Ceratina calcarata (carpenter bee): 108628282
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Entry
108628282 CDS
T06061
Name
(RefSeq) general transcription factor IIH subunit 3 isoform X1
KO
K03143
transcription initiation factor TFIIH subunit 3
Organism
ccal
Ceratina calcarata (carpenter bee)
Pathway
ccal03022
Basal transcription factors
ccal03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ccal00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
108628282
09124 Replication and repair
03420 Nucleotide excision repair
108628282
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccal03021
]
108628282
03400 DNA repair and recombination proteins [BR:
ccal03400
]
108628282
Transcription machinery [BR:
ccal03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
108628282
DNA repair and recombination proteins [BR:
ccal03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
108628282
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tfb4
THF_DHG_CYH
Motif
Other DBs
NCBI-GeneID:
108628282
NCBI-ProteinID:
XP_026672151
UniProt:
A0AAJ7S6E1
LinkDB
All DBs
Position
Unknown
AA seq
312 aa
AA seq
DB search
MSNEIDTSLLIIVLDVNPVQRIVKQETRILTQCLDSTIVFANAHLMQSSNNQLAVLACYS
HGAKFLYPCEKSSEIRQIDGQYEKFTMVERTIRQQLQQVINEISLDKPLNGESLMSGALT
MALCYVARLEREKVAGEKLHSRMLVITASNDSAIQYMNYMNIFFTAQKMGIILDVCSLDQ
DLTLLQQGCDITGGIYLKVPQLSGLLQYLLWIFLPDPNVRSKLVLPPPVKVDYRAACFCH
QELIDIGYVCSICLSIFCKFSPICTTCHIQNARTYTYENEEKEKEYRYSSLKLVIILPID
RIFYLNISIFSP
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaatgagatagatacgagcttattaataattgtgctagacgtaaatcccgtacaa
agaatcgtaaagcaagaaacaaggatattaacgcaatgtttagattctactatcgtcttc
gcgaatgcacatttgatgcaatcgtcgaacaatcaacttgctgtgctagcatgctatagc
catggagcaaaatttttatatccatgtgagaaatcatcagaaatcaggcaaattgatgga
caatatgaaaaatttactatggtagaacgtactataagacagcagttacaacaagtcatc
aatgaaatttctttggataaaccattgaatggagaaagcttaatgtctggcgcattaact
atggcattgtgttacgttgcaagattagaaagggaaaaggttgctggtgaaaagttgcat
tcaagaatgcttgtaattacagccagtaatgattcggcaatacaatatatgaactacatg
aacatattcttcactgcccaaaaaatggggataatattggacgtatgtagtttagatcaa
gatttgaccttgcttcaacagggctgtgatatcactggtggaatttacttaaaagtgcca
cagttaagtggattattacaatatttattgtggatatttttaccagatccaaacgttagg
tccaaattggtacttccaccacctgtgaaagtagattatagagcagcatgcttttgccat
caagagctcatagatattggctatgtatgctccatatgtctatcaatattctgtaaattc
agtccaatatgtacaacttgccatattcaaaatgccaggacctatacctatgaaaatgaa
gaaaaagaaaaagaatatagatatagttcactaaagcttgtaattatattaccgatagat
agaattttttatttaaatatatctattttctcaccatag
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integrated database retrieval system
