Ceratina calcarata (carpenter bee): 108628334
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Entry
108628334 CDS
T06061
Name
(RefSeq) vacuolar protein sorting-associated protein 8 homolog isoform X1
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
ccal
Ceratina calcarata (carpenter bee)
Pathway
ccal04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
ccal00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
108628334
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccal04131
]
108628334
Membrane trafficking [BR:
ccal04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
108628334
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_VPS8
TPR_Vps8
VPS8_N
WD40_CDC20-Fz
Beta-prop_WDR5
ANAPC4_WD40
zf_RING_Vps8_fungal
WDR55
zf_RING_Vps8
TPR_VPS8_2
Beta-prop_EML_2
Beta-prop_WDR3_1st
Beta-prop_THOC3
Beta-prop_WDR36-Utp21_1st
PQQ_2
Beta-prop_EML
TPR_Vps41
Beta-prop_WDR90_POC16_2nd
Prok-RING_1
Beta-prop_IP5PC_F
WD40_WDHD1_1st
Rtf2
zf-RING_Vps41
VPS18_RING_C
WD40
zf-RING_UBOX
EIF3I
Motif
Other DBs
NCBI-GeneID:
108628334
NCBI-ProteinID:
XP_017885654
UniProt:
A0AAJ7J653
LinkDB
All DBs
Position
Unknown
AA seq
1299 aa
AA seq
DB search
MAENGLGSDAGSQEFLAAEFANLEIEELDNTEYAIPAVEELPSLESILTEPDCGSLSGTE
DDFGPTAAEKLGSSETASVGSHLSLNSLNKSSRTSRPTSSGAILRHVILKGISSQIVSAS
DKVNAGLASAVAAGGNMLVVGTSHGLVLGFDSSQTLRWCDQEARHQGSVSALCFNHDGTR
VLAGFARGHILMIDSANGKVLRTLTDVHPVDTAVLHVKFTDSPKVALCSDSGGSVFELNF
TRVMGVRGCESRCLFSGSRGEVCTLEPLLLNYLPSHPLKTYTLVAMATLSKVIVVCIRPR
MRVVLTHPLIGAPIAPPQLSWQLVMIQAADASRMIDPVLALARDDIVYFYQVCTESSSRV
RLSPLRRMTLPYTISNLRWLNPRSLAVLDTQERLHLLDVRAQDNLETLDMSRVGISYASS
HFKGLSTGGNVSKAMALAGERACYNTVVTFGTQLLLLGTKSLHVVCIRTWTERLRHLTMQ
RRYPEALALGLAFYQDKGKAVVGLRGSRERRKQIARDRVCQVLVQYMEEELNHHGSGDEN
QDQEIVSICVDYSIQLENTEFLFGKLWDSVSECEGLKASYLKALEGPLLDGSLKPRLPPL
IAQQLVAFYDAEEKLEALQAIVVLLDVDCLDIHQVTTICRERGLWEALIHLQTTALGDFT
APIHQLVPVLQSGLTKDLPDRPSLGTIQLGNALLVYASCCLAGRGFPKDDLPENMSQRAK
ADVLRALLSQHSTCATDNERQYPYLRTLLRFDAKGFLDVMAIAFQEPEFTSEMGLRQRQR
LVDILISIAMPNTPLAPGSDDALREDQRNLVLVFVANELAENTVSLEPAVLNRMVETLCW
PGNEEARAERESAVLGLVAGRKLRNMADAVLLRLSEAANFYRVAEIVYSAREDWPQACRC
MLEHPARSHDVWPWLNQLEQSSLRAVVLANCTRLLRLDSHRLASLIAAHLREQLKEVFDA
LDEARSKYDLLDALYICAGQSKEEESLGFELDTEMLETFLELMCQFQPQRVVSHVRGVHG
CRPDEALRIVQRAEHRTAEAVVLEKLGNYQEAHEILSRELRDRMESYRKNEVNEEAVTRA
AGQVAGLCRRAAGNLDWMPLIETILEAHSNGREERVEKLCGRLLRVVLEFLGGSTALSTV
LEQILKHPLATSGTIGDIRQLLKGVLAHSRYEQTLVEATARLVSLELHEALKKSLRDAGR
ASGRVSIICHICRHLLSQCTNYVIAFNCGHGFHSECLGEAKSCYKCLNSKGWAPVVTHVT
RLNSYHESKQLLEPEFMTRSRELTLRLAPPSLPDLEGIF
NT seq
3900 nt
NT seq
+upstream
nt +downstream
nt
atggctgagaacgggctggggtcggacgccggctcacaggagtttcttgcggccgagttt
gccaacttagaaatcgaagagttggacaacacggagtatgctataccggcggtggaggag
ctgccctccttggagagcattctcaccgaacccgactgtggttcgctttcagggaccgag
gatgacttcggtccgacggcagcggagaagctgggaagcagtgagacagcgagcgttggt
agccacttgtcattgaactcgttgaacaaatcgagcaggacatcgagaccgacgtcttcc
ggagctattctgaggcatgtgatactcaaggggatctcctctcaaatcgtttcagccagt
gacaaggtgaacgccggcttggcgagcgcagtggcagcgggtgggaacatgctagtggtg
ggcacgagccacggcctggtcctaggtttcgactcctcgcaaactctacgatggtgcgac
caggaagcgcggcaccaaggctcggtctcggcgctctgtttcaaccacgacggcaccaga
gtgctagccggcttcgccagaggtcatatcctgatgatcgacagtgcgaacggaaaagtt
ttacggacgctcaccgacgtccatcccgtcgacactgccgtgctgcacgtcaaattcaca
gactcgccgaaggtcgcgctgtgcagcgacagcggcggctccgtgttcgaattaaacttc
