQKKD
GGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTMDFKVSYLDAGLTNSYFS
DSDNLSGSVMTPTLQNQQTSQRVNRRYKTQLRDFLSTCRNKRTKLAAQSSVSPPVTPTVA
SVDYLTADTSAAAAVAAAYSNLNTMYPTAYAPTAVAASTDPSLTTYIGHTGNYHQTLYPA
TALDNRYLTAATENLFQYRPLGSYYPEYHTSTAYNGFIDVPLPTYETHQLTSKAEDKLYC
QQLGESPKYSYVEARHPSSVSGSPYAASPVASASAMHTATADINIVRAGSRHSLEGGASS
SNSAGSSPVTGPTNGVLTPKIEDVKPEVYGNEAPRQTVLMWGAPPARTPPRNNGSYSPPT
PHSTHSSTHSTNAGDPLKSLAEMNSMNGECKWRQTSPSDQQTTAPSSPRIKASQQQAHQH
HQQQQPQQQQQQQQQQHQQYPVATSQYQAAAAAAAAAAAAAASTIGYAHSHPGHGHGETG
SEHAPVSCGNGDGSRHGHRVGQQHQQQQRLIPPSAPPPPSASARGGIISAGNGPNCPSDS
KPDAGSPLLSISEVTNTLLNQ
NT seq
2766 nt
NT seq
+upstream
nt +downstream
nt
atgacaccgacatcggcgccggtaccgactccgaccacggcgtcgggacccaacaacccg
gtagccatgagccagctgggcaccgtttatgcaactaagaggcgacgccggaacgggaaa
agtttgaaaccaccgcagaaagatggggtaaccaagtcgaatccaagcaaacggcatcga
gaacgactgaacgccgaactggacacgctggcatcgttgctccccttcgagcaaaatatt
ctcagcaaactggaccgactcagcatcctcagactcagcgtcagctacttgcggacgaag
agttatttccaagtggtgatgcacaaagacaaggaagaaaactcgcaccacgattcgcac
tatcgggcgagggagctggctgcgttcgccgcgtacgaccatcaccatctcgacggcgaa
atgtttctccaggcgctgaacggctttctgctcatactgacctgcgacggggaagtgttc
ttcgccactcacagcatagaaagttaccttggcttccatcagtccgatatcgtccatcaa
agcgtctacgagctggtccacagcgaggatcgggaggaacttcaaaggcagctgatgtgg
aactcctttctgcccgcggacagtgccagtctccccttgcacgacgccctttcacctcag
cacagtcattttctcgagcgaagcttcaccgtccgtttccggtgtctcctcgacaacaca
tccggcttcttgcgtctggacatcaggggacgagtgaagatactccatggccaaaatagg
aagacagaggaaccaccgttggctctgttcgctctgtgcacgccgttcggaccaccctcg
ttgttagaggttccgcaaaaggatgtgatgtttaagagcaagcacaaactggatctggca
ctcgtgtccatggatcaacgggggaaaatgttattagggtactccgatgcggagctcgcg
aatctgggcggctatgatctagtccactatgacgacctggcttacgtcgcgagtgcgcat
caagaacttttaaagaccggtgcatcgggcatgatagcgtacagatttcaaaagaaggat
ggtggctggcaatggttgcaaactagctccagattagtgtacaaaaactcgaaacctgac
ttcgtaatcagcacacatcgacccctcatggaagaagagggcagggaccttctcgggaaa
cgaacgatggacttcaaagttagctatctggacgctggtttgaccaacagctacttttcg
gacagcgacaacctcagtggttccgtgatgacgccgacgctgcagaaccaacagacgtct
cagagagtgaataggcggtacaagacgcagttgagagacttcctgtcgacttgtcggaac
aaacgcacgaaactcgccgcgcaatcgtccgtttcaccgcctgtgacacccacggtcgcg
tccgtcgactacctcaccgcggacaccagcgctgcagctgccgtcgcagcggcgtacagc
aacctgaacacgatgtacccgactgcttatgcacctacggcagtcgctgcgagtacggac
ccttcgttgactacctacatcggccacacgggcaactatcatcagacattgtacccggcg
accgcgttggacaataggtatctcacggcagcaacagagaatctattccaatacaggcct
ctcggttcctattaccccgagtatcacacgagcaccgcgtacaacggctttatagacgtc
ccgctgccgacctacgagacccaccaactaacaagcaaagctgaggacaaactatattgc
caacaattaggcgagtcgcccaagtacagttacgtcgaagccagacatccgagtagtgta
agcggttcaccgtacgcggccagtcccgtcgcaagcgcgtcagcgatgcacaccgcgacg
gctgacattaacatcgtccgcgccggcagtcgacattccttagagggtggagcctcttcc
agcaattccgccggaagttcacctgtgacgggaccgacgaacggcgtgctcacccccaaa
atagaggacgtgaaaccggaagtttacgggaacgaggcgccccgacaaacggttcttatg
tggggcgcaccaccggctcgcactccgccgaggaacaacgggagctacagtccacccacg
ccacattctactcactcgtccactcattcgaccaacgccggcgatcccttgaaatctctg
gcggagatgaattctatgaacggcgagtgcaagtggaggcagacgtctcccagtgatcaa
caaacgacggcacccagctcgccgagaatcaaggcgtcgcaacagcaagctcatcagcac
catcaacaacagcaaccccagcagcagcagcagcagcaacaacaacaacaccaacagtat
ccggttgccacttcgcagtatcaggcggcggctgctgctgcagctgcagctgcggccgcg
gccgcgagcactatcggatacgcgcactcgcatccaggccatggccacggggaaacgggc
tccgagcacgcccccgtcagctgtgggaacggggacgggagtcggcatgggcatcgggtc
ggacagcaacaccagcaacagcaacgtcttataccaccctccgcaccaccaccaccctca
gcatcagcacgcggtgggatcatcagcgccgggaatgggcccaactgtccctcagattcc
aaaccggacgccgggagtcctttgctgtccatctctgaggtgactaacaccctgctcaac
caatag
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