acccgggtgatgggtgtcagaggctgcgagagcagatgcttgttcagcggctctcgaggc
gaagtctgcaccctggaaccgttgctcttaaactacttaccatctcatccattaaagacc
tacaccttagtagcgatggcgaccttatccaaggtgatcgtcgtttgcatcagaccgagg
atgcgagtagttttgacccaccctttaatcggcgccccaatagcaccgcctcagttatcc
tggcagctggtgatgatacaagcagccgacgcctcgcgaatgatcgacccggtgctcgcc
ttagcaagagatgacatcgtatatttctaccaagtgtgcaccgagtccagctcccgggtc
cgactctctcccttaagacgaatgacgctgccttacacgatcagcaatctacgctggcta
aacccgaggtcgttggccgtcctcgacacacaggaacggttgcatctactcgatgtcaga
gctcaggacaatctggagactctggacatgagcagggtcggtatatcttacgctagcagc
cattttaaaggcttgtcgaccggcgggaacgtttccaaggcgatggcactggctggagaa
cgggcctgttacaacaccgtcgtcaccttcggtacgcagctgttgttactcgggacgaag
agcttgcacgtcgtttgcatcaggacttggaccgagagactcagacatttgacgatgcag
aggcgttaccctgaagccttggcgctgggcctggcgttctatcaggacaaggggaaagct
gttgtggggctgagaggctcgagggagagaaggaagcagatagcccgggacagagtctgt
caggtactcgttcaatacatggaagaggaattgaatcatcatggatccggggacgagaac
caagatcaagagatcgtttcgatttgcgtggattattcgattcagttggagaacactgaa
ttcctgtttggtaaactgtgggattccgtgtctgagtgcgaaggattgaaggcgagctat
ttaaaagcgttggagggtcccctgttggatgggagtttaaaaccgaggctgccgccgttg
atcgcacagcagctcgtcgctttttacgacgcagaggagaagctcgaggcgcttcaagct
atcgttgttttactcgacgtcgactgtttggatattcatcaggtgacgacgatctgccgc
gagcgaggactctgggaagcgttaattcacctccagacaacggctcttggcgactttacg
gcaccgattcatcaattggtgcccgttcttcaatcgggattaacgaaggacttgcccgac
agaccctccctgggcacgattcaattaggcaacgcgcttctggtgtacgcgagctgctgt
ctggccggacgaggcttccccaaggacgatttgccggagaacatgtcgcagcgagctaaa
gcagacgtgctgagagctttattgtcgcaacactcaacttgtgctacggacaacgaacgg
caatacccttatttgaggactctgctcaggttcgacgcgaagggattcctggatgtgatg
gcaattgcgttccaggagcccgagttcacgtctgaaatggggctgcggcagagacagagg
ctcgtcgacattctgatcagcatagcaatgcctaacacgcctctggcaccgggcagcgac
gatgccctgcgcgaggatcagaggaatctcgtcctagtgtttgtcgccaacgaactggct
gagaatacggtcagtttggagccggcggtgctcaatagaatggtggagaccctctgttgg
ccgggcaacgaggaggccagggccgagagggagagcgcggtgctgggcctggttgctggg
aggaagctgaggaacatggcggacgccgtcctcctcaggctttcagaggcggccaacttc
taccgcgtggcggagatagtgtacagcgcgagggaggactggccgcaggcctgccgctgc
atgctggaacacccggcgcgctcgcacgacgtctggccctggctgaaccaactcgaacag
tcctcgctgcgagcagtggtccttgcgaattgtacgcggcttctacggctggattcccat
cggctggcctccttgattgcggcgcatttacgtgaacagctgaaagaagttttcgacgcg
ctggacgaggctcgttccaaatacgatctgctcgacgctttgtacatctgcgctggacag
tcaaaggaggaagagagcctcgggttcgaactggacaccgagatgctcgagacattcctg
gaattgatgtgccagttccaacctcaacgtgtggtgtctcatgtccgaggagtgcacggg
tgccggccagacgaggctttaaggatcgttcagagggccgagcataggaccgcggaggct
gtcgtgctggagaaactcgggaactatcaagaggcgcacgagatcctgtcgagggaactg
cgagaccgcatggaatcttaccgtaagaacgaggtgaacgaggaagcagtgacccgggca
gctggccaggtggccggtctctgcaggagagccgcggggaatctcgactggatgccgtta
atagaaacgatcctcgaggctcactcgaacggcagggaagaaagagtggaaaagctttgc
gggagattgttaagggtcgtcctggagttcctcggaggcagcacggcgctctccaccgtt
ttggaacaaattctcaagcacccgttggcaacgagcggcacgataggcgacatcaggcaa
ttgctaaaaggagtgctagctcattcacgctacgagcagactttggtggaggctacggcc
cgcctggttagcctggaactccacgaggcattaaagaagtctcttagggatgctggaaga
gcctcagggagagtctcaataatctgccacatatgcaggcatctgttgtcacagtgcacc
aactacgtgatagcgttcaactgcggccacgggtttcactcggagtgtctgggcgaggcg
aagtcctgttacaaatgcctcaatagtaaaggctgggcgccggtcgtcactcacgtgact
cgtctgaactcgtaccatgagagtaaacaattgttggagccggagtttatgacgagaagc
cgggaactgaccctgcgactggccccgccctcgctgccggacctcgagggaattttttaa
DBGET
integrated database retrieval system